| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116626665
Identifier: 116626665
GI number: 116626665
Start: 9584221
End: 9584883
Strand: Direct
Name: 116626665
Synonym: Acid_7634
Alternate gene names: NA
Gene position: 9584221-9584883 (Clockwise)
Preceding gene: 116626664
Following gene: 116626666
Centisome position: 96.17
GC content: 53.39
Gene sequence:
>663_bases ATGCCCCAGCTAATGCAGATCGCTGGTGTTATACTTATGCTCGTAGCACACGGGCATCGGGCTCCCAAGGCGTTCGCGGC GAACTCGCTGGCTCCATCGGCATTGGCTGCCGCACAATTGCTGAAGTCGTTCAGCCAACGTCAAGAACAGTCCAATAAGA CAGGCACATCCACCAACCAAGAGCACACTCGCGACTCATGGTCAAAGTACGCCAGCAAGAACTGTCAATTCAGAATTCAG CATCTAGCAGCCGCTCTAGTCACAGAACGCTCTCCTTGCAACATCGACATCGAGACTCCCCTTTCGTTGCCTGGTGTTCG CTCGGGAGGTCCAGAAGCCTTTATCCTCAGAATCCTCGTGAGTCCTAATCCAATGCGGGTATCCGCCAAGGAGTGGGCGA GGGCTCAGTACGCGAAAATTGCATCGTCGACGCCAGAGTCAATTCTAAGTGAGCGGCCCCTGACCTTCGGTGGCGGCGAT GGGTATACGGTTGCGATTGCGAGTGGAGACCAAAACTACATCTATCTTTATGCCACAAGAGAGAAGCGCGCCTACGAACT AATGTATATCGATCCAACGTCGGCTCCGGGTGTGCCATTGGAAGCGGCAAATCGATGGAAGAGATTGGCAAACTTTATGA TCGCCACTTTTCGGGTTGAGTGA
Upstream 100 bases:
>100_bases CCTTAAGATCGACTTGCGCAAGCACACTACGGCCCCCGGCTTCTAAATTTCATTTTTCTTCGTTGCATCTAAGAGAACTC GTGTATAATACAACCCAATC
Downstream 100 bases:
>100_bases GTATCGATACAGGAGTTGGGAGATTACGTTATGTCGCGATTGACTGTATGTCTGTTTGCGCTACTTATGAGCTCCACGGC TTTGCTCGCTAATGGCAGTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 220; Mature: 219
Protein sequence:
>220_residues MPQLMQIAGVILMLVAHGHRAPKAFAANSLAPSALAAAQLLKSFSQRQEQSNKTGTSTNQEHTRDSWSKYASKNCQFRIQ HLAAALVTERSPCNIDIETPLSLPGVRSGGPEAFILRILVSPNPMRVSAKEWARAQYAKIASSTPESILSERPLTFGGGD GYTVAIASGDQNYIYLYATREKRAYELMYIDPTSAPGVPLEAANRWKRLANFMIATFRVE
Sequences:
>Translated_220_residues MPQLMQIAGVILMLVAHGHRAPKAFAANSLAPSALAAAQLLKSFSQRQEQSNKTGTSTNQEHTRDSWSKYASKNCQFRIQ HLAAALVTERSPCNIDIETPLSLPGVRSGGPEAFILRILVSPNPMRVSAKEWARAQYAKIASSTPESILSERPLTFGGGD GYTVAIASGDQNYIYLYATREKRAYELMYIDPTSAPGVPLEAANRWKRLANFMIATFRVE >Mature_219_residues PQLMQIAGVILMLVAHGHRAPKAFAANSLAPSALAAAQLLKSFSQRQEQSNKTGTSTNQEHTRDSWSKYASKNCQFRIQH LAAALVTERSPCNIDIETPLSLPGVRSGGPEAFILRILVSPNPMRVSAKEWARAQYAKIASSTPESILSERPLTFGGGDG YTVAIASGDQNYIYLYATREKRAYELMYIDPTSAPGVPLEAANRWKRLANFMIATFRVE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24157; Mature: 24026
Theoretical pI: Translated: 9.90; Mature: 9.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPQLMQIAGVILMLVAHGHRAPKAFAANSLAPSALAAAQLLKSFSQRQEQSNKTGTSTNQ CCHHHHHHHHHHHHHHCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCH EHTRDSWSKYASKNCQFRIQHLAAALVTERSPCNIDIETPLSLPGVRSGGPEAFILRILV HHHHHHHHHHHCCCCEEHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCEEEEEEEE SPNPMRVSAKEWARAQYAKIASSTPESILSERPLTFGGGDGYTVAIASGDQNYIYLYATR CCCCCEECHHHHHHHHHHHHHCCCHHHHHHCCCCEEECCCCEEEEEECCCCCEEEEEEEC EKRAYELMYIDPTSAPGVPLEAANRWKRLANFMIATFRVE CCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHEEEEEC >Mature Secondary Structure PQLMQIAGVILMLVAHGHRAPKAFAANSLAPSALAAAQLLKSFSQRQEQSNKTGTSTNQ CHHHHHHHHHHHHHHCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCH EHTRDSWSKYASKNCQFRIQHLAAALVTERSPCNIDIETPLSLPGVRSGGPEAFILRILV HHHHHHHHHHHCCCCEEHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCEEEEEEEE SPNPMRVSAKEWARAQYAKIASSTPESILSERPLTFGGGDGYTVAIASGDQNYIYLYATR CCCCCEECHHHHHHHHHHHHHCCCHHHHHHCCCCEEECCCCEEEEEECCCCCEEEEEEEC EKRAYELMYIDPTSAPGVPLEAANRWKRLANFMIATFRVE CCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA