| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
Click here to switch to the map view.
The map label for this gene is 116626529
Identifier: 116626529
GI number: 116626529
Start: 9385054
End: 9386541
Strand: Direct
Name: 116626529
Synonym: Acid_7492
Alternate gene names: NA
Gene position: 9385054-9386541 (Clockwise)
Preceding gene: 116626525
Following gene: 116626530
Centisome position: 94.17
GC content: 59.95
Gene sequence:
>1488_bases ATGGCAATTACTCTACGGCTCGCCATGCTGCCGGTACTGCCGATTCCTGTGCCGGTCTGCCACGACGAATTCAGCTATTT GCTGGGCTCGGACACATTCGCTTCCGGGCGCGTGACCAACCCCGCGCACCCGATGTGGGTTCATTTCGAGACCTTCCATG TGAACCAGCAGCCCACCTACTGCTCCAAATATCCCCCCGCACAGGCCCTGTTTTTGGCGGCCGGACAGGCATTTTTCGGC CATCCCTGGTTCGGAGTCTGCCTGAGCATGGGGTTGATGTTCGCGGCCCTGTGCTGGATGCTCCTCGCTTGGGTTGAACC CGTACCGGCGCTGCTAACAAGCGTGTTGTGTCTTCTCGGATGGGCATTCACCGGTACGTGGATCAACTCCTATTGGGGCG GAGCCGTGGCCGCAGCCGGGGGAGCATTGCTCGTCGGCGCAATTCCGCGAATCATCACAGCTCCGGGAGCAGCATCCGTT CTGTCTGCGGCATTCGGCGTGGTGCTGTTGGCAAACAGCAGGCCCTACGAAGGACTCTTAACGGTAATCGCGGCTGGGCT GGTGTTCGCGTGGCGGTGGCGTAGCAAAGGCATCCCGTCGGCCTCCGTTTTGGTGCGGACCGCGCTGCCGTTCCTCGCGA TCCTGCTGCCTGCCTTCGCAGCCATGGGTTATTACAATTACCGCACCACGAAAAACCCCGTGCTGATGCCTTATGTCGTA AACCAGCGCACGTACACGGCTTCTCCATTCTTCTACGTCTTACCGCCAGTCCCCGCGCCGGCCTACCGGCACGAGGTGAT CCGGAAGTATTGGGTGGATTGGGTTGTGCCCTTTTACCTTAAGGCGCGCGCCGATCCGAGAGTTGCGATCACCAAGTCGG CGAAGATCATGTGGCGGTTCTATTTCCTGACGCCCATCTTGCCAGCCCTTCTGATCGGCCTGCTATTCGGCGCACGCCGG GATGTGGGCGCAGCTCTGGCGATCGCTGCGGGACCCGTTCTCGGGCTGCTGCCGGCGGAGTCGGCCCTACCCCACTATCT GGCTCCGGCATTCGGCGCTTTCGTGCTGATCGTCGGCCTGGGAATGCAGGCGCTATGGCGATGGCAGTATAAGAACGTCC GCGCCGGCGCAGTTTTGAGCGTTGCGGTGTTGTGGATTTCCCTCGGCTTTTGCGCTCACCAGATCGTTGTCGAAATGTTT CTGATGAAGCATACAGACGCGCCAATCGCCACCAAACCGTTGCTCACCGAACAACTCCAGAAGCAACCCGGAATGCACCT GGTGATCGTACGCTACGGAGCGAATCACAAAATCGACCACGAATGGGTCTACAATCGTGCGGATATCGACGCCTCCAGGA TCGTCTGGGCCCAGGATATGGGCGCGGCGAAAAATCAGGAGCTTCTCGACTACTATCGCGACCGCAAATTCTGGCTGCTC CAGCCCGATATCGACCCGCTCGCGATCGTACCCTACACCGAGCCATGA
Upstream 100 bases:
>100_bases CTACATTACCCGTGTGAGTACAGAGAGCCATTCAGCGCAGGAGGAAGCTCAGGGCCTCGCACCGCAAAACCCCTGGGCGA CCTGGGTGCTGGCTGGCTTT
Downstream 100 bases:
>100_bases CCCCAGCCGGATCACCTCCGCCCCAGACCGCGCGGGCCGCGGATACCGCCCCGGCCGCTACACAGCAGCGCGCGCTGTTG TCCGCCATCCTCATCGGGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 495; Mature: 494
Protein sequence:
>495_residues MAITLRLAMLPVLPIPVPVCHDEFSYLLGSDTFASGRVTNPAHPMWVHFETFHVNQQPTYCSKYPPAQALFLAAGQAFFG HPWFGVCLSMGLMFAALCWMLLAWVEPVPALLTSVLCLLGWAFTGTWINSYWGGAVAAAGGALLVGAIPRIITAPGAASV LSAAFGVVLLANSRPYEGLLTVIAAGLVFAWRWRSKGIPSASVLVRTALPFLAILLPAFAAMGYYNYRTTKNPVLMPYVV NQRTYTASPFFYVLPPVPAPAYRHEVIRKYWVDWVVPFYLKARADPRVAITKSAKIMWRFYFLTPILPALLIGLLFGARR DVGAALAIAAGPVLGLLPAESALPHYLAPAFGAFVLIVGLGMQALWRWQYKNVRAGAVLSVAVLWISLGFCAHQIVVEMF LMKHTDAPIATKPLLTEQLQKQPGMHLVIVRYGANHKIDHEWVYNRADIDASRIVWAQDMGAAKNQELLDYYRDRKFWLL QPDIDPLAIVPYTEP
Sequences:
>Translated_495_residues MAITLRLAMLPVLPIPVPVCHDEFSYLLGSDTFASGRVTNPAHPMWVHFETFHVNQQPTYCSKYPPAQALFLAAGQAFFG HPWFGVCLSMGLMFAALCWMLLAWVEPVPALLTSVLCLLGWAFTGTWINSYWGGAVAAAGGALLVGAIPRIITAPGAASV LSAAFGVVLLANSRPYEGLLTVIAAGLVFAWRWRSKGIPSASVLVRTALPFLAILLPAFAAMGYYNYRTTKNPVLMPYVV NQRTYTASPFFYVLPPVPAPAYRHEVIRKYWVDWVVPFYLKARADPRVAITKSAKIMWRFYFLTPILPALLIGLLFGARR DVGAALAIAAGPVLGLLPAESALPHYLAPAFGAFVLIVGLGMQALWRWQYKNVRAGAVLSVAVLWISLGFCAHQIVVEMF LMKHTDAPIATKPLLTEQLQKQPGMHLVIVRYGANHKIDHEWVYNRADIDASRIVWAQDMGAAKNQELLDYYRDRKFWLL QPDIDPLAIVPYTEP >Mature_494_residues AITLRLAMLPVLPIPVPVCHDEFSYLLGSDTFASGRVTNPAHPMWVHFETFHVNQQPTYCSKYPPAQALFLAAGQAFFGH PWFGVCLSMGLMFAALCWMLLAWVEPVPALLTSVLCLLGWAFTGTWINSYWGGAVAAAGGALLVGAIPRIITAPGAASVL SAAFGVVLLANSRPYEGLLTVIAAGLVFAWRWRSKGIPSASVLVRTALPFLAILLPAFAAMGYYNYRTTKNPVLMPYVVN QRTYTASPFFYVLPPVPAPAYRHEVIRKYWVDWVVPFYLKARADPRVAITKSAKIMWRFYFLTPILPALLIGLLFGARRD VGAALAIAAGPVLGLLPAESALPHYLAPAFGAFVLIVGLGMQALWRWQYKNVRAGAVLSVAVLWISLGFCAHQIVVEMFL MKHTDAPIATKPLLTEQLQKQPGMHLVIVRYGANHKIDHEWVYNRADIDASRIVWAQDMGAAKNQELLDYYRDRKFWLLQ PDIDPLAIVPYTEP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54736; Mature: 54605
Theoretical pI: Translated: 9.55; Mature: 9.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAITLRLAMLPVLPIPVPVCHDEFSYLLGSDTFASGRVTNPAHPMWVHFETFHVNQQPTY CEEEEEEHHHCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCC CSKYPPAQALFLAAGQAFFGHPWFGVCLSMGLMFAALCWMLLAWVEPVPALLTSVLCLLG CCCCCCHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH WAFTGTWINSYWGGAVAAAGGALLVGAIPRIITAPGAASVLSAAFGVVLLANSRPYEGLL HHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHCEEEEECCCCHHHHH TVIAAGLVFAWRWRSKGIPSASVLVRTALPFLAILLPAFAAMGYYNYRTTKNPVLMPYVV HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEE NQRTYTASPFFYVLPPVPAPAYRHEVIRKYWVDWVVPFYLKARADPRVAITKSAKIMWRF CCCEEECCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHH YFLTPILPALLIGLLFGARRDVGAALAIAAGPVLGLLPAESALPHYLAPAFGAFVLIVGL HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCHHEECCCHHCCCHHHHHHHHHHHHHHHH GMQALWRWQYKNVRAGAVLSVAVLWISLGFCAHQIVVEMFLMKHTDAPIATKPLLTEQLQ HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH KQPGMHLVIVRYGANHKIDHEWVYNRADIDASRIVWAQDMGAAKNQELLDYYRDRKFWLL HCCCCEEEEEEECCCCCCCHHHCCCCCCCCHHHEEEEHHCCCCCCHHHHHHHHCCEEEEE QPDIDPLAIVPYTEP CCCCCCEEEECCCCC >Mature Secondary Structure AITLRLAMLPVLPIPVPVCHDEFSYLLGSDTFASGRVTNPAHPMWVHFETFHVNQQPTY EEEEEEHHHCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCC CSKYPPAQALFLAAGQAFFGHPWFGVCLSMGLMFAALCWMLLAWVEPVPALLTSVLCLLG CCCCCCHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH WAFTGTWINSYWGGAVAAAGGALLVGAIPRIITAPGAASVLSAAFGVVLLANSRPYEGLL HHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHCEEEEECCCCHHHHH TVIAAGLVFAWRWRSKGIPSASVLVRTALPFLAILLPAFAAMGYYNYRTTKNPVLMPYVV HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEE NQRTYTASPFFYVLPPVPAPAYRHEVIRKYWVDWVVPFYLKARADPRVAITKSAKIMWRF CCCEEECCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHH YFLTPILPALLIGLLFGARRDVGAALAIAAGPVLGLLPAESALPHYLAPAFGAFVLIVGL HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCHHEECCCHHCCCHHHHHHHHHHHHHHHH GMQALWRWQYKNVRAGAVLSVAVLWISLGFCAHQIVVEMFLMKHTDAPIATKPLLTEQLQ HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH KQPGMHLVIVRYGANHKIDHEWVYNRADIDASRIVWAQDMGAAKNQELLDYYRDRKFWLL HCCCCEEEEEEECCCCCCCHHHCCCCCCCCHHHEEEEHHCCCCCCHHHHHHHHCCEEEEE QPDIDPLAIVPYTEP CCCCCCEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA