| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
Click here to switch to the map view.
The map label for this gene is 116626530
Identifier: 116626530
GI number: 116626530
Start: 9386538
End: 9388109
Strand: Direct
Name: 116626530
Synonym: Acid_7493
Alternate gene names: NA
Gene position: 9386538-9388109 (Clockwise)
Preceding gene: 116626529
Following gene: 116626531
Centisome position: 94.19
GC content: 64.76
Gene sequence:
>1572_bases ATGACCCCAGCCGGATCACCTCCGCCCCAGACCGCGCGGGCCGCGGATACCGCCCCGGCCGCTACACAGCAGCGCGCGCT GTTGTCCGCCATCCTCATCGGGCTGGCGACCGGTTCGCTAGCCTATCTGGCCACCCGCGACCGTCTGACGGTGACCAACG ATGAGGGCATTTATCTAATTAGCGGCCTGAGCGTCTTCCGCGGCGCCGTTCCGTATCGCGATTTTTTTGCGATTACCGGC CCCGGAAACTTCTGGCTACTTGGAGCGATCTTCCGCATGGCCGGAGTTTCGCTCCGCACCGCGCATCTGCTGGTAGCCTG CGATCTCGGAGTCTTGACCGCCCTCGCCTACTGGCTCGCGTCGCGCCTCGCAAGCTGGCGCACGGCGCTCGGATGCGCCC TGCTGTGCTCCGCGCTGTTCCTCTCCAATCCCACCTATGCGCCGCTCAATCATCGCTGGGACAGCAGTACCTTCGCGCTG GCATCGGTCGCGTTGGCGGTGGCCGCCGTCCAGTTTTCCAGCCGGACCGCCGCCTGTCTTGCGGGCATTATCGGAATGCT CGCGGCGTGGATTACCCCGCCGGTCGGATTGATCGCGCTGGTCGTCGCGCCGTGGCTGTGGCTGCGCGGTAAGCCACGAT TGCTCGGCCCCTTCCATGCCGCCGGTGCGGCGCTAGGTGCCCTCCTCCCCGCCGCGATTCTGAACGCGCAGGGTGGCCTT GGCCCCATGCTCCACGCGCTGTTTTGGAACGCGGCGCATTATTCCGCCGCCAATCAGGTCGCCTATGGTTTTTTCTTCGG AGGTCCGGCCGCGCTATTCGCGGGCGTCCATGGCGTGGAATGGCTGCCGCGGATTCTGCTGGCGCTGCCTTTCCTGCTGC CGGCGCTACTGCCCCCTCTGGTAGCCGCGGCCTGGCTGCCGGCATGGCGCGCGCCCAAAAGCCTGGAAGCATTTCTGCTG CTTTGCGGACTGGCATTGGTCGCTTCGAATTATCCGCGCTGGGATCTGCTCCATCTGCTCTACATCTCCCCCGTCTTCCT GATATTGGGAGCGGTCTGGCTGGACCGGCACACCTCCGGACTCTGTGGGATGCTGCTGTTCCTGGCGTTTTTCCTCCCCG CCGGGATGATGTGCCTGCAAAACCTCTCGGGCGGAAGCGAGACTACCGTCGCCACCCCGGTCGGCAGGGTTCAGGTCTCA GAGTCCAACGCGCAGGCTGTCCGCATGAGCGTCGCTCGAATTCGACCTGGCGATTCCTTGTTCGTCTTCCCCTACGAGCC GGTCTTTTACTTCCTGACCGGAGCCCGCAATCCAACCCGGTATTTCTGGCTTCAGCCGGGGATGATGAGCGACCAGGATG AGCGCACGGCCTACGCGGAGCTCAACGCCAATCCGCCGGACTGGATCCTTTACCGCGACATTCCGCCCGCCGAGTACCTG CGCATCTGGCCAGGCACCGATCCCGCACGCCTTCGCTTGTCGCTGATCGAAGACTTCATTCGGACCCGGTACGTCGCCTG TGACCTCGCTCGCGGCGGCGATGGAGAGCGTCAGCTGTTGAAGAGACGCTAG
Upstream 100 bases:
>100_bases CGGCGAAAAATCAGGAGCTTCTCGACTACTATCGCGACCGCAAATTCTGGCTGCTCCAGCCCGATATCGACCCGCTCGCG ATCGTACCCTACACCGAGCC
Downstream 100 bases:
>100_bases CGCGCCAGATGACTTCCCCAGCTCCAACCCGCACCGCCCTCGCTGCCTCCATCTTTCTGCTGGTCGCTGTCGCCCTGTGG ATCCTATCCGCCAACCGGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 523; Mature: 522
Protein sequence:
>523_residues MTPAGSPPPQTARAADTAPAATQQRALLSAILIGLATGSLAYLATRDRLTVTNDEGIYLISGLSVFRGAVPYRDFFAITG PGNFWLLGAIFRMAGVSLRTAHLLVACDLGVLTALAYWLASRLASWRTALGCALLCSALFLSNPTYAPLNHRWDSSTFAL ASVALAVAAVQFSSRTAACLAGIIGMLAAWITPPVGLIALVVAPWLWLRGKPRLLGPFHAAGAALGALLPAAILNAQGGL GPMLHALFWNAAHYSAANQVAYGFFFGGPAALFAGVHGVEWLPRILLALPFLLPALLPPLVAAAWLPAWRAPKSLEAFLL LCGLALVASNYPRWDLLHLLYISPVFLILGAVWLDRHTSGLCGMLLFLAFFLPAGMMCLQNLSGGSETTVATPVGRVQVS ESNAQAVRMSVARIRPGDSLFVFPYEPVFYFLTGARNPTRYFWLQPGMMSDQDERTAYAELNANPPDWILYRDIPPAEYL RIWPGTDPARLRLSLIEDFIRTRYVACDLARGGDGERQLLKRR
Sequences:
>Translated_523_residues MTPAGSPPPQTARAADTAPAATQQRALLSAILIGLATGSLAYLATRDRLTVTNDEGIYLISGLSVFRGAVPYRDFFAITG PGNFWLLGAIFRMAGVSLRTAHLLVACDLGVLTALAYWLASRLASWRTALGCALLCSALFLSNPTYAPLNHRWDSSTFAL ASVALAVAAVQFSSRTAACLAGIIGMLAAWITPPVGLIALVVAPWLWLRGKPRLLGPFHAAGAALGALLPAAILNAQGGL GPMLHALFWNAAHYSAANQVAYGFFFGGPAALFAGVHGVEWLPRILLALPFLLPALLPPLVAAAWLPAWRAPKSLEAFLL LCGLALVASNYPRWDLLHLLYISPVFLILGAVWLDRHTSGLCGMLLFLAFFLPAGMMCLQNLSGGSETTVATPVGRVQVS ESNAQAVRMSVARIRPGDSLFVFPYEPVFYFLTGARNPTRYFWLQPGMMSDQDERTAYAELNANPPDWILYRDIPPAEYL RIWPGTDPARLRLSLIEDFIRTRYVACDLARGGDGERQLLKRR >Mature_522_residues TPAGSPPPQTARAADTAPAATQQRALLSAILIGLATGSLAYLATRDRLTVTNDEGIYLISGLSVFRGAVPYRDFFAITGP GNFWLLGAIFRMAGVSLRTAHLLVACDLGVLTALAYWLASRLASWRTALGCALLCSALFLSNPTYAPLNHRWDSSTFALA SVALAVAAVQFSSRTAACLAGIIGMLAAWITPPVGLIALVVAPWLWLRGKPRLLGPFHAAGAALGALLPAAILNAQGGLG PMLHALFWNAAHYSAANQVAYGFFFGGPAALFAGVHGVEWLPRILLALPFLLPALLPPLVAAAWLPAWRAPKSLEAFLLL CGLALVASNYPRWDLLHLLYISPVFLILGAVWLDRHTSGLCGMLLFLAFFLPAGMMCLQNLSGGSETTVATPVGRVQVSE SNAQAVRMSVARIRPGDSLFVFPYEPVFYFLTGARNPTRYFWLQPGMMSDQDERTAYAELNANPPDWILYRDIPPAEYLR IWPGTDPARLRLSLIEDFIRTRYVACDLARGGDGERQLLKRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 56483; Mature: 56351
Theoretical pI: Translated: 9.30; Mature: 9.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPAGSPPPQTARAADTAPAATQQRALLSAILIGLATGSLAYLATRDRLTVTNDEGIYLI CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEEECCCCEEEE SGLSVFRGAVPYRDFFAITGPGNFWLLGAIFRMAGVSLRTAHLLVACDLGVLTALAYWLA ECHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH SRLASWRTALGCALLCSALFLSNPTYAPLNHRWDSSTFALASVALAVAAVQFSSRTAACL HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHH AGIIGMLAAWITPPVGLIALVVAPWLWLRGKPRLLGPFHAAGAALGALLPAAILNAQGGL HHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCH GPMLHALFWNAAHYSAANQVAYGFFFGGPAALFAGVHGVEWLPRILLALPFLLPALLPPL HHHHHHHHHHHHHHHHHHHEEEEEEECCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH VAAAWLPAWRAPKSLEAFLLLCGLALVASNYPRWDLLHLLYISPVFLILGAVWLDRHTSG HHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC LCGMLLFLAFFLPAGMMCLQNLSGGSETTVATPVGRVQVSESNAQAVRMSVARIRPGDSL HHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCEEEECCCCHHHHHHHHHHCCCCCCE FVFPYEPVFYFLTGARNPTRYFWLQPGMMSDQDERTAYAELNANPPDWILYRDIPPAEYL EEEECCCEEEEEECCCCCCEEEEECCCCCCCCCCCCEEEEECCCCCCEEEEECCCCHHHE RIWPGTDPARLRLSLIEDFIRTRYVACDLARGGDGERQLLKRR EECCCCCHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHCC >Mature Secondary Structure TPAGSPPPQTARAADTAPAATQQRALLSAILIGLATGSLAYLATRDRLTVTNDEGIYLI CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEEECCCCEEEE SGLSVFRGAVPYRDFFAITGPGNFWLLGAIFRMAGVSLRTAHLLVACDLGVLTALAYWLA ECHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH SRLASWRTALGCALLCSALFLSNPTYAPLNHRWDSSTFALASVALAVAAVQFSSRTAACL HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHH AGIIGMLAAWITPPVGLIALVVAPWLWLRGKPRLLGPFHAAGAALGALLPAAILNAQGGL HHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCH GPMLHALFWNAAHYSAANQVAYGFFFGGPAALFAGVHGVEWLPRILLALPFLLPALLPPL HHHHHHHHHHHHHHHHHHHEEEEEEECCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH VAAAWLPAWRAPKSLEAFLLLCGLALVASNYPRWDLLHLLYISPVFLILGAVWLDRHTSG HHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC LCGMLLFLAFFLPAGMMCLQNLSGGSETTVATPVGRVQVSESNAQAVRMSVARIRPGDSL HHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCEEEECCCCHHHHHHHHHHCCCCCCE FVFPYEPVFYFLTGARNPTRYFWLQPGMMSDQDERTAYAELNANPPDWILYRDIPPAEYL EEEECCCEEEEEECCCCCCEEEEECCCCCCCCCCCCEEEEECCCCCCEEEEECCCCHHHE RIWPGTDPARLRLSLIEDFIRTRYVACDLARGGDGERQLLKRR EECCCCCHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA