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The map label for this gene is 116626938

Identifier: 116626938

GI number: 116626938

Start: 9925350

End: 9925940

Strand: Direct

Name: 116626938

Synonym: Acid_7915

Alternate gene names: NA

Gene position: 9925350-9925940 (Clockwise)

Preceding gene: 116626937

Following gene: 116626939

Centisome position: 99.6

GC content: 66.16

Gene sequence:

>591_bases
ATGGGCCAAGCCGAGGCAGGGGAAGTAACGCGCTTGCTTCAATCGTGGAGCCGCGGCGAGAAGCAGGCCCTCAACGAATT
GGTGCCGCTGGTTTACCGCGAACTGCGCCGGCTCGCCGCAGCCTACATCCGGCGCGAGCGTCCCGACCACACGCTGCAGC
CGACCGGACTGGTGCACGAAGCATACCTGAGGCTGATCGAGCAGACGCAGGTGGAATGCCTGGATCGGGCGAAGTTCTTC
ATCGTCGCGGCCAACCTGATGCGCCAGATTCTGGTGGATCACGCGAGGCGTCGCCTGGCGGGCAAGCGGGGCGGAGGGAA
TCAGGTAGTCCTGGACGAGGCCGCCGGCGCCTTCCGAGAAGACGCGGTGGACCTGGTGGAACTGGATCAGGCATTGCAGA
GGCTGGCCCGGTTGGATGCGCGGCAAGGCCGCGTGGTGGAACTGAGGTTCTTCCTCGGCCTGACGGAAGACGAGATCGCG
GATATTCTGGATGTCTCCCCGGTCACGGTGAAGCGGGACTGGCGCATCGCCAAGGCGGCGCTGCGGATTGAGCTCGGCGG
CGGTGTTCGGGGTGCCGGGGGTCGGCTGTGA

Upstream 100 bases:

>100_bases
TTAGAAATCACACCGGGAGCACGTGCACTCGGGGGCACTCTCGGAAAGTAAGCGTACCGGATCGCCCGCAGGTGTACAAT
TCCTGCAACGGGGATGTGGT

Downstream 100 bases:

>100_bases
CGCAGGGGCGGTGGCGGCAAATCACGGAAATTCTGCGGGCGGCATGGGAATTGGAGGGCAGGGAACGAGCCGCATATCTG
GACCGGGCGCTGACGGATGA

Product: ECF subfamily RNA polymerase sigma-24 factor

Products: NA

Alternate protein names: Sigma Factor ECF-Like Family Protein; RNA Polymerase Sigma-24 Subunit ECF Subfamily; RNA Polymerase Sigma Factor; ECF Sigma Factor Family Protein; Sigma Factor; RNA Polymerase ECF-Type Sigma Factor; DNA-Directed RNA Polymeracialized Sigma Subunit; RNA Polymerase Sigma-E Factor; Extracytoplasmic Sigma Factor ECF; RNA Polymerase ECF-Subfamily Sigma Factor; ECF Family RNA Polymerase Sigma Factor

Number of amino acids: Translated: 196; Mature: 195

Protein sequence:

>196_residues
MGQAEAGEVTRLLQSWSRGEKQALNELVPLVYRELRRLAAAYIRRERPDHTLQPTGLVHEAYLRLIEQTQVECLDRAKFF
IVAANLMRQILVDHARRRLAGKRGGGNQVVLDEAAGAFREDAVDLVELDQALQRLARLDARQGRVVELRFFLGLTEDEIA
DILDVSPVTVKRDWRIAKAALRIELGGGVRGAGGRL

Sequences:

>Translated_196_residues
MGQAEAGEVTRLLQSWSRGEKQALNELVPLVYRELRRLAAAYIRRERPDHTLQPTGLVHEAYLRLIEQTQVECLDRAKFF
IVAANLMRQILVDHARRRLAGKRGGGNQVVLDEAAGAFREDAVDLVELDQALQRLARLDARQGRVVELRFFLGLTEDEIA
DILDVSPVTVKRDWRIAKAALRIELGGGVRGAGGRL
>Mature_195_residues
GQAEAGEVTRLLQSWSRGEKQALNELVPLVYRELRRLAAAYIRRERPDHTLQPTGLVHEAYLRLIEQTQVECLDRAKFFI
VAANLMRQILVDHARRRLAGKRGGGNQVVLDEAAGAFREDAVDLVELDQALQRLARLDARQGRVVELRFFLGLTEDEIAD
ILDVSPVTVKRDWRIAKAALRIELGGGVRGAGGRL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21985; Mature: 21853

Theoretical pI: Translated: 9.65; Mature: 9.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGQAEAGEVTRLLQSWSRGEKQALNELVPLVYRELRRLAAAYIRRERPDHTLQPTGLVHE
CCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH
AYLRLIEQTQVECLDRAKFFIVAANLMRQILVDHARRRLAGKRGGGNQVVLDEAAGAFRE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHCHHHH
DAVDLVELDQALQRLARLDARQGRVVELRFFLGLTEDEIADILDVSPVTVKRDWRIAKAA
HHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHCCCHHHHHHHHCCCCCEECHHHHHHHHH
LRIELGGGVRGAGGRL
HEEEECCCCCCCCCCC
>Mature Secondary Structure 
GQAEAGEVTRLLQSWSRGEKQALNELVPLVYRELRRLAAAYIRRERPDHTLQPTGLVHE
CCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH
AYLRLIEQTQVECLDRAKFFIVAANLMRQILVDHARRRLAGKRGGGNQVVLDEAAGAFRE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHCHHHH
DAVDLVELDQALQRLARLDARQGRVVELRFFLGLTEDEIADILDVSPVTVKRDWRIAKAA
HHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHCCCHHHHHHHHCCCCCEECHHHHHHHHH
LRIELGGGVRGAGGRL
HEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA