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The map label for this gene is ssb [H]

Identifier: 116626683

GI number: 116626683

Start: 9613183

End: 9613572

Strand: Direct

Name: ssb [H]

Synonym: Acid_7654

Alternate gene names: 116626683

Gene position: 9613183-9613572 (Clockwise)

Preceding gene: 116626679

Following gene: 116626693

Centisome position: 96.46

GC content: 58.72

Gene sequence:

>390_bases
ATGTACCTCAACAGAATCACCCTTATCGGTTTTATCGGCAGCGATGCCGAAAGAAAGGCCGCCAACACAACCAAGATCGC
GATCTTCTCGCTCGCCACCAAGACGTCCTGGAAGAACGATGCCGGATCCTGGGAATCGCGGACCGAGTGGCATCGATGCG
TGGCCTTCGGGAAACTCGCCGATTTCGCCGGCACACTCTCCAAAGGCGCGCATGTGGCCGTCGAAGGTGAACTCCGCAGC
CATGAATACCAGCGCGAGCTCGCCGTGGGCACACAGAAAACCAACATCACTCAGCGAGTCTGGGAAGTCCGCGTCGACTC
TGTGCTCAAGCTCGATCGCGCCGCCAAGCGTGAAACCTCTGAGGAGAATCACGAGGAGGTGCCCCGCTAA

Upstream 100 bases:

>100_bases
CCCCCGTTCCGGTCCCCCCAGAAAAGCAGCTTCTTGCCTGGGGAGCCGCGCCCACTCGCTTTCCGGTGCCCGAGACCAAC
GGGCAGAACAGGAGAAACGT

Downstream 100 bases:

>100_bases
GGGGCATCTCCTTGTAGATTCCGCGGGCGAGCATCTACCGCGCTGTCTCCTGGTTGATTTCGATTGCGCAGCAGCACTCT
ATATGCTGCCTCTTCCCAGG

Product: single-strand binding protein

Products: NA

Alternate protein names: SSB; Helix-destabilizing protein [H]

Number of amino acids: Translated: 129; Mature: 129

Protein sequence:

>129_residues
MYLNRITLIGFIGSDAERKAANTTKIAIFSLATKTSWKNDAGSWESRTEWHRCVAFGKLADFAGTLSKGAHVAVEGELRS
HEYQRELAVGTQKTNITQRVWEVRVDSVLKLDRAAKRETSEENHEEVPR

Sequences:

>Translated_129_residues
MYLNRITLIGFIGSDAERKAANTTKIAIFSLATKTSWKNDAGSWESRTEWHRCVAFGKLADFAGTLSKGAHVAVEGELRS
HEYQRELAVGTQKTNITQRVWEVRVDSVLKLDRAAKRETSEENHEEVPR
>Mature_129_residues
MYLNRITLIGFIGSDAERKAANTTKIAIFSLATKTSWKNDAGSWESRTEWHRCVAFGKLADFAGTLSKGAHVAVEGELRS
HEYQRELAVGTQKTNITQRVWEVRVDSVLKLDRAAKRETSEENHEEVPR

Specific function: This protein is essential for replication of the chromosome. It is also involved in DNA recombination and repair [H]

COG id: COG0629

COG function: function code L; Single-stranded DNA-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SSB domain [H]

Homologues:

Organism=Escherichia coli, GI1790494, Length=84, Percent_Identity=42.8571428571429, Blast_Score=68, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR000424
- InterPro:   IPR011344 [H]

Pfam domain/function: PF00436 SSB [H]

EC number: NA

Molecular weight: Translated: 14575; Mature: 14575

Theoretical pI: Translated: 9.16; Mature: 9.16

Prosite motif: PS50935 SSB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYLNRITLIGFIGSDAERKAANTTKIAIFSLATKTSWKNDAGSWESRTEWHRCVAFGKLA
CCCCEEEEEEEECCCCHHHCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHH
DFAGTLSKGAHVAVEGELRSHEYQRELAVGTQKTNITQRVWEVRVDSVLKLDRAAKRETS
HHHHHHCCCCEEEEECCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
EENHEEVPR
CCCCCCCCC
>Mature Secondary Structure
MYLNRITLIGFIGSDAERKAANTTKIAIFSLATKTSWKNDAGSWESRTEWHRCVAFGKLA
CCCCEEEEEEEECCCCHHHCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHH
DFAGTLSKGAHVAVEGELRSHEYQRELAVGTQKTNITQRVWEVRVDSVLKLDRAAKRETS
HHHHHHCCCCEEEEECCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
EENHEEVPR
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12368813 [H]