| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116626666
Identifier: 116626666
GI number: 116626666
Start: 9584914
End: 9587178
Strand: Direct
Name: 116626666
Synonym: Acid_7635
Alternate gene names: NA
Gene position: 9584914-9587178 (Clockwise)
Preceding gene: 116626665
Following gene: 116626671
Centisome position: 96.18
GC content: 52.49
Gene sequence:
>2265_bases ATGTCGCGATTGACTGTATGTCTGTTTGCGCTACTTATGAGCTCCACGGCTTTGCTCGCTAATGGCAGTTGTCCACATAT TGGCGCTGATACTAGCTGTGGCATTCTCATTGTGATTACAGACCAAGGCATTTCTGTGCAACAGGACCCAACCCAAGGTC CATTCGACGGCGTCGAGGACACTTTAGTGGGCGTGCAAAACAACTCCTCGAAGAGGGTTATGTCTTTGCCTTTGACCGCT TCCCAGGCGATCTTCTCCTTCGACGGAGATGGGTTGTGTGCATTCGTCACCTGTACGTGGCCTCACCCGTATTCGTACGA AGGACCTATAACAAACTTTTCATCGATAAACGCCGCCGGGACCTCAGGCATAGTTAATTTCGTGGGCGGCCTTGCTGCGG GAGATTTCACGTACTTCAGCTTAGAACTCAGTATCTCTACGATATGTCAGCCGTTAACAGTCGCGCCGCTGCTTAAGCAG AACAGCGGTGCGTGGACTCTCGACACTTATGATCATTTATACGTAACCAAGACATTCGCCAATGCCGATGCCGTAGTCGT GACGAATAACCCTACCATTGAACTTGCGATCATCCCTAATTCGGTTGGACAACCAGCTAATCAGGGCGCAACCACCCAGG CGATTATGCTAACCACGAAGACACTAAATGGCATCCGGGACGCGATCAATAGTGTAGGAGTCACAGGTGTAACCGCGAGT GTGTTGAACAAGCAGGTAAATAATACTACCAGATACTACTTATCGTTGACGGTGAATATTGCCGGCACGAATACGTTACA GCTGAGGACCACCGCCGGTGCACCCACCAGCAATATTCTCAGAAACATCAGCGCTAAGGGATGTTATTTGACGTCGACAG CAATGCTGATCAACTATCGCGCGGGCAATCAACAAGTGACAGATCCCAGGGCACTAAACAACTGGTTGAACTCTCAGGTG GACGGGTACATCGGTGCAGGCAACCTAAATCCAGTAGCTGTTGCAAGATATGCTCGGAATGTTGTGAATGTGGGTATGTG GTTTCAGCCGAGCACTGGGAACCAGCGGGACGATTTTGCCCTGAACAACTATTTGTGTACCGGAAATCCTGCGGTACTCA GAGTCGCTGGATCGCCTGATCACTTCGTGGTTGCAACCGGTCAAACTGTGGTGAATGGCCAGAACAGCTATTTTATCAAC GATCCGTATTACGCCGCGGTAACCTTGGCTGATCCCCGGTATAACAATAGCTATAAAGACTTACGTCTGTTCAGCTCCAC TTCTACCCCTCCAAACGCTCTTGTCGTGTCCGCTCATTCGCCAGTGGAACTGCTATTGACGGATTCATCAGGTAATAGAA CGGGTTATGATCCCACGACTGGAGGTACAGTGCAGCAGATTCCAGGTAGCGGTTACAGTCGTGAGTCAATTGGGGATGAT GATGATCCAGTGAATGAGCCGCCAACTGATGAGACCAAGTCGCTCGAGGCCATTGGGGTAGCATCCGGTTTATATAAGTT TCAGGTCATCGGTGTTGGCACCGGCCCCTTTACCATCGATGTTCTCGCATATGATAGCTCAGGTACACCACAAATCCAGT CGTTTACCGGGACAGCGACGCAGGGCTCAGCTGACGTTTACAACATTACGTATTCGTCAACGCCGGGCGTACCGCTCGTG GTAGTTCCCGCTGATGACATTCTGCTGCCGCCCAATGTGACTGTAGGCCCGGGGCAGTGTGTACCATTGCCATTGAGCTT GACATCGCCTTCGGGGCCGATTGGCACGTTCATCACCCTCACGAGCAGCGATCCTTCAAAGGTCACGTTGGGACCGGGGA ACCTGAGTTCTGAAACAGTTTTCATTCCCGCTGGTGCGATTACCGGTGCAAGAACGCCTCTCGTATGTGGGGTCAACTTC GGGACGGCAACCATCTCCGCCACTGGTGGCGGTCTGCCGTCAGCTAACCAGACTGTACTGGTGAGCGCGACACTCAGCTT CTCACCGTCTAATAGTGCCATTACGAGAGGGAAGCAGGACCGGCTGACGTTGAGTCTCTCGGCGCCCGCACCAGTCGGTG GCGTGACCGTGAGTCTCAATTCCGACCAGCCAAGTGTCGCCACTGTCCCGTCCTCAGTGACGATCTTGGCTGGCACATCC AGCGTGATTGTTCCGATAACTGGTATTGCCGTGGGCTCGACAGTGATCCACGCCAGCTCGTTGCCGAACGTCCCCGAGAC AACTGCTAGTGTAACGGTCCAGTAA
Upstream 100 bases:
>100_bases GCCATTGGAAGCGGCAAATCGATGGAAGAGATTGGCAAACTTTATGATCGCCACTTTTCGGGTTGAGTGAGTATCGATAC AGGAGTTGGGAGATTACGTT
Downstream 100 bases:
>100_bases TGGACTAATAGGCGGTGCTGCGTGTTTCTCTTTAGGTTGCGCAGTGGCGGTCCATTCACGACTCCGCGTCGCATTGCTCC TCGTCGAACGCCTGACTCCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 754; Mature: 753
Protein sequence:
>754_residues MSRLTVCLFALLMSSTALLANGSCPHIGADTSCGILIVITDQGISVQQDPTQGPFDGVEDTLVGVQNNSSKRVMSLPLTA SQAIFSFDGDGLCAFVTCTWPHPYSYEGPITNFSSINAAGTSGIVNFVGGLAAGDFTYFSLELSISTICQPLTVAPLLKQ NSGAWTLDTYDHLYVTKTFANADAVVVTNNPTIELAIIPNSVGQPANQGATTQAIMLTTKTLNGIRDAINSVGVTGVTAS VLNKQVNNTTRYYLSLTVNIAGTNTLQLRTTAGAPTSNILRNISAKGCYLTSTAMLINYRAGNQQVTDPRALNNWLNSQV DGYIGAGNLNPVAVARYARNVVNVGMWFQPSTGNQRDDFALNNYLCTGNPAVLRVAGSPDHFVVATGQTVVNGQNSYFIN DPYYAAVTLADPRYNNSYKDLRLFSSTSTPPNALVVSAHSPVELLLTDSSGNRTGYDPTTGGTVQQIPGSGYSRESIGDD DDPVNEPPTDETKSLEAIGVASGLYKFQVIGVGTGPFTIDVLAYDSSGTPQIQSFTGTATQGSADVYNITYSSTPGVPLV VVPADDILLPPNVTVGPGQCVPLPLSLTSPSGPIGTFITLTSSDPSKVTLGPGNLSSETVFIPAGAITGARTPLVCGVNF GTATISATGGGLPSANQTVLVSATLSFSPSNSAITRGKQDRLTLSLSAPAPVGGVTVSLNSDQPSVATVPSSVTILAGTS SVIVPITGIAVGSTVIHASSLPNVPETTASVTVQ
Sequences:
>Translated_754_residues MSRLTVCLFALLMSSTALLANGSCPHIGADTSCGILIVITDQGISVQQDPTQGPFDGVEDTLVGVQNNSSKRVMSLPLTA SQAIFSFDGDGLCAFVTCTWPHPYSYEGPITNFSSINAAGTSGIVNFVGGLAAGDFTYFSLELSISTICQPLTVAPLLKQ NSGAWTLDTYDHLYVTKTFANADAVVVTNNPTIELAIIPNSVGQPANQGATTQAIMLTTKTLNGIRDAINSVGVTGVTAS VLNKQVNNTTRYYLSLTVNIAGTNTLQLRTTAGAPTSNILRNISAKGCYLTSTAMLINYRAGNQQVTDPRALNNWLNSQV DGYIGAGNLNPVAVARYARNVVNVGMWFQPSTGNQRDDFALNNYLCTGNPAVLRVAGSPDHFVVATGQTVVNGQNSYFIN DPYYAAVTLADPRYNNSYKDLRLFSSTSTPPNALVVSAHSPVELLLTDSSGNRTGYDPTTGGTVQQIPGSGYSRESIGDD DDPVNEPPTDETKSLEAIGVASGLYKFQVIGVGTGPFTIDVLAYDSSGTPQIQSFTGTATQGSADVYNITYSSTPGVPLV VVPADDILLPPNVTVGPGQCVPLPLSLTSPSGPIGTFITLTSSDPSKVTLGPGNLSSETVFIPAGAITGARTPLVCGVNF GTATISATGGGLPSANQTVLVSATLSFSPSNSAITRGKQDRLTLSLSAPAPVGGVTVSLNSDQPSVATVPSSVTILAGTS SVIVPITGIAVGSTVIHASSLPNVPETTASVTVQ >Mature_753_residues SRLTVCLFALLMSSTALLANGSCPHIGADTSCGILIVITDQGISVQQDPTQGPFDGVEDTLVGVQNNSSKRVMSLPLTAS QAIFSFDGDGLCAFVTCTWPHPYSYEGPITNFSSINAAGTSGIVNFVGGLAAGDFTYFSLELSISTICQPLTVAPLLKQN SGAWTLDTYDHLYVTKTFANADAVVVTNNPTIELAIIPNSVGQPANQGATTQAIMLTTKTLNGIRDAINSVGVTGVTASV LNKQVNNTTRYYLSLTVNIAGTNTLQLRTTAGAPTSNILRNISAKGCYLTSTAMLINYRAGNQQVTDPRALNNWLNSQVD GYIGAGNLNPVAVARYARNVVNVGMWFQPSTGNQRDDFALNNYLCTGNPAVLRVAGSPDHFVVATGQTVVNGQNSYFIND PYYAAVTLADPRYNNSYKDLRLFSSTSTPPNALVVSAHSPVELLLTDSSGNRTGYDPTTGGTVQQIPGSGYSRESIGDDD DPVNEPPTDETKSLEAIGVASGLYKFQVIGVGTGPFTIDVLAYDSSGTPQIQSFTGTATQGSADVYNITYSSTPGVPLVV VPADDILLPPNVTVGPGQCVPLPLSLTSPSGPIGTFITLTSSDPSKVTLGPGNLSSETVFIPAGAITGARTPLVCGVNFG TATISATGGGLPSANQTVLVSATLSFSPSNSAITRGKQDRLTLSLSAPAPVGGVTVSLNSDQPSVATVPSSVTILAGTSS VIVPITGIAVGSTVIHASSLPNVPETTASVTVQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 78005; Mature: 77874
Theoretical pI: Translated: 4.51; Mature: 4.51
Prosite motif: PS00615 C_TYPE_LECTIN_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRLTVCLFALLMSSTALLANGSCPHIGADTSCGILIVITDQGISVQQDPTQGPFDGVED CCHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCEEEEEECCCCEECCCCCCCCCCCCCC TLVGVQNNSSKRVMSLPLTASQAIFSFDGDGLCAFVTCTWPHPYSYEGPITNFSSINAAG EEEEEECCCCCEEEEECCCCCCEEEEECCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCC TSGIVNFVGGLAAGDFTYFSLELSISTICQPLTVAPLLKQNSGAWTLDTYDHLYVTKTFA CCHHHHHHCCCCCCCEEEEEEEEEHHHHCCCCEECHHHCCCCCCEEEECCCEEEEEEEEC NADAVVVTNNPTIELAIIPNSVGQPANQGATTQAIMLTTKTLNGIRDAINSVGVTGVTAS CCCEEEEECCCEEEEEECCCCCCCCCCCCCCEEEEEEEEHHHHHHHHHHHHCCCCCEEHH VLNKQVNNTTRYYLSLTVNIAGTNTLQLRTTAGAPTSNILRNISAKGCYLTSTAMLINYR HHHHHCCCCEEEEEEEEEEECCCCEEEEEEECCCCHHHHHHCCCCCCEEEEEEEEEEEEE AGNQQVTDPRALNNWLNSQVDGYIGAGNLNPVAVARYARNVVNVGMWFQPSTGNQRDDFA CCCCCCCCHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHEEECEEEECCCCCCCCCEE LNNYLCTGNPAVLRVAGSPDHFVVATGQTVVNGQNSYFINDPYYAAVTLADPRYNNSYKD ECCEEECCCCEEEEEECCCCEEEEECCCEEEECCCCEEECCCEEEEEEEECCCCCCCCCE LRLFSSTSTPPNALVVSAHSPVELLLTDSSGNRTGYDPTTGGTVQQIPGSGYSRESIGDD EEEEECCCCCCCEEEEECCCCEEEEEECCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCC DDPVNEPPTDETKSLEAIGVASGLYKFQVIGVGTGPFTIDVLAYDSSGTPQIQSFTGTAT CCCCCCCCCCHHCCEEEEEEECCCEEEEEEEECCCCEEEEEEEECCCCCCCEEEEECCCC QGSADVYNITYSSTPGVPLVVVPADDILLPPNVTVGPGQCVPLPLSLTSPSGPIGTFITL CCCCEEEEEEECCCCCCEEEEECCCCEEECCCCEECCCCEEEEEEEECCCCCCCEEEEEE TSSDPSKVTLGPGNLSSETVFIPAGAITGARTPLVCGVNFGTATISATGGGLPSANQTVL ECCCCCEEEECCCCCCCCEEEEECCCCCCCCCCEEEEECCCCEEEEECCCCCCCCCCEEE VSATLSFSPSNSAITRGKQDRLTLSLSAPAPVGGVTVSLNSDQPSVATVPSSVTILAGTS EEEEEEECCCCCHHCCCCCCEEEEEECCCCCCCCEEEEECCCCCCEEECCCCEEEEECCC SVIVPITGIAVGSTVIHASSLPNVPETTASVTVQ EEEEEEEEEEECCEEEEECCCCCCCCCCEEEEEC >Mature Secondary Structure SRLTVCLFALLMSSTALLANGSCPHIGADTSCGILIVITDQGISVQQDPTQGPFDGVED CHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCEEEEEECCCCEECCCCCCCCCCCCCC TLVGVQNNSSKRVMSLPLTASQAIFSFDGDGLCAFVTCTWPHPYSYEGPITNFSSINAAG EEEEEECCCCCEEEEECCCCCCEEEEECCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCC TSGIVNFVGGLAAGDFTYFSLELSISTICQPLTVAPLLKQNSGAWTLDTYDHLYVTKTFA CCHHHHHHCCCCCCCEEEEEEEEEHHHHCCCCEECHHHCCCCCCEEEECCCEEEEEEEEC NADAVVVTNNPTIELAIIPNSVGQPANQGATTQAIMLTTKTLNGIRDAINSVGVTGVTAS CCCEEEEECCCEEEEEECCCCCCCCCCCCCCEEEEEEEEHHHHHHHHHHHHCCCCCEEHH VLNKQVNNTTRYYLSLTVNIAGTNTLQLRTTAGAPTSNILRNISAKGCYLTSTAMLINYR HHHHHCCCCEEEEEEEEEEECCCCEEEEEEECCCCHHHHHHCCCCCCEEEEEEEEEEEEE AGNQQVTDPRALNNWLNSQVDGYIGAGNLNPVAVARYARNVVNVGMWFQPSTGNQRDDFA CCCCCCCCHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHEEECEEEECCCCCCCCCEE LNNYLCTGNPAVLRVAGSPDHFVVATGQTVVNGQNSYFINDPYYAAVTLADPRYNNSYKD ECCEEECCCCEEEEEECCCCEEEEECCCEEEECCCCEEECCCEEEEEEEECCCCCCCCCE LRLFSSTSTPPNALVVSAHSPVELLLTDSSGNRTGYDPTTGGTVQQIPGSGYSRESIGDD EEEEECCCCCCCEEEEECCCCEEEEEECCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCC DDPVNEPPTDETKSLEAIGVASGLYKFQVIGVGTGPFTIDVLAYDSSGTPQIQSFTGTAT CCCCCCCCCCHHCCEEEEEEECCCEEEEEEEECCCCEEEEEEEECCCCCCCEEEEECCCC QGSADVYNITYSSTPGVPLVVVPADDILLPPNVTVGPGQCVPLPLSLTSPSGPIGTFITL CCCCEEEEEEECCCCCCEEEEECCCCEEECCCCEECCCCEEEEEEEECCCCCCCEEEEEE TSSDPSKVTLGPGNLSSETVFIPAGAITGARTPLVCGVNFGTATISATGGGLPSANQTVL ECCCCCEEEECCCCCCCCEEEEECCCCCCCCCCEEEEECCCCEEEEECCCCCCCCCCEEE VSATLSFSPSNSAITRGKQDRLTLSLSAPAPVGGVTVSLNSDQPSVATVPSSVTILAGTS EEEEEEECCCCCHHCCCCCCEEEEEECCCCCCCCEEEEECCCCCCEEECCCCEEEEECCC SVIVPITGIAVGSTVIHASSLPNVPETTASVTVQ EEEEEEEEEEECCEEEEECCCCCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA