| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116626540
Identifier: 116626540
GI number: 116626540
Start: 9397097
End: 9398407
Strand: Direct
Name: 116626540
Synonym: Acid_7503
Alternate gene names: NA
Gene position: 9397097-9398407 (Clockwise)
Preceding gene: 116626539
Following gene: 116626543
Centisome position: 94.29
GC content: 59.19
Gene sequence:
>1311_bases ATGTCTACAAGAAATGCACGGCGCGGACAAACAGCGGTGCTGTTTACCTTGGCGATCGTCCCGCTATTTGGAGTCCTTGG GCTGGTGATCGATGTCGGCTGGTCGTACTATCGCAAGGAGGCCGCGCAAACGGCCGCCGACGCAGCCGCAAGTGCGGCAG CGCTAGCCGCGTACAACGCGGCGGGCGCAGGCGCTCCAACCTGCGGCACGACCGGCGTTTCTTGTAATTCGACGGGATAC GACTGTCCCTCTACCTTGACTACGGCCTCCGATAACCTTCAGTCCGGATGCTTGTACGCAATGAGCAACGGATTCACCAC CGCCGGAAAGCAAAAGGTTACCATCCTGTCGGGAACGGGCACTCCCCCGACTGCGTCCGGCGCCTCGGTGGCGTACTGGG TCGAAGTCAAGGTAGTCGAACGGGTCCCGCAATTGTTCTCGGCAGTATTGGGTTTCCCGAACGCACTGGTTGTCGCACGC GCCACCACCGGAACACGGGTGACGAGTTCGGGCGGGTGTGTAATCACGCTGAATCAGAACGCAGATGGTGCCATCACTAT GAACGGAAACACCAGCCTGACCACTGGTTGCGGGGTGTTCGACAATTCTACTGCCGCCGATGCCATCAGCATCGTGGGTG GAGGCACCATTACGACTACCGGGGGTTCGACTACTACGATCTCCGGCGGTTGGCAAGGCAGCGGAACCATCAGTCCCGCG CCTTACACCAATCAGCCGCACATGTCCGATCCATTCGCCGACATGGCTCCGCCTTCGTACTCCGGCTGTGATGACAACAC CATCACTCTGAAAAACAGTCAAAAAAAGACCCTCACGCCATCTGGGAGCACGCCCTACGTGATCTGCGGCGACTTGAGCC TGGGCGCGCAATCGTCTATGACTCTCAACGCCGGCATATACGTGGTGACCGGCTCGATCAGCATGGGGGGACAGACCAGC ATTACGGGAAGCGGCGTCACCTTTTACCTGCCAAACGGCGGCGTGAGCATGGACGGTGGAGCATCGGTTAGTCTCAGCGC GCCAGCCAGCGGTGACTGGCAGGGAATCCTTTTTTACCAGGCTCGCGGAAATAAGACCGCTTCCAGTTTGGTAGGCGGTA CCACTCAGGATTTGGAGGGCGTGATGTATTTTCCAAGCGCCCCGCTCTCGTATACCGGGGGTAGTTCACTGATTGTTTCG CACACCACGATCGTGGCCGACACCTTAAGCCTTGTAGGCAACTCCAACATCGCTACGGCCGCCTCGTCGGCATACACCGG CGTTACCGGCGGCATATCGGTGATCGAGTAG
Upstream 100 bases:
>100_bases TGCTGTTCTTCTGGCCGGGGAAGGGATCGCAAAAGGTCGGTACGATTTGGCTGCCGGCGACTTCCACCCAGCCAATCCTT TTCTAATTCTAAGAGGTTCT
Downstream 100 bases:
>100_bases TCAGCGCGAAGCGACCGGAGTGGCCGTCTTCGCGGCCGCCTGGTCCGCGACGAATTTGCGCCTCTTGCTGCGCAGCGCCA TGTATTCCCTGGCCTCTTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 436; Mature: 435
Protein sequence:
>436_residues MSTRNARRGQTAVLFTLAIVPLFGVLGLVIDVGWSYYRKEAAQTAADAAASAAALAAYNAAGAGAPTCGTTGVSCNSTGY DCPSTLTTASDNLQSGCLYAMSNGFTTAGKQKVTILSGTGTPPTASGASVAYWVEVKVVERVPQLFSAVLGFPNALVVAR ATTGTRVTSSGGCVITLNQNADGAITMNGNTSLTTGCGVFDNSTAADAISIVGGGTITTTGGSTTTISGGWQGSGTISPA PYTNQPHMSDPFADMAPPSYSGCDDNTITLKNSQKKTLTPSGSTPYVICGDLSLGAQSSMTLNAGIYVVTGSISMGGQTS ITGSGVTFYLPNGGVSMDGGASVSLSAPASGDWQGILFYQARGNKTASSLVGGTTQDLEGVMYFPSAPLSYTGGSSLIVS HTTIVADTLSLVGNSNIATAASSAYTGVTGGISVIE
Sequences:
>Translated_436_residues MSTRNARRGQTAVLFTLAIVPLFGVLGLVIDVGWSYYRKEAAQTAADAAASAAALAAYNAAGAGAPTCGTTGVSCNSTGY DCPSTLTTASDNLQSGCLYAMSNGFTTAGKQKVTILSGTGTPPTASGASVAYWVEVKVVERVPQLFSAVLGFPNALVVAR ATTGTRVTSSGGCVITLNQNADGAITMNGNTSLTTGCGVFDNSTAADAISIVGGGTITTTGGSTTTISGGWQGSGTISPA PYTNQPHMSDPFADMAPPSYSGCDDNTITLKNSQKKTLTPSGSTPYVICGDLSLGAQSSMTLNAGIYVVTGSISMGGQTS ITGSGVTFYLPNGGVSMDGGASVSLSAPASGDWQGILFYQARGNKTASSLVGGTTQDLEGVMYFPSAPLSYTGGSSLIVS HTTIVADTLSLVGNSNIATAASSAYTGVTGGISVIE >Mature_435_residues STRNARRGQTAVLFTLAIVPLFGVLGLVIDVGWSYYRKEAAQTAADAAASAAALAAYNAAGAGAPTCGTTGVSCNSTGYD CPSTLTTASDNLQSGCLYAMSNGFTTAGKQKVTILSGTGTPPTASGASVAYWVEVKVVERVPQLFSAVLGFPNALVVARA TTGTRVTSSGGCVITLNQNADGAITMNGNTSLTTGCGVFDNSTAADAISIVGGGTITTTGGSTTTISGGWQGSGTISPAP YTNQPHMSDPFADMAPPSYSGCDDNTITLKNSQKKTLTPSGSTPYVICGDLSLGAQSSMTLNAGIYVVTGSISMGGQTSI TGSGVTFYLPNGGVSMDGGASVSLSAPASGDWQGILFYQARGNKTASSLVGGTTQDLEGVMYFPSAPLSYTGGSSLIVSH TTIVADTLSLVGNSNIATAASSAYTGVTGGISVIE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43514; Mature: 43383
Theoretical pI: Translated: 4.74; Mature: 4.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTRNARRGQTAVLFTLAIVPLFGVLGLVIDVGWSYYRKEAAQTAADAAASAAALAAYNA CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCC AGAGAPTCGTTGVSCNSTGYDCPSTLTTASDNLQSGCLYAMSNGFTTAGKQKVTILSGTG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEEECCC TPPTASGASVAYWVEVKVVERVPQLFSAVLGFPNALVVARATTGTRVTSSGGCVITLNQN CCCCCCCCEEEEEEEEHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEECCCCEEEEECCC ADGAITMNGNTSLTTGCGVFDNSTAADAISIVGGGTITTTGGSTTTISGGWQGSGTISPA CCEEEEECCCCEEEECCCCCCCCCCCCEEEEEECCEEEECCCCEEEECCCCCCCCCCCCC PYTNQPHMSDPFADMAPPSYSGCDDNTITLKNSQKKTLTPSGSTPYVICGDLSLGAQSSM CCCCCCCCCCCCHHCCCCCCCCCCCCEEEEECCCCEEECCCCCCCEEEEECCCCCCCCCE TLNAGIYVVTGSISMGGQTSITGSGVTFYLPNGGVSMDGGASVSLSAPASGDWQGILFYQ EEECCEEEEEECEECCCCCEEECCCEEEEECCCCEECCCCCEEEEECCCCCCCCEEEEEE ARGNKTASSLVGGTTQDLEGVMYFPSAPLSYTGGSSLIVSHTTIVADTLSLVGNSNIATA ECCCCCHHHHCCCCCHHCCEEEEECCCCCCCCCCCEEEEEEHHHHHHHHHHHCCCCCEEC ASSAYTGVTGGISVIE CCCCCCCCCCCEEECC >Mature Secondary Structure STRNARRGQTAVLFTLAIVPLFGVLGLVIDVGWSYYRKEAAQTAADAAASAAALAAYNA CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCC AGAGAPTCGTTGVSCNSTGYDCPSTLTTASDNLQSGCLYAMSNGFTTAGKQKVTILSGTG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEEECCC TPPTASGASVAYWVEVKVVERVPQLFSAVLGFPNALVVARATTGTRVTSSGGCVITLNQN CCCCCCCCEEEEEEEEHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEECCCCEEEEECCC ADGAITMNGNTSLTTGCGVFDNSTAADAISIVGGGTITTTGGSTTTISGGWQGSGTISPA CCEEEEECCCCEEEECCCCCCCCCCCCEEEEEECCEEEECCCCEEEECCCCCCCCCCCCC PYTNQPHMSDPFADMAPPSYSGCDDNTITLKNSQKKTLTPSGSTPYVICGDLSLGAQSSM CCCCCCCCCCCCHHCCCCCCCCCCCCEEEEECCCCEEECCCCCCCEEEEECCCCCCCCCE TLNAGIYVVTGSISMGGQTSITGSGVTFYLPNGGVSMDGGASVSLSAPASGDWQGILFYQ EEECCEEEEEECEECCCCCEEECCCEEEEECCCCEECCCCCEEEEECCCCCCCCEEEEEE ARGNKTASSLVGGTTQDLEGVMYFPSAPLSYTGGSSLIVSHTTIVADTLSLVGNSNIATA ECCCCCHHHHCCCCCHHCCEEEEECCCCCCCCCCCEEEEEEHHHHHHHHHHHCCCCCEEC ASSAYTGVTGGISVIE CCCCCCCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA