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The map label for this gene is fecI [C]

Identifier: 116688043

GI number: 116688043

Start: 22304

End: 23185

Strand: Reverse

Name: fecI [C]

Synonym: Bcen2424_0019

Alternate gene names: 116688043

Gene position: 23185-22304 (Counterclockwise)

Preceding gene: 116688044

Following gene: 116688041

Centisome position: 0.67

GC content: 67.35

Gene sequence:

>882_bases
ATGCCGAACCTCGACCCGGCCAGCCGCCGCGCCGAAGAACAAGCCGACGCGGCGGCGAGCTTCGATCCGCTGCGTCGCAC
GCTGATCCGCGTCGCGTACCGGATGCTCGGTTCCGTCGCGGATGCCGAGGACATGGTGCAGGAGGCGTTCATCCGCTGGA
TGGACGTCGACCGTACCGAGATACGCGTGCCCGAGGCGTTCCTGCGCCGCATGGTGATGCGCATGTGCCTCGACCAGCTG
AAATCCGCGCGGCACCAGCGCGAGACCTATATCGGCCCGTGGCTGCCCGAGCCGGTCGTCGAGGAAGACGAACCGGACGA
CGTCACGCTGCCGCTGCTGCTCGCGCTCGAACGGCTCTCGCCGCTCGAACGCGCGGCGTTCCTGCTGCACGACGTGTTCG
GCCTCGAATTCGACGAAGTCGCCACGACGATCCAGCGCGACCCGGCCGCGTGCCGGCAGCTCGCCGCACGAGCCCGCACG
CACGTGCGCGACGCGCGACCGCGTTTTCATGTCGAGAAGCAGCGCGGGATCGAACTGGCCGAAGCGTTTTTCGCGGCGTC
ACGCAGCGGCGACATGCGCGCACTCGGCGCGATGCTCGCCGAGGACGTGAGCCTGCATTCCGACGGCGGCGGCAAGCGCA
CGGCGGCCGGCAAGCCGGTATTCGGCTTCGAGCTTGTGATGCGGGTGCATGCGTACCTGGCCGAGCTGTTCGCGACGCAT
GCGTCGAAGCTCGTGCGGGCCGGGTTCATCAACGGGCTGCCGGGTTTCATCACGCTCGAAGCCGACGGCGAGCTGCAGAC
GACTGCGCTCGAGATCGACGACGGCAAGATCGTCGCGATCTATGTCGTGCGGAATCCTGACAAATTGAAGCATCTGCATT
GA

Upstream 100 bases:

>100_bases
TGATCAACGTGATCAACGGCTGGAACCGGCTCGCCGTCGGCTTCGGGCTGTGGGTCGACCCGGCCGACGCGAAGGCCGCC
GCCGCGAAGATGGTGGCTTG

Downstream 100 bases:

>100_bases
GGGCCGCGCGAGCATGCGCCGGGTGCGACGTGCGATATGAATGCATGGCGCCGTCCGCTCTCTTCTTTCTGCCCTGCGTT
TGCCGATCGCCGGCTACCGC

Product: RNA polymerase sigma factor SigJ

Products: NA

Alternate protein names: ECF Subfamily RNA Polymerase Sigma-24 Subunit; ECF Subfamily RNA Polymerase Sigma-24 Factor; RNA Polymerase Sigma Factor SigJ; Sigma Factor; RNA Polymerase ECF-Subfamily Sigma Factor; ECF Subfamily RNA Polymerase Sigma Factor; RNA Polymerase Sigma-70 Factor ECF Subfamily; RNA Polymerase Sigma Factor; Sigma-; RNA Polymerase Sigma-70 Factor; ECF-Sigma Factor; ECF Family RNA Polymerase Sigma Factor; Sigma-70 Region 2 Domain-Containing Protein; Sigma Factor Sigma; RNA Polymerase Sigma Factor Sigma-70 Family; RNA Polymerase Sigma Factor Sigma-70 Family Protein; AlteRNAtive RNA Polymerase Sigma Factor; ECF-Family Protein RNA Polymerase Sigma Factor; AlteRNAtive RNA Polymerase Sigma Factor SigJ; Sigma-70 Family RNA Polymerase Sigma Factor; RNA Polymerase; Sigma-70 Factor; RNA Polymerase ECF-Type Sigma Factor; RNA Polymerase Sigma Subunit ECF Family; RNA Polymerase Sigma-24 Subunit; RNA Polymerase Sigma-70 Factor Family; RNA Polymerase Sigma-70-Like Factor; ECF-Type Sigma Factor; RNA Polymerase Sigma-70 ECF Type; ECF Subfamily RNA Polymerase Sigma-; RNA Polymerase Sigma-70 Factor Protein; DNA-Directed RNA Polymeracialized Sigma Subunit

Number of amino acids: Translated: 293; Mature: 292

Protein sequence:

>293_residues
MPNLDPASRRAEEQADAAASFDPLRRTLIRVAYRMLGSVADAEDMVQEAFIRWMDVDRTEIRVPEAFLRRMVMRMCLDQL
KSARHQRETYIGPWLPEPVVEEDEPDDVTLPLLLALERLSPLERAAFLLHDVFGLEFDEVATTIQRDPAACRQLAARART
HVRDARPRFHVEKQRGIELAEAFFAASRSGDMRALGAMLAEDVSLHSDGGGKRTAAGKPVFGFELVMRVHAYLAELFATH
ASKLVRAGFINGLPGFITLEADGELQTTALEIDDGKIVAIYVVRNPDKLKHLH

Sequences:

>Translated_293_residues
MPNLDPASRRAEEQADAAASFDPLRRTLIRVAYRMLGSVADAEDMVQEAFIRWMDVDRTEIRVPEAFLRRMVMRMCLDQL
KSARHQRETYIGPWLPEPVVEEDEPDDVTLPLLLALERLSPLERAAFLLHDVFGLEFDEVATTIQRDPAACRQLAARART
HVRDARPRFHVEKQRGIELAEAFFAASRSGDMRALGAMLAEDVSLHSDGGGKRTAAGKPVFGFELVMRVHAYLAELFATH
ASKLVRAGFINGLPGFITLEADGELQTTALEIDDGKIVAIYVVRNPDKLKHLH
>Mature_292_residues
PNLDPASRRAEEQADAAASFDPLRRTLIRVAYRMLGSVADAEDMVQEAFIRWMDVDRTEIRVPEAFLRRMVMRMCLDQLK
SARHQRETYIGPWLPEPVVEEDEPDDVTLPLLLALERLSPLERAAFLLHDVFGLEFDEVATTIQRDPAACRQLAARARTH
VRDARPRFHVEKQRGIELAEAFFAASRSGDMRALGAMLAEDVSLHSDGGGKRTAAGKPVFGFELVMRVHAYLAELFATHA
SKLVRAGFINGLPGFITLEADGELQTTALEIDDGKIVAIYVVRNPDKLKHLH

Specific function: Sigma Factors Are Initiation Factors That Promote The Attachment Of RNA Polymerase To Specific Initiation Sites And Are Then Released. This Sigma Factor Regulates The Fec Genes For Iron Dicitrate Transport (Probable). [C]

COG id: COG1595

COG function: function code K; DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32852; Mature: 32721

Theoretical pI: Translated: 5.85; Mature: 5.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPNLDPASRRAEEQADAAASFDPLRRTLIRVAYRMLGSVADAEDMVQEAFIRWMDVDRTE
CCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHH
IRVPEAFLRRMVMRMCLDQLKSARHQRETYIGPWLPEPVVEEDEPDDVTLPLLLALERLS
EECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHC
PLERAAFLLHDVFGLEFDEVATTIQRDPAACRQLAARARTHVRDARPRFHVEKQRGIELA
HHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
EAFFAASRSGDMRALGAMLAEDVSLHSDGGGKRTAAGKPVFGFELVMRVHAYLAELFATH
HHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
ASKLVRAGFINGLPGFITLEADGELQTTALEIDDGKIVAIYVVRNPDKLKHLH
HHHHHHHHHHCCCCCEEEEECCCCEEEEEEEECCCCEEEEEEEECCHHHCCCC
>Mature Secondary Structure 
PNLDPASRRAEEQADAAASFDPLRRTLIRVAYRMLGSVADAEDMVQEAFIRWMDVDRTE
CCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHH
IRVPEAFLRRMVMRMCLDQLKSARHQRETYIGPWLPEPVVEEDEPDDVTLPLLLALERLS
EECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHC
PLERAAFLLHDVFGLEFDEVATTIQRDPAACRQLAARARTHVRDARPRFHVEKQRGIELA
HHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
EAFFAASRSGDMRALGAMLAEDVSLHSDGGGKRTAAGKPVFGFELVMRVHAYLAELFATH
HHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
ASKLVRAGFINGLPGFITLEADGELQTTALEIDDGKIVAIYVVRNPDKLKHLH
HHHHHHHHHHCCCCCEEEEECCCCEEEEEEEECCCCEEEEEEEECCHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA