| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116626627
Identifier: 116626627
GI number: 116626627
Start: 9516805
End: 9518457
Strand: Direct
Name: 116626627
Synonym: Acid_7590
Alternate gene names: NA
Gene position: 9516805-9518457 (Clockwise)
Preceding gene: 116626626
Following gene: 116626628
Centisome position: 95.5
GC content: 61.16
Gene sequence:
>1653_bases ATGAGGGCGATTCTCATGGGCGTTCTGCTGCTCGGGTTAGCCGGCGCGGCACCGGCCCAGATACAATTCGAGGAAATCGC GAAGAAGGCAGGGCTCGGTTTCCGACTCCATAACTCCGCGGCCGGCAAGTTTCATCAAATCGAGCTGATGCCCGGCGGGG TCGCGGCCCTGGACTTCGACAACGACGGCTGCACCGATCTTTACTTTACGAACGGCGCATCGATTCCGTCACTCCGGAAG ATTGGTCCCGAGTTCTACAACCGCCTCTATCGGAACCGCTGCGACGGTACGTTCGAAGACGTGACCTTAAAGGCGGGCGT CGGCGGTGAGGGCTACTCGATGGCGGTGGCCGCGGCGGACTTCGATAACGACGGCCGCGTCGATATCTTCATCGCCGGTG TCAACCGCAACATTCTCTACCGCAATCTCGGCGGCGGCCGCTTCGCTGATATAACGGCACGGGCCGGACTGTCCGGCATC GACCCTCAACACGGGAAAATGTGGTCGATCTCGGCGGGCTGGTTCGATTTCGATAACGATGGATGGCTGGATCTATTCGT GAGCAACTACGTGGCCTGGGATCCCTCGACCGAGCCGCGCTGCGGCACCGCGGACGCTCGCTTTTACTGCCATCCGAGTG CCTACGCGAGCGTCCCGAATCAGCTCTTCCACAATAATCACGATGGCACGTTCACGGATGTTTCGCGGCAATCCGGAATC GCGGCCCATCCCGGCAAAGGGATGGGTGTCGCATTCGCGGATTTTGACGGCGACGGCTTCGAAGATGTCTTCGTCGCCAA CGATTCCGTGCGCAGCTTTCTGTTTCGCAATCGGGGAAACGGGACGTTCCAGGAGGTCGGCGTGGAGGCGGGCGTGGCAC TCCGCGAGGACGGCAAGGCGATCGCGGGCATGGGCGTGGTTTTCAACGATTTCGATAACGATGGCCGGCCGGACCTTGTT GTCTCCGGGATGGCCAACGACGGTTTTCTGCTTTTCCGCAATCTCGGGAAACGAGGGCTGTTTGAAGATTTCGCGCAGCG ATCGGGTCTTCTGCTCCCCACCCGGCCGTTGACTGGCTGGAGTTTGGGATTCTACGACTTTGACAATGACGGCTGGCGCG ATCTGTTTTGCACCGTATCGCACTTTCCCTCATTCGAGGCCTACATCGGAAAGTCGGCTGCCCAGCCGAATCGCCTTTTC CGCAACGTGGGGGGCAGCCGCTTCGAGGATGTGTCCTCCGGCGCGGGCTCCGATTTTCAACTCCCGGCACTTCATCACGG TAGCGCGTTTGCGGACTTCGACAACGATGGACGCGTTGATGTCGTGGTAACGACGCTCGATGGAGGACCCAAGCTCTTCC GCAACATCACCGCCGGAGCGAATCACTGGCTTGCCGTGAGACTCCATGGGACGCGGAGCAATCGCCAGGGACTCGGCACG GTGGTCGAAATCACGCTGCCTGATGGGCGGCGTATCACCGGACACGCCACAACATCGGTCGGGTACGCGTCCTCAAGCGA GCCGCTGGTAAGATTCGGACTGGGAGCGGCCGCCGCGGTGGACCGCCTCGTAGTGCATTGGCCGGGTGGCCGCGCACAGG AAGTTGCGGGTGTGCAGGTGGACAAGGTGGTGGCGATCGAGGAGCGAGAATGA
Upstream 100 bases:
>100_bases TGCTGCCGCGGGCCGATGCACGCTCCGTGGTGGAGCGGTACCTCGGTTTCAATCCAGGTTCCAAAGCGGCCCGCGAGCGG CTGGAGGAATTGGCGCGGCC
Downstream 100 bases:
>100_bases CGTTGGGCTCCGCCTGTGCGATCGCGCTTGCGTTCGCACTCGTTGCGGCCGCTCAGCCCCCGGCGGGTCTGGCCGCCTAT GCGCGTGCTGACCGGATGTT
Product: ASPIC/UnbV domain-containing protein
Products: NA
Alternate protein names: FG-GAP Repeat Domain Protein; ASPIC/UnbV Domain Protein; FG-GAP Repeat-Containing Protein; ASPIC/UnbV; FG-GAP Repeat Protein; TPR Repeat-Containing Protein; PpiC-Type Peptidyl-Prolyl Cis-Trans Isomerase; Aspic/Unbv; Rhs Family Protein; Aspic/Unbv Domain Protein; FG-GAP Repeat- ASPIC/UnbV Domain-Containing Protein; Integrin-Like Protein; Protein Containing FG-GAP Repeats; Secreted Protein Containing FG-GAP Repeats; Fg-Gap Repeat Protein; ASPIC And UnbV Domain Protein; FG-GAP Repeat Domain-Containing Protein; RTX Family Protein Exoprotein; Protein Tyrosine Kinase Family; FG-GAP Repeat Protein/ASPIC/UnbV Domain Protein; Acid Secreted Protein ASPIC
Number of amino acids: Translated: 550; Mature: 550
Protein sequence:
>550_residues MRAILMGVLLLGLAGAAPAQIQFEEIAKKAGLGFRLHNSAAGKFHQIELMPGGVAALDFDNDGCTDLYFTNGASIPSLRK IGPEFYNRLYRNRCDGTFEDVTLKAGVGGEGYSMAVAAADFDNDGRVDIFIAGVNRNILYRNLGGGRFADITARAGLSGI DPQHGKMWSISAGWFDFDNDGWLDLFVSNYVAWDPSTEPRCGTADARFYCHPSAYASVPNQLFHNNHDGTFTDVSRQSGI AAHPGKGMGVAFADFDGDGFEDVFVANDSVRSFLFRNRGNGTFQEVGVEAGVALREDGKAIAGMGVVFNDFDNDGRPDLV VSGMANDGFLLFRNLGKRGLFEDFAQRSGLLLPTRPLTGWSLGFYDFDNDGWRDLFCTVSHFPSFEAYIGKSAAQPNRLF RNVGGSRFEDVSSGAGSDFQLPALHHGSAFADFDNDGRVDVVVTTLDGGPKLFRNITAGANHWLAVRLHGTRSNRQGLGT VVEITLPDGRRITGHATTSVGYASSSEPLVRFGLGAAAAVDRLVVHWPGGRAQEVAGVQVDKVVAIEERE
Sequences:
>Translated_550_residues MRAILMGVLLLGLAGAAPAQIQFEEIAKKAGLGFRLHNSAAGKFHQIELMPGGVAALDFDNDGCTDLYFTNGASIPSLRK IGPEFYNRLYRNRCDGTFEDVTLKAGVGGEGYSMAVAAADFDNDGRVDIFIAGVNRNILYRNLGGGRFADITARAGLSGI DPQHGKMWSISAGWFDFDNDGWLDLFVSNYVAWDPSTEPRCGTADARFYCHPSAYASVPNQLFHNNHDGTFTDVSRQSGI AAHPGKGMGVAFADFDGDGFEDVFVANDSVRSFLFRNRGNGTFQEVGVEAGVALREDGKAIAGMGVVFNDFDNDGRPDLV VSGMANDGFLLFRNLGKRGLFEDFAQRSGLLLPTRPLTGWSLGFYDFDNDGWRDLFCTVSHFPSFEAYIGKSAAQPNRLF RNVGGSRFEDVSSGAGSDFQLPALHHGSAFADFDNDGRVDVVVTTLDGGPKLFRNITAGANHWLAVRLHGTRSNRQGLGT VVEITLPDGRRITGHATTSVGYASSSEPLVRFGLGAAAAVDRLVVHWPGGRAQEVAGVQVDKVVAIEERE >Mature_550_residues MRAILMGVLLLGLAGAAPAQIQFEEIAKKAGLGFRLHNSAAGKFHQIELMPGGVAALDFDNDGCTDLYFTNGASIPSLRK IGPEFYNRLYRNRCDGTFEDVTLKAGVGGEGYSMAVAAADFDNDGRVDIFIAGVNRNILYRNLGGGRFADITARAGLSGI DPQHGKMWSISAGWFDFDNDGWLDLFVSNYVAWDPSTEPRCGTADARFYCHPSAYASVPNQLFHNNHDGTFTDVSRQSGI AAHPGKGMGVAFADFDGDGFEDVFVANDSVRSFLFRNRGNGTFQEVGVEAGVALREDGKAIAGMGVVFNDFDNDGRPDLV VSGMANDGFLLFRNLGKRGLFEDFAQRSGLLLPTRPLTGWSLGFYDFDNDGWRDLFCTVSHFPSFEAYIGKSAAQPNRLF RNVGGSRFEDVSSGAGSDFQLPALHHGSAFADFDNDGRVDVVVTTLDGGPKLFRNITAGANHWLAVRLHGTRSNRQGLGT VVEITLPDGRRITGHATTSVGYASSSEPLVRFGLGAAAAVDRLVVHWPGGRAQEVAGVQVDKVVAIEERE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI47777317, Length=472, Percent_Identity=26.9067796610169, Blast_Score=89, Evalue=9e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 59294; Mature: 59294
Theoretical pI: Translated: 5.32; Mature: 5.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRAILMGVLLLGLAGAAPAQIQFEEIAKKAGLGFRLHNSAAGKFHQIELMPGGVAALDFD CHHHHHHHHHHHHCCCCCCEEEHHHHHHHCCCCEEEECCCCCCEEEEEECCCCEEEEEEC NDGCTDLYFTNGASIPSLRKIGPEFYNRLYRNRCDGTFEDVTLKAGVGGEGYSMAVAAAD CCCCEEEEEECCCCCCHHHHCCHHHHHHHHHHCCCCCHHCEEEEECCCCCCCEEEEEEEC FDNDGRVDIFIAGVNRNILYRNLGGGRFADITARAGLSGIDPQHGKMWSISAGWFDFDND CCCCCCEEEEEEECCCCEEEEECCCCEEEEEEHHCCCCCCCCCCCEEEEEECCEEECCCC GWLDLFVSNYVAWDPSTEPRCGTADARFYCHPSAYASVPNQLFHNNHDGTFTDVSRQSGI CEEEEEEECEEEECCCCCCCCCCCCCEEEECCHHHHHCCHHHHHCCCCCCEEECHHCCCC AAHPGKGMGVAFADFDGDGFEDVFVANDSVRSFLFRNRGNGTFQEVGVEAGVALREDGKA EECCCCCCEEEEEECCCCCCCEEEEECHHHHHHHHHCCCCCCHHHHCHHCCEEEECCCCE IAGMGVVFNDFDNDGRPDLVVSGMANDGFLLFRNLGKRGLFEDFAQRSGLLLPTRPLTGW EEECEEEEECCCCCCCCCEEEEECCCCCEEEEECCCCCCHHHHHHHHCCCEEECCCCCCC SLGFYDFDNDGWRDLFCTVSHFPSFEAYIGKSAAQPNRLFRNVGGSRFEDVSSGAGSDFQ EEEEEECCCCCCEEEEEEECCCCCHHHHHCCCCCCHHHHHHHCCCCCHHHHHCCCCCCEE LPALHHGSAFADFDNDGRVDVVVTTLDGGPKLFRNITAGANHWLAVRLHGTRSNRQGLGT CCEEECCCEEECCCCCCEEEEEEEEECCCHHHHHHHCCCCCEEEEEEEECCCCCCCCCCE VVEITLPDGRRITGHATTSVGYASSSEPLVRFGLGAAAAVDRLVVHWPGGRAQEVAGVQV EEEEECCCCCEEECEEEEEECCCCCCCCEEEECCCHHHHHCEEEEECCCCCCCCCCCEEE DKVVAIEERE EEEEEEECCC >Mature Secondary Structure MRAILMGVLLLGLAGAAPAQIQFEEIAKKAGLGFRLHNSAAGKFHQIELMPGGVAALDFD CHHHHHHHHHHHHCCCCCCEEEHHHHHHHCCCCEEEECCCCCCEEEEEECCCCEEEEEEC NDGCTDLYFTNGASIPSLRKIGPEFYNRLYRNRCDGTFEDVTLKAGVGGEGYSMAVAAAD CCCCEEEEEECCCCCCHHHHCCHHHHHHHHHHCCCCCHHCEEEEECCCCCCCEEEEEEEC FDNDGRVDIFIAGVNRNILYRNLGGGRFADITARAGLSGIDPQHGKMWSISAGWFDFDND CCCCCCEEEEEEECCCCEEEEECCCCEEEEEEHHCCCCCCCCCCCEEEEEECCEEECCCC GWLDLFVSNYVAWDPSTEPRCGTADARFYCHPSAYASVPNQLFHNNHDGTFTDVSRQSGI CEEEEEEECEEEECCCCCCCCCCCCCEEEECCHHHHHCCHHHHHCCCCCCEEECHHCCCC AAHPGKGMGVAFADFDGDGFEDVFVANDSVRSFLFRNRGNGTFQEVGVEAGVALREDGKA EECCCCCCEEEEEECCCCCCCEEEEECHHHHHHHHHCCCCCCHHHHCHHCCEEEECCCCE IAGMGVVFNDFDNDGRPDLVVSGMANDGFLLFRNLGKRGLFEDFAQRSGLLLPTRPLTGW EEECEEEEECCCCCCCCCEEEEECCCCCEEEEECCCCCCHHHHHHHHCCCEEECCCCCCC SLGFYDFDNDGWRDLFCTVSHFPSFEAYIGKSAAQPNRLFRNVGGSRFEDVSSGAGSDFQ EEEEEECCCCCCEEEEEEECCCCCHHHHHCCCCCCHHHHHHHCCCCCHHHHHCCCCCCEE LPALHHGSAFADFDNDGRVDVVVTTLDGGPKLFRNITAGANHWLAVRLHGTRSNRQGLGT CCEEECCCEEECCCCCCEEEEEEEEECCCHHHHHHHCCCCCEEEEEEEECCCCCCCCCCE VVEITLPDGRRITGHATTSVGYASSSEPLVRFGLGAAAAVDRLVVHWPGGRAQEVAGVQV EEEEECCCCCEEECEEEEEECCCCCCCCEEEECCCHHHHHCEEEEECCCCCCCCCCCEEE DKVVAIEERE EEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA