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The map label for this gene is 116626615

Identifier: 116626615

GI number: 116626615

Start: 9502744

End: 9504297

Strand: Direct

Name: 116626615

Synonym: Acid_7578

Alternate gene names: NA

Gene position: 9502744-9504297 (Clockwise)

Preceding gene: 116626614

Following gene: 116626616

Centisome position: 95.36

GC content: 58.62

Gene sequence:

>1554_bases
ATGTCCGTCGATTACGACGTCATCATTATTGGGAGCGGCGCCGGAGGCGGTACCCTGGCCCGCCAACTGGCCCCGACCGG
AAAGCGGATCCTGATTCTCGAGCGCGGCGACTGGCTGAAACGCGAGGCGCTGAACTGGGATGCCAAGGCCGTTTTCGTGG
ACAACCGCTATATCTCTCCGGATACCTGGTACGACTCCCGCGGGCGGGCGTTCCAGCCACAGGTCCATTATTTCGTCGGC
GGCGCCACGAAGATGTACGGCGCCGCTTTGTACCGATTGCGCCGCGAGGATTTCGGGGAGCTTCGCGAATACGACGGCAT
CTCGCCGGCCTGGCCCATCAGCTACGACGAAATGGAACCCTTTTACACGAAGGCCGAGCAGATCTACCAGGTACACGGGA
TGCACGGCGTGGACCCAACCGAACCCTACGCGAGCGCACCATATCCTTTTCCGCCCGTGTCTCACGAGCCGCGCATTCAA
CAGCTGCTCGACAATTTGAAAGCCGCCGGCTATCACCCGTTTTCAGCCCCATGCGGAGTCATGCTCAAGGAACAGGACAT
GGCGGACAGCAAGTGTATCCGCTGCCAAACCTGCGATGGGTTTCCCTGCCTGGTTCACGCCAAGTCAGACGCCGAAGTGC
TCGCCGTGCGTCCTGCCCTGCAGTTTCCGAACGTAACGCTGCTGCGGAATTCGAAAGTCCTCAAGCTAACAACCGATGCC
GGCGGCGGTTCCGTTAAGGAAGTGATGGTCGAACGGAATGGAGAACTGGAGACATTTCGCGGGGATATCGTCGTCGTGTC
CTGCGGCGCGGCCAACTCCGCGAAGCTGCTGCTGATGTCCGCCAGCGAGAAGCATCCCCATGGACTTGCCAACGGGTCAG
ACCAGGTCGGGCGCAATTACATGTTCCACAACAGTATGGCCGTCCTGGCGATTTCCAGGGAGCCGAACCTCACCTTTTTC
CAGAAGACCATCGCGCTAAACGATTTTTACTTTGGGATGGAGGGGTTCGATTTTCCAATGGGGAATATCCAGATGGTCGG
CAAATCGGTGGGAGAGATGTATCGCGGCGAGAAGCCGCTGGAAACGGAGCTCGCCCCGCTGGGGTTGCTGAACGACCTCG
CCCGGCACGCGGTAGACTTCTGGCTCTCCACCGAAGATCTGCCGAATCCGGACAATCGTGTCAGCTTGGATAAACAGGGA
AATATCGTTCTCGCCTACACGCCGAGCAATCAGGTGCCTAAGCAGAAGCTTTACGATAAGTTGAAATCCATGCTGCAGCA
CCTGGGCATGCATCCGGACCATTTGATTCCCCGCAACGCCTACCTTAAGACAGAGATCCCGATTGCGGGAGTTGCTCATC
AGGCAGGCACCTGCCGCTTCGGTACCGATCCGGCAAGCTCGGTCCTCGATGTCAACTGCAAAGCTCATGAACTCGACAAT
CTGTATGTGGTTGACACGAGCTTCTTCGTCAGCATCGGTGCGGTGAACCCGGCGCTTACCGCCATGGCGAACGCCATCCG
GGTGGGGGAACATATCGCGGAGCGATTGGGATAG

Upstream 100 bases:

>100_bases
TGTGGTGGCGCTGCTCGCAGGGGGCGGCGCGAACTACATCACCGCCACTACCGTGTTCGCCGATGGCGGCCTCATGCAGA
ACAGCCCGGGGCTGTGATCC

Downstream 100 bases:

>100_bases
CGGTCCATGGCACGGCGAGCCGAGGTCGGCCTGGTCTACGCGGCGGGGCTCGTCCAAGGGCTCGCGCTGGTAACATTTCC
GGCGGCCAGTTCCATCTTCA

Product: glucose-methanol-choline oxidoreductase

Products: NA

Alternate protein names: Gluconate 2-Dehydrogenase; FAD Dependent Oxidoreductase; Choline Dehydrogenase; Oxidoreductase; Gluconate Dehydrogenase; GMC Oxidoreductase Family Protein; Dehydrogenase; GMC Oxidoreductase; 2-Keto-Gluconate Dehydrogenase; Flavoprotein Related Choline Dehydrogenase; Dehydrogenase Subunit-Like Protein; GMC Oxidoreductase Family; Glucose Dehydrogenase; GMC Family Oxidoreductase; Gluconate 2-Dehydrogenase Flavoprotein; Dehydrogenase Subunit; Dehydrogenase Subunit I; Choline Dehydrogenase-Like Flavoprotein; Glucose-Methanol-Choline Family Oxidoreductase; Dehydrogenase Protein; Glucose Dehydrogenase Subunit Alpha; Oxidoreductase-Like Protein; Dehydrogenase Large Subunit Protein; Dehydrogenase-Like Protein; L-Sorbose Dehydrogenase; FAD-Dependent Pyridine Nucleotide-Disulfide Oxidoreductase; Dehydrogluconate Dehydrogenase; Dehydrogenase Oxidoreductase Protein; Sugar-Alcohol Dehydrogenase; Glucoside 3-Dehydrogenase; Dehydrogenase Flavoprotein Subunit; Glucase Dehydrogenase Subunit Alpha; Transmembrane Dehydrogenase Protein; Solbitol Dehydrogenase Large Subunit; 2-Keto-Gluconate Dehydrogenase Subunit; Quinoprotein Glucose Dehydrogenase; Flavoproteins Oxidoreductases; Glucose Dehydrogenase Alpha Subunit; N-Terminal Membrane-Anchored Dehydrogenase; Oxidoreductase GMC Family Protein; Gluconate Dehydrogenase Subunit; Gluconate 2-Dehydrogenase Alpha Chain; Dehydrogenase Transmembrane Protein

Number of amino acids: Translated: 517; Mature: 516

Protein sequence:

>517_residues
MSVDYDVIIIGSGAGGGTLARQLAPTGKRILILERGDWLKREALNWDAKAVFVDNRYISPDTWYDSRGRAFQPQVHYFVG
GATKMYGAALYRLRREDFGELREYDGISPAWPISYDEMEPFYTKAEQIYQVHGMHGVDPTEPYASAPYPFPPVSHEPRIQ
QLLDNLKAAGYHPFSAPCGVMLKEQDMADSKCIRCQTCDGFPCLVHAKSDAEVLAVRPALQFPNVTLLRNSKVLKLTTDA
GGGSVKEVMVERNGELETFRGDIVVVSCGAANSAKLLLMSASEKHPHGLANGSDQVGRNYMFHNSMAVLAISREPNLTFF
QKTIALNDFYFGMEGFDFPMGNIQMVGKSVGEMYRGEKPLETELAPLGLLNDLARHAVDFWLSTEDLPNPDNRVSLDKQG
NIVLAYTPSNQVPKQKLYDKLKSMLQHLGMHPDHLIPRNAYLKTEIPIAGVAHQAGTCRFGTDPASSVLDVNCKAHELDN
LYVVDTSFFVSIGAVNPALTAMANAIRVGEHIAERLG

Sequences:

>Translated_517_residues
MSVDYDVIIIGSGAGGGTLARQLAPTGKRILILERGDWLKREALNWDAKAVFVDNRYISPDTWYDSRGRAFQPQVHYFVG
GATKMYGAALYRLRREDFGELREYDGISPAWPISYDEMEPFYTKAEQIYQVHGMHGVDPTEPYASAPYPFPPVSHEPRIQ
QLLDNLKAAGYHPFSAPCGVMLKEQDMADSKCIRCQTCDGFPCLVHAKSDAEVLAVRPALQFPNVTLLRNSKVLKLTTDA
GGGSVKEVMVERNGELETFRGDIVVVSCGAANSAKLLLMSASEKHPHGLANGSDQVGRNYMFHNSMAVLAISREPNLTFF
QKTIALNDFYFGMEGFDFPMGNIQMVGKSVGEMYRGEKPLETELAPLGLLNDLARHAVDFWLSTEDLPNPDNRVSLDKQG
NIVLAYTPSNQVPKQKLYDKLKSMLQHLGMHPDHLIPRNAYLKTEIPIAGVAHQAGTCRFGTDPASSVLDVNCKAHELDN
LYVVDTSFFVSIGAVNPALTAMANAIRVGEHIAERLG
>Mature_516_residues
SVDYDVIIIGSGAGGGTLARQLAPTGKRILILERGDWLKREALNWDAKAVFVDNRYISPDTWYDSRGRAFQPQVHYFVGG
ATKMYGAALYRLRREDFGELREYDGISPAWPISYDEMEPFYTKAEQIYQVHGMHGVDPTEPYASAPYPFPPVSHEPRIQQ
LLDNLKAAGYHPFSAPCGVMLKEQDMADSKCIRCQTCDGFPCLVHAKSDAEVLAVRPALQFPNVTLLRNSKVLKLTTDAG
GGSVKEVMVERNGELETFRGDIVVVSCGAANSAKLLLMSASEKHPHGLANGSDQVGRNYMFHNSMAVLAISREPNLTFFQ
KTIALNDFYFGMEGFDFPMGNIQMVGKSVGEMYRGEKPLETELAPLGLLNDLARHAVDFWLSTEDLPNPDNRVSLDKQGN
IVLAYTPSNQVPKQKLYDKLKSMLQHLGMHPDHLIPRNAYLKTEIPIAGVAHQAGTCRFGTDPASSVLDVNCKAHELDNL
YVVDTSFFVSIGAVNPALTAMANAIRVGEHIAERLG

Specific function: Unknown

COG id: COG2303

COG function: function code E; Choline dehydrogenase and related flavoproteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 57115; Mature: 56984

Theoretical pI: Translated: 6.31; Mature: 6.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVDYDVIIIGSGAGGGTLARQLAPTGKRILILERGDWLKREALNWDAKAVFVDNRYISP
CCCCEEEEEEECCCCCHHHHHHHCCCCCEEEEEECCCCHHHHHCCCCCEEEEEECEEECC
DTWYDSRGRAFQPQVHYFVGGATKMYGAALYRLRREDFGELREYDGISPAWPISYDEMEP
CCCCCCCCCEECCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCH
FYTKAEQIYQVHGMHGVDPTEPYASAPYPFPPVSHEPRIQQLLDNLKAAGYHPFSAPCGV
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCE
MLKEQDMADSKCIRCQTCDGFPCLVHAKSDAEVLAVRPALQFPNVTLLRNSKVLKLTTDA
EEECCCCCCCCEEEEECCCCCEEEEECCCCCEEEEEECCCCCCCEEEEECCEEEEEEECC
GGGSVKEVMVERNGELETFRGDIVVVSCGAANSAKLLLMSASEKHPHGLANGSDQVGRNY
CCCHHHHHHHHCCCCEEEECCCEEEEECCCCCCCEEEEEECCCCCCCCCCCCCHHHCCEE
MFHNSMAVLAISREPNLTFFQKTIALNDFYFGMEGFDFPMGNIQMVGKSVGEMYRGEKPL
EEECCEEEEEEECCCCCEEEEHEEEECEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCC
ETELAPLGLLNDLARHAVDFWLSTEDLPNPDNRVSLDKQGNIVLAYTPSNQVPKQKLYDK
HHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCEEEECCCCCEEEEECCCCCCCHHHHHHH
LKSMLQHLGMHPDHLIPRNAYLKTEIPIAGVAHQAGTCRFGTDPASSVLDVNCKAHELDN
HHHHHHHCCCCCCCCCCCCCEEEECCCEEECCCCCCCEECCCCCCCCEEECCCCEECCCC
LYVVDTSFFVSIGAVNPALTAMANAIRVGEHIAERLG
EEEEECEEEEEECCCCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SVDYDVIIIGSGAGGGTLARQLAPTGKRILILERGDWLKREALNWDAKAVFVDNRYISP
CCCEEEEEEECCCCCHHHHHHHCCCCCEEEEEECCCCHHHHHCCCCCEEEEEECEEECC
DTWYDSRGRAFQPQVHYFVGGATKMYGAALYRLRREDFGELREYDGISPAWPISYDEMEP
CCCCCCCCCEECCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCH
FYTKAEQIYQVHGMHGVDPTEPYASAPYPFPPVSHEPRIQQLLDNLKAAGYHPFSAPCGV
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCE
MLKEQDMADSKCIRCQTCDGFPCLVHAKSDAEVLAVRPALQFPNVTLLRNSKVLKLTTDA
EEECCCCCCCCEEEEECCCCCEEEEECCCCCEEEEEECCCCCCCEEEEECCEEEEEEECC
GGGSVKEVMVERNGELETFRGDIVVVSCGAANSAKLLLMSASEKHPHGLANGSDQVGRNY
CCCHHHHHHHHCCCCEEEECCCEEEEECCCCCCCEEEEEECCCCCCCCCCCCCHHHCCEE
MFHNSMAVLAISREPNLTFFQKTIALNDFYFGMEGFDFPMGNIQMVGKSVGEMYRGEKPL
EEECCEEEEEEECCCCCEEEEHEEEECEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCC
ETELAPLGLLNDLARHAVDFWLSTEDLPNPDNRVSLDKQGNIVLAYTPSNQVPKQKLYDK
HHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCEEEECCCCCEEEEECCCCCCCHHHHHHH
LKSMLQHLGMHPDHLIPRNAYLKTEIPIAGVAHQAGTCRFGTDPASSVLDVNCKAHELDN
HHHHHHHCCCCCCCCCCCCCEEEECCCEEECCCCCCCEECCCCCCCCEEECCCCEECCCC
LYVVDTSFFVSIGAVNPALTAMANAIRVGEHIAERLG
EEEEECEEEEEECCCCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA