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The map label for this gene is 116688032

Identifier: 116688032

GI number: 116688032

Start: 9607

End: 9924

Strand: Direct

Name: 116688032

Synonym: Bcen2424_0008

Alternate gene names: NA

Gene position: 9607-9924 (Clockwise)

Preceding gene: 116688031

Following gene: 116688035

Centisome position: 0.28

GC content: 64.15

Gene sequence:

>318_bases
ATGACCGAACGTGCCATGGGTGTTACCCGGGCCTGCGGGCTGGTAGGGATTTCGCGCTCGCTGTTCCACTACGAATCACG
CCGCCGAGTTGATGACGAAGCGCTGACTGGCCGGATGATGGCCATCGCCGCGCAGAAGCGCCGCTACGGCTATCGCCGGA
TTCACGTGCTGTTGCAGCGGGATGGCTGCTTCGCCAACCACAAGCGCATCTGGCGCCTGTACAGCAAGGCGGGGCTGAGC
GTGCGCAAGCGGCGACGCAAGCGTATTGCGGCTGTCGAGCGCACGCCGCTGCCGTTAGCTATTCGGCACGAAGTGTGA

Upstream 100 bases:

>100_bases
GCCTGTTGGCCGAATCAATGCTCGACAACGCCGCGCTGAAGGACCTGCTGGCTCGAAAGTAGCAAGCCCGCAGGCCAAGC
GCGAAGCGGTCCGGATATTG

Downstream 100 bases:

>100_bases
TCTACGTCGAGCACACCACACATTTCCACCGCGCCAATGCAAAAACCCCCGCCTTTCGGGCGGGGGTTCTTGGCTTGAGG
GAGCCTGACGATTACCTACT

Product: putative insertion element protein

Products: NA

Alternate protein names: ORF1 [H]

Number of amino acids: Translated: 105; Mature: 104

Protein sequence:

>105_residues
MTERAMGVTRACGLVGISRSLFHYESRRRVDDEALTGRMMAIAAQKRRYGYRRIHVLLQRDGCFANHKRIWRLYSKAGLS
VRKRRRKRIAAVERTPLPLAIRHEV

Sequences:

>Translated_105_residues
MTERAMGVTRACGLVGISRSLFHYESRRRVDDEALTGRMMAIAAQKRRYGYRRIHVLLQRDGCFANHKRIWRLYSKAGLS
VRKRRRKRIAAVERTPLPLAIRHEV
>Mature_104_residues
TERAMGVTRACGLVGISRSLFHYESRRRVDDEALTGRMMAIAAQKRRYGYRRIHVLLQRDGCFANHKRIWRLYSKAGLSV
RKRRRKRIAAVERTPLPLAIRHEV

Specific function: Unknown

COG id: COG2801

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 12320; Mature: 12189

Theoretical pI: Translated: 12.13; Mature: 12.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTERAMGVTRACGLVGISRSLFHYESRRRVDDEALTGRMMAIAAQKRRYGYRRIHVLLQR
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHEEHHC
DGCFANHKRIWRLYSKAGLSVRKRRRKRIAAVERTPLPLAIRHEV
CCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCEEEECCC
>Mature Secondary Structure 
TERAMGVTRACGLVGISRSLFHYESRRRVDDEALTGRMMAIAAQKRRYGYRRIHVLLQR
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHEEHHC
DGCFANHKRIWRLYSKAGLSVRKRRRKRIAAVERTPLPLAIRHEV
CCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1718819 [H]