| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is 116688080
Identifier: 116688080
GI number: 116688080
Start: 56973
End: 57374
Strand: Reverse
Name: 116688080
Synonym: Bcen2424_0056
Alternate gene names: NA
Gene position: 57374-56973 (Counterclockwise)
Preceding gene: 116688081
Following gene: 116688079
Centisome position: 1.65
GC content: 69.65
Gene sequence:
>402_bases ATGCGTCGTCGCCTGCCCTTCCCCGTTTCTTCCGCCCGCGGCTTCACGATGATCGAGGTGCTGGTCGCGCTCGCGATCAT CGCGGTCGCGCTCGCCGCGTCGATCCGCGCGGTCGGCACGATGGCGACCAACGCATCCGAGCTGCATCGCCGCCTGCTGG CCGGCTGGAGCGCCGACAACGCGCTCGCGCAGCTGCGGCTCACGCATGCGTGGCCGGAGGTCGGCGAACAGAGTTTCGAC TGCTCGCAAGGCAACGTGCAGCTCGTCTGCACGCAGCGCGTGAGCACCACGCCGAATCCGGTGTTCCGGCGCGTGCGGAT CTCGGTGAGCATGCCCGGCCGCGCCGGCGTGCTCGCGCAGATGGTGACGGTGGTCGCGAATGAAACCAGCCGTCCGCTCT GA
Upstream 100 bases:
>100_bases CCGAGAGCATCGACACGCCGGTGCGCGTGACGCTGCATTCGGCCGCCGGCAGCGCGACGATCATCGGCACCGGCAACGGC CGCTACGAGGTGCAATGACG
Downstream 100 bases:
>100_bases CGCGCCGATGCGACGCCCGTCCGCCCTCTCGTCCCGCGCTGCCCGCGGCTTCACGCTGATCGAGCTGATGATCGCGATCG CGATCATCGCGGTGGTGGCG
Product: general secretion pathway protein I
Products: NA
Alternate protein names: Type II Secretory Pathway Pseudopilin PulG; General Secretory Pathway I Transmembrane Protein
Number of amino acids: Translated: 133; Mature: 133
Protein sequence:
>133_residues MRRRLPFPVSSARGFTMIEVLVALAIIAVALAASIRAVGTMATNASELHRRLLAGWSADNALAQLRLTHAWPEVGEQSFD CSQGNVQLVCTQRVSTTPNPVFRRVRISVSMPGRAGVLAQMVTVVANETSRPL
Sequences:
>Translated_133_residues MRRRLPFPVSSARGFTMIEVLVALAIIAVALAASIRAVGTMATNASELHRRLLAGWSADNALAQLRLTHAWPEVGEQSFD CSQGNVQLVCTQRVSTTPNPVFRRVRISVSMPGRAGVLAQMVTVVANETSRPL >Mature_133_residues MRRRLPFPVSSARGFTMIEVLVALAIIAVALAASIRAVGTMATNASELHRRLLAGWSADNALAQLRLTHAWPEVGEQSFD CSQGNVQLVCTQRVSTTPNPVFRRVRISVSMPGRAGVLAQMVTVVANETSRPL
Specific function: Unknown
COG id: COG2165
COG function: function code NU; Type II secretory pathway, pseudopilin PulG
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14367; Mature: 14367
Theoretical pI: Translated: 12.10; Mature: 12.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRRLPFPVSSARGFTMIEVLVALAIIAVALAASIRAVGTMATNASELHRRLLAGWSADN CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCH ALAQLRLTHAWPEVGEQSFDCSQGNVQLVCTQRVSTTPNPVFRRVRISVSMPGRAGVLAQ HHHHHHHHHCCHHHCCCCCCCCCCCEEEEEECCCCCCCCHHEEEEEEEEECCCCHHHHHH MVTVVANETSRPL HHHHHHCCCCCCC >Mature Secondary Structure MRRRLPFPVSSARGFTMIEVLVALAIIAVALAASIRAVGTMATNASELHRRLLAGWSADN CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCH ALAQLRLTHAWPEVGEQSFDCSQGNVQLVCTQRVSTTPNPVFRRVRISVSMPGRAGVLAQ HHHHHHHHHCCHHHCCCCCCCCCCCEEEEEECCCCCCCCHHEEEEEEEEECCCCHHHHHH MVTVVANETSRPL HHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA