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The map label for this gene is gspD [H]

Identifier: 116688086

GI number: 116688086

Start: 61780

End: 64104

Strand: Reverse

Name: gspD [H]

Synonym: Bcen2424_0062

Alternate gene names: 116688086

Gene position: 64104-61780 (Counterclockwise)

Preceding gene: 116688089

Following gene: 116688085

Centisome position: 1.84

GC content: 66.58

Gene sequence:

>2325_bases
ATGACAAGAAATCGCTTCGTTATGCGGCGTATCGCCACGACCCTGCTCGTGGCAGGCATCATCGTCTCGCAGGCCGCCTA
CGCTCAGGTCACGCTCAATTTCGTGAATGCGGATATCGACCAGGTCGCGAAAGCGATCGGCGCCGCGACCGGCAAGACCA
TCATCGTCGACCCCCGCGTGAAGGGGCAGCTCAATCTCGTGGCCGAACGGCCGGTGCCGGAAGACCAGGCATTGAAGACG
CTGCAGTCGGCGCTGCGCATGCAGGGCTTCGCGCTCGTGCAGGATCACGGCGTGCTGAAGGTCGTGCCGGAAGCCGACGC
GAAGCTGCAGGGCGTGCCGACCTACATCGGCAATGCGCCGCAGGCGCGCGGCGACCAGGTGATCACGCAGGTGTTCGAGC
TGCACAACGAATCGGCGAACAACCTGCTGCCGGTGCTGCGGCCGCTGATCTCGCCGAACAACACGGTGACGGCCTACCCG
GCGAACAACACGATCGTCGTGACCGACTATGCGGACAACGTGCGCCGCATCGCGCAGATCATCGCGGGCGTCGACAGCGC
CGCGGGCGCGCAGGTGCAGGTCGTGCCGCTGCGCAACGCGAACGCGATCGACCTCGCCGCGCAACTGCAGAAAATGCTCG
ACCCGGGCGCGATCGGCAACAGCGACGCGACGCTGAAGGTATCGGTCACGGCCGACCCGCGCACCAACGCGCTGCTGCTG
CGTGCGTCGAACGCGTCGCGCCTCGCGGCCGCGAAGCGTCTCGTGCAGCAGCTCGACGCGCCGAGCGCGGTGCCCGGCAA
CATGCATGTCGTGCCGCTGCGCAACGCCGATGCGGTGAAGCTCGCGAAGACGCTGCGCGGGATGCTCGGCAAGGGCGGCA
ACGACAGCGGCTCGTCGGCGTCGTCCAACGATGCGAACAGCTTCAACCAGAACGGCGGCTCGTCGTCGAGCGGCAACTTC
TCGACCGGCACGTCGGGCACCCCGCCGCTGCCGTCGGGCGGCCTGGGCAGTTCGTCGTCGTCGTCCGGGTATGGCGGCGG
CTCGTCCGGCGGTGGCCTCGGTACCGGCGGCCTGCTCGGCGGTGACAAGGACAAGAGCGGCGACGACAACCAGCCGGGCG
GGATGATCCAGGCCGACTCGGCCACCAACTCGCTGATCATCACCGCGTCCGATCCGGTGTACCGGAACCTGCGCTCGGTG
ATCGACCAGCTCGACGCACGGCGTGCGCAGGTCTATATCGAAGCGCTGATCGTCGAGCTCAACTCGAATACGTCCGGCAA
CCTCGGCATCCAGTGGCAGGTGGCGAGCGGCCAGTTCCTCGGCGGTACGAACCTGAATCCCACGGGCGGTTTGGGCAACA
GCATCATCAACCTGACGACGGGCGGCACGGCGGCCACCGCCGGGTTGGCCGCCAATCTCGCGAACCTGAACCAGGGCCTC
AACATCGGCTGGTTGCACAACATGTTCGGCGTGCAGGGGCTCGGCGCGCTGCTGCAGTATTTTGCGGGCGTGAGCGACGC
GAACGTGCTGTCGACGCCGAACCTGATCACGCTCGACAACGAGGAAGCGAAGATCGTCGTCGGCCAGAACGTGCCGATCG
CGACCGGTTCGTATTCGAACCTGACGAGCGGCACGACGAGCAACGCGTTCAACACCTACGACCGTCGCGACGTCGGCCTG
ACGCTGCACGTGAAGCCGCAGATCACCGACGGCGGGATCCTGAAGCTGCAGCTCTATACCGAGGATTCGGCGGTCGTCGC
CGGCACGACGAACGCGCAGACCGGCCCGACCTTCACGAAACGCTCGATCCAGTCGACGATCCTGGCCGACAACGGCGAGA
TCATCGTGCTCGGCGGCTTGATGCAGGACAACTACCAGGTGTCGAACAGCAAGGTGCCGCTGCTCGGCGACATCCCGTGG
ATTGGCCAGTTGTTCCGCTCCGAAACGAAGCAGCGCGCGAAAACCAACCTGATGGTGTTCCTGCGCCCGGTGATCATTTC
CGATCGCAGCACCGCGCAGGCAGTCACCGCGAACCGCTACGACTACATCCAGGGCGTGACGGGCGCCTACAAGTCGGACA
ACAACGTGATGCGCGACAAGGACGACCCGGTCGTCCCGCCGATGCCGCTGGGTCCGAGCCAGGGCGGCACGCCGGCCGGC
AATCTGTTCGATCTCGACAAGATGCGTCGCCAGCAGTTGCAGCGCCAGGTGGTGCCCGTGCCTGCCCAGCCATTGCCGGA
AGCAACGCCCGCGCAGCCGCAAAGCGTGCCGCAGCAGGCGGTGCCGCAACAGCCGCTGACCACCGCGCCGGGAGCCTCGC
AGTGA

Upstream 100 bases:

>100_bases
GATATTTCGGACATGAAAAACTGCTAATGTCGCCTCTTTCGGACTTGGATCCCAGCACTACCGCCGGAAGTGGCCTGAGC
CGGCATCGACCCATTCATCC

Downstream 100 bases:

>100_bases
GCGACGTGCTCGCGTCCTCCGCCCACGACGGCGCGCCGGGCGAACGCCAGCCGCCGTCGCCGCTCGCCGCGCGCCTGCTG
CCGTACGGCTTCGCGAAGAG

Product: general secretion pathway protein D

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 774; Mature: 773

Protein sequence:

>774_residues
MTRNRFVMRRIATTLLVAGIIVSQAAYAQVTLNFVNADIDQVAKAIGAATGKTIIVDPRVKGQLNLVAERPVPEDQALKT
LQSALRMQGFALVQDHGVLKVVPEADAKLQGVPTYIGNAPQARGDQVITQVFELHNESANNLLPVLRPLISPNNTVTAYP
ANNTIVVTDYADNVRRIAQIIAGVDSAAGAQVQVVPLRNANAIDLAAQLQKMLDPGAIGNSDATLKVSVTADPRTNALLL
RASNASRLAAAKRLVQQLDAPSAVPGNMHVVPLRNADAVKLAKTLRGMLGKGGNDSGSSASSNDANSFNQNGGSSSSGNF
STGTSGTPPLPSGGLGSSSSSSGYGGGSSGGGLGTGGLLGGDKDKSGDDNQPGGMIQADSATNSLIITASDPVYRNLRSV
IDQLDARRAQVYIEALIVELNSNTSGNLGIQWQVASGQFLGGTNLNPTGGLGNSIINLTTGGTAATAGLAANLANLNQGL
NIGWLHNMFGVQGLGALLQYFAGVSDANVLSTPNLITLDNEEAKIVVGQNVPIATGSYSNLTSGTTSNAFNTYDRRDVGL
TLHVKPQITDGGILKLQLYTEDSAVVAGTTNAQTGPTFTKRSIQSTILADNGEIIVLGGLMQDNYQVSNSKVPLLGDIPW
IGQLFRSETKQRAKTNLMVFLRPVIISDRSTAQAVTANRYDYIQGVTGAYKSDNNVMRDKDDPVVPPMPLGPSQGGTPAG
NLFDLDKMRRQQLQRQVVPVPAQPLPEATPAQPQSVPQQAVPQQPLTTAPGASQ

Sequences:

>Translated_774_residues
MTRNRFVMRRIATTLLVAGIIVSQAAYAQVTLNFVNADIDQVAKAIGAATGKTIIVDPRVKGQLNLVAERPVPEDQALKT
LQSALRMQGFALVQDHGVLKVVPEADAKLQGVPTYIGNAPQARGDQVITQVFELHNESANNLLPVLRPLISPNNTVTAYP
ANNTIVVTDYADNVRRIAQIIAGVDSAAGAQVQVVPLRNANAIDLAAQLQKMLDPGAIGNSDATLKVSVTADPRTNALLL
RASNASRLAAAKRLVQQLDAPSAVPGNMHVVPLRNADAVKLAKTLRGMLGKGGNDSGSSASSNDANSFNQNGGSSSSGNF
STGTSGTPPLPSGGLGSSSSSSGYGGGSSGGGLGTGGLLGGDKDKSGDDNQPGGMIQADSATNSLIITASDPVYRNLRSV
IDQLDARRAQVYIEALIVELNSNTSGNLGIQWQVASGQFLGGTNLNPTGGLGNSIINLTTGGTAATAGLAANLANLNQGL
NIGWLHNMFGVQGLGALLQYFAGVSDANVLSTPNLITLDNEEAKIVVGQNVPIATGSYSNLTSGTTSNAFNTYDRRDVGL
TLHVKPQITDGGILKLQLYTEDSAVVAGTTNAQTGPTFTKRSIQSTILADNGEIIVLGGLMQDNYQVSNSKVPLLGDIPW
IGQLFRSETKQRAKTNLMVFLRPVIISDRSTAQAVTANRYDYIQGVTGAYKSDNNVMRDKDDPVVPPMPLGPSQGGTPAG
NLFDLDKMRRQQLQRQVVPVPAQPLPEATPAQPQSVPQQAVPQQPLTTAPGASQ
>Mature_773_residues
TRNRFVMRRIATTLLVAGIIVSQAAYAQVTLNFVNADIDQVAKAIGAATGKTIIVDPRVKGQLNLVAERPVPEDQALKTL
QSALRMQGFALVQDHGVLKVVPEADAKLQGVPTYIGNAPQARGDQVITQVFELHNESANNLLPVLRPLISPNNTVTAYPA
NNTIVVTDYADNVRRIAQIIAGVDSAAGAQVQVVPLRNANAIDLAAQLQKMLDPGAIGNSDATLKVSVTADPRTNALLLR
ASNASRLAAAKRLVQQLDAPSAVPGNMHVVPLRNADAVKLAKTLRGMLGKGGNDSGSSASSNDANSFNQNGGSSSSGNFS
TGTSGTPPLPSGGLGSSSSSSGYGGGSSGGGLGTGGLLGGDKDKSGDDNQPGGMIQADSATNSLIITASDPVYRNLRSVI
DQLDARRAQVYIEALIVELNSNTSGNLGIQWQVASGQFLGGTNLNPTGGLGNSIINLTTGGTAATAGLAANLANLNQGLN
IGWLHNMFGVQGLGALLQYFAGVSDANVLSTPNLITLDNEEAKIVVGQNVPIATGSYSNLTSGTTSNAFNTYDRRDVGLT
LHVKPQITDGGILKLQLYTEDSAVVAGTTNAQTGPTFTKRSIQSTILADNGEIIVLGGLMQDNYQVSNSKVPLLGDIPWI
GQLFRSETKQRAKTNLMVFLRPVIISDRSTAQAVTANRYDYIQGVTGAYKSDNNVMRDKDDPVVPPMPLGPSQGGTPAGN
LFDLDKMRRQQLQRQVVPVPAQPLPEATPAQPQSVPQQAVPQQPLTTAPGASQ

Specific function: Involved in a general secretion pathway (GSP) for the export of proteins [H]

COG id: COG1450

COG function: function code NU; Type II secretory pathway, component PulD

Gene ontology:

Cell location: Cell outer membrane (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP D family [H]

Homologues:

Organism=Escherichia coli, GI87082242, Length=507, Percent_Identity=33.5305719921105, Blast_Score=216, Evalue=3e-57,
Organism=Escherichia coli, GI1789793, Length=297, Percent_Identity=28.2828282828283, Blast_Score=100, Evalue=4e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001775
- InterPro:   IPR005644
- InterPro:   IPR004846
- InterPro:   IPR013356
- InterPro:   IPR004845 [H]

Pfam domain/function: PF00263 Secretin; PF03958 Secretin_N [H]

EC number: NA

Molecular weight: Translated: 80716; Mature: 80585

Theoretical pI: Translated: 8.95; Mature: 8.95

Prosite motif: PS00627 GHMP_KINASES_ATP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRNRFVMRRIATTLLVAGIIVSQAAYAQVTLNFVNADIDQVAKAIGAATGKTIIVDPRV
CCCCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCHHHHHHHHHCCCCCEEEECCCC
KGQLNLVAERPVPEDQALKTLQSALRMQGFALVQDHGVLKVVPEADAKLQGVPTYIGNAP
CCEEEEEECCCCCHHHHHHHHHHHHHHCCEEEEECCCEEEEECCCCCCCCCCCHHHCCCC
QARGDQVITQVFELHNESANNLLPVLRPLISPNNTVTAYPANNTIVVTDYADNVRRIAQI
CCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCEEEEECCCCEEEEECCHHHHHHHHHH
IAGVDSAAGAQVQVVPLRNANAIDLAAQLQKMLDPGAIGNSDATLKVSVTADPRTNALLL
HHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCEEEE
RASNASRLAAAKRLVQQLDAPSAVPGNMHVVPLRNADAVKLAKTLRGMLGKGGNDSGSSA
EECCCHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCC
SSNDANSFNQNGGSSSSGNFSTGTSGTPPLPSGGLGSSSSSSGYGGGSSGGGLGTGGLLG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GDKDKSGDDNQPGGMIQADSATNSLIITASDPVYRNLRSVIDQLDARRAQVYIEALIVEL
CCCCCCCCCCCCCCEEEECCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHEEEEEEEEEE
NSNTSGNLGIQWQVASGQFLGGTNLNPTGGLGNSIINLTTGGTAATAGLAANLANLNQGL
CCCCCCCEEEEEEECCCCEECCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCC
NIGWLHNMFGVQGLGALLQYFAGVSDANVLSTPNLITLDNEEAKIVVGQNVPIATGSYSN
CCHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCEEEECCCCEEEEECCCCCEECCCCCC
LTSGTTSNAFNTYDRRDVGLTLHVKPQITDGGILKLQLYTEDSAVVAGTTNAQTGPTFTK
CCCCCCCCCCCCCCCCCCCEEEEEECEECCCCEEEEEEEECCCEEEEECCCCCCCCCHHH
RSIQSTILADNGEIIVLGGLMQDNYQVSNSKVPLLGDIPWIGQLFRSETKQRAKTNLMVF
HHHHHHEEECCCCEEEEECEECCCEEECCCCCCEEECCHHHHHHHHHHHHHHHHCCEEEE
LRPVIISDRSTAQAVTANRYDYIQGVTGAYKSDNNVMRDKDDPVVPPMPLGPSQGGTPAG
EEEEEECCCCHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
NLFDLDKMRRQQLQRQVVPVPAQPLPEATPAQPQSVPQQAVPQQPLTTAPGASQ
CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCC
>Mature Secondary Structure 
TRNRFVMRRIATTLLVAGIIVSQAAYAQVTLNFVNADIDQVAKAIGAATGKTIIVDPRV
CCCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCHHHHHHHHHCCCCCEEEECCCC
KGQLNLVAERPVPEDQALKTLQSALRMQGFALVQDHGVLKVVPEADAKLQGVPTYIGNAP
CCEEEEEECCCCCHHHHHHHHHHHHHHCCEEEEECCCEEEEECCCCCCCCCCCHHHCCCC
QARGDQVITQVFELHNESANNLLPVLRPLISPNNTVTAYPANNTIVVTDYADNVRRIAQI
CCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCEEEEECCCCEEEEECCHHHHHHHHHH
IAGVDSAAGAQVQVVPLRNANAIDLAAQLQKMLDPGAIGNSDATLKVSVTADPRTNALLL
HHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCEEEE
RASNASRLAAAKRLVQQLDAPSAVPGNMHVVPLRNADAVKLAKTLRGMLGKGGNDSGSSA
EECCCHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCC
SSNDANSFNQNGGSSSSGNFSTGTSGTPPLPSGGLGSSSSSSGYGGGSSGGGLGTGGLLG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GDKDKSGDDNQPGGMIQADSATNSLIITASDPVYRNLRSVIDQLDARRAQVYIEALIVEL
CCCCCCCCCCCCCCEEEECCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHEEEEEEEEEE
NSNTSGNLGIQWQVASGQFLGGTNLNPTGGLGNSIINLTTGGTAATAGLAANLANLNQGL
CCCCCCCEEEEEEECCCCEECCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCC
NIGWLHNMFGVQGLGALLQYFAGVSDANVLSTPNLITLDNEEAKIVVGQNVPIATGSYSN
CCHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCEEEECCCCEEEEECCCCCEECCCCCC
LTSGTTSNAFNTYDRRDVGLTLHVKPQITDGGILKLQLYTEDSAVVAGTTNAQTGPTFTK
CCCCCCCCCCCCCCCCCCCEEEEEECEECCCCEEEEEEEECCCEEEEECCCCCCCCCHHH
RSIQSTILADNGEIIVLGGLMQDNYQVSNSKVPLLGDIPWIGQLFRSETKQRAKTNLMVF
HHHHHHEEECCCCEEEEECEECCCEEECCCCCCEEECCHHHHHHHHHHHHHHHHCCEEEE
LRPVIISDRSTAQAVTANRYDYIQGVTGAYKSDNNVMRDKDDPVVPPMPLGPSQGGTPAG
EEEEEECCCCHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
NLFDLDKMRRQQLQRQVVPVPAQPLPEATPAQPQSVPQQAVPQQPLTTAPGASQ
CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]