Click here to switch to the map view.

The map label for this gene is ygxB [H]

Identifier: 116688151

GI number: 116688151

Start: 137050

End: 138513

Strand: Direct

Name: ygxB [H]

Synonym: Bcen2424_0127

Alternate gene names: 116688151

Gene position: 137050-138513 (Clockwise)

Preceding gene: 116688149

Following gene: 116688152

Centisome position: 3.93

GC content: 68.24

Gene sequence:

>1464_bases
ATGGATGCTTCCAGCTTCATCACGTCGCTGCAGGCCACGCTAGGCGGATACCTGCCCAAGATCGCCGGCGCGATCGGCAT
CCTGGTGATCGGCTGGCTGATCGCCGTCGCGGTGCGGGCCGGTGCGCTCCGGCTGCTCAACGCGCTGAAGGTCGATCAGC
GGATCACCGACAGCACCGGCCAGGGCGCCTGCGTCGAACGCATCATCGCCAGCGGCCTGTTCTGGCTCGTGCTGCTCGTC
ACCGCGGTGGGCATCTTCAACGTGCTCAACCTGTACGCGGTCTCCAATCCGTTCTCGCTGCTCGTCACGCACATCGTCAA
CTACCTGCCGAACCTGATCGGCGGCGCGGCGCTGACGCTGATCGCATGGCTGATCGCGTCGCTGCTGCGCAGCCTCGCGA
ACCGCGCGCTGAAGGCGAGCAAGGTCGACGCCACGCTGTCCGAAAGCGCCGGCATGCAGCCGATGAGCGGCTATCTCGGC
GACGTGCTGTTCTGGCTCGTGATCCTGATGTTCCTGCCGGCGATCCTCGGCTCGTTCGCGCTGTCGGGCCTGCTGTCGCC
GGTGCAGGGGATGGTCGACAAGCTGCTCGCGATCGTGCCGAACATCTTCGCGGCCGCGGTGATCGGCTTCGTCGGCTGGG
TCGTCGCGCGCGTGCTGCGCGGCCTGGTGACGAACCTGCTGGTCGCCGCCGGCGCCGACCGCCTCACGCAAGGGATCGAC
AGCCCGACGCCCGTGCGCGTGTCGAGCCTGGTCGGCACCATCGTCTACGTGTTCGTGTTCGTGCCGACGCTGATCTCCGC
GCTCGACGCGCTGAAGATCGACGCGATCTCGATTCCCGCGACCAACATGCTGAACCAGTTCCTCGGCGCGGTGCCCGACA
TCGTCGCGGCGATCGTGATCGTGCTGGTCACGTTCTACTTCGCGCGCTTCGTCGCGTCGCTCGCGCAGAAGCTGCTGGAA
GCCGCCGGCGTCGACGGGCTGCCGGCCGTGCTCGGCGTCGAGCGCGTGTTCTCGGGCATCCTGCAGCCGTCGGTGCTGGT
CGCGCGACTGATCGTGTTCTTCGCGATGCTGTTCGCGTCGGTCGAAGCCGCGAACCGGCTCGGCTTCACGCAGGTGCGCG
ACGTCGTCACGCTGTTCATCGAATTCGGCGGCCACGTGCTGATGGGCGGCGTGATCCTCGTGATCGGCGTGTGGCTCGCG
GGCCTCGCGCGCCGCGTGATCGAGCAGGCCGACCGCGAGCACAGCGTGCTGTTCGCGCGGATCGCCCAGTTCGCGATCCT
CGGCCTTGTGTTCGCGATGGGGCTGCGCGCGATGGGCATCGCGAACGAAATCGTGCAGCTCGCGTTCGGCCTCGTGCTCG
GCGCGATCGCGGTGGCCGTTGCGCTGTCGTTCGGCCTCGGCGGCCGGGAAGCGGCCGGCAAGCTGCTCGACCGCTGGTTC
AACCAGCGCGGCGGCGGCCAGTAA

Upstream 100 bases:

>100_bases
TTCTCGGGTAAGTTGCCCGGACGGAGCAGCACGCTTTTCGAATTACGCAGGTCGTTCGTCGATGTTCAATCGCCACACCA
CGTTTTCGGGAGAAGAAGAA

Downstream 100 bases:

>100_bases
GGCCCGTCGGCACGGCCGATCCGGCCCGCATCGCGCGGGCCGGACCGGCGTGGCAACGGGCGCGGCGGGCGTTGCCGCGA
GCGGTACCGCAAGCGTTTCC

Product: TM helix repeat-containing protein

Products: NA

Alternate protein names: ORF1 [H]

Number of amino acids: Translated: 487; Mature: 487

Protein sequence:

>487_residues
MDASSFITSLQATLGGYLPKIAGAIGILVIGWLIAVAVRAGALRLLNALKVDQRITDSTGQGACVERIIASGLFWLVLLV
TAVGIFNVLNLYAVSNPFSLLVTHIVNYLPNLIGGAALTLIAWLIASLLRSLANRALKASKVDATLSESAGMQPMSGYLG
DVLFWLVILMFLPAILGSFALSGLLSPVQGMVDKLLAIVPNIFAAAVIGFVGWVVARVLRGLVTNLLVAAGADRLTQGID
SPTPVRVSSLVGTIVYVFVFVPTLISALDALKIDAISIPATNMLNQFLGAVPDIVAAIVIVLVTFYFARFVASLAQKLLE
AAGVDGLPAVLGVERVFSGILQPSVLVARLIVFFAMLFASVEAANRLGFTQVRDVVTLFIEFGGHVLMGGVILVIGVWLA
GLARRVIEQADREHSVLFARIAQFAILGLVFAMGLRAMGIANEIVQLAFGLVLGAIAVAVALSFGLGGREAAGKLLDRWF
NQRGGGQ

Sequences:

>Translated_487_residues
MDASSFITSLQATLGGYLPKIAGAIGILVIGWLIAVAVRAGALRLLNALKVDQRITDSTGQGACVERIIASGLFWLVLLV
TAVGIFNVLNLYAVSNPFSLLVTHIVNYLPNLIGGAALTLIAWLIASLLRSLANRALKASKVDATLSESAGMQPMSGYLG
DVLFWLVILMFLPAILGSFALSGLLSPVQGMVDKLLAIVPNIFAAAVIGFVGWVVARVLRGLVTNLLVAAGADRLTQGID
SPTPVRVSSLVGTIVYVFVFVPTLISALDALKIDAISIPATNMLNQFLGAVPDIVAAIVIVLVTFYFARFVASLAQKLLE
AAGVDGLPAVLGVERVFSGILQPSVLVARLIVFFAMLFASVEAANRLGFTQVRDVVTLFIEFGGHVLMGGVILVIGVWLA
GLARRVIEQADREHSVLFARIAQFAILGLVFAMGLRAMGIANEIVQLAFGLVLGAIAVAVALSFGLGGREAAGKLLDRWF
NQRGGGQ
>Mature_487_residues
MDASSFITSLQATLGGYLPKIAGAIGILVIGWLIAVAVRAGALRLLNALKVDQRITDSTGQGACVERIIASGLFWLVLLV
TAVGIFNVLNLYAVSNPFSLLVTHIVNYLPNLIGGAALTLIAWLIASLLRSLANRALKASKVDATLSESAGMQPMSGYLG
DVLFWLVILMFLPAILGSFALSGLLSPVQGMVDKLLAIVPNIFAAAVIGFVGWVVARVLRGLVTNLLVAAGADRLTQGID
SPTPVRVSSLVGTIVYVFVFVPTLISALDALKIDAISIPATNMLNQFLGAVPDIVAAIVIVLVTFYFARFVASLAQKLLE
AAGVDGLPAVLGVERVFSGILQPSVLVARLIVFFAMLFASVEAANRLGFTQVRDVVTLFIEFGGHVLMGGVILVIGVWLA
GLARRVIEQADREHSVLFARIAQFAILGLVFAMGLRAMGIANEIVQLAFGLVLGAIAVAVALSFGLGGREAAGKLLDRWF
NQRGGGQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008910 [H]

Pfam domain/function: PF05552 TM_helix [H]

EC number: NA

Molecular weight: Translated: 51224; Mature: 51224

Theoretical pI: Translated: 10.04; Mature: 10.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDASSFITSLQATLGGYLPKIAGAIGILVIGWLIAVAVRAGALRLLNALKVDQRITDSTG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
QGACVERIIASGLFWLVLLVTAVGIFNVLNLYAVSNPFSLLVTHIVNYLPNLIGGAALTL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
IAWLIASLLRSLANRALKASKVDATLSESAGMQPMSGYLGDVLFWLVILMFLPAILGSFA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSGLLSPVQGMVDKLLAIVPNIFAAAVIGFVGWVVARVLRGLVTNLLVAAGADRLTQGID
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCC
SPTPVRVSSLVGTIVYVFVFVPTLISALDALKIDAISIPATNMLNQFLGAVPDIVAAIVI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
VLVTFYFARFVASLAQKLLEAAGVDGLPAVLGVERVFSGILQPSVLVARLIVFFAMLFAS
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
VEAANRLGFTQVRDVVTLFIEFGGHVLMGGVILVIGVWLAGLARRVIEQADREHSVLFAR
HHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH
IAQFAILGLVFAMGLRAMGIANEIVQLAFGLVLGAIAVAVALSFGLGGREAAGKLLDRWF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
NQRGGGQ
HCCCCCC
>Mature Secondary Structure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HCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9579061; 9384377; 8144469 [H]