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The map label for this gene is yesY [H]

Identifier: 116626517

GI number: 116626517

Start: 9373034

End: 9373798

Strand: Direct

Name: yesY [H]

Synonym: Acid_7480

Alternate gene names: 116626517

Gene position: 9373034-9373798 (Clockwise)

Preceding gene: 116626511

Following gene: 116626524

Centisome position: 94.05

GC content: 61.83

Gene sequence:

>765_bases
ATGCGCGTACTCAAAGCCTTCGGCACCATGGCATTCCTGGCGGCGGCCGCGGCGGCGCAGCCCCCCACGGTCTGGGTAGT
GGGCGATTCCACCGCCAACAATGCAAACCTCCGCGGATGGGGCGACCCGTTCGCCGCGTATTTCGACCCGCAGCTGGCGC
ATACCGTAAATCGTGCCCGGGCAGGCCGCAGCAGCCGCACATTCATCACCGAAGGCCTTTGGGAAAAGGTCCGGGTTGCG
TTAAAGCCCGGCGATTATGTACTGCTTGAAATGGGCCATAACGATGGCAGCGCTCCGGATAAGGACCGCGCGCGCGGGTC
CCTGCCGGGGTTGGGCGAGGAGTCCCAGGAATTCACCCTACCGAACGGCAGCAAGGAAGTGGTTTACACCTTCGGCCACT
ACATGAGGAAGATGATCGCCGAGACCAAGGCCGCGGGCGCCAGCCCGATTGTGCTTGGACTGACCGTGCGTAACATCTGG
AAAGATGGCAAGGTGGAGCGAGGTAACGGAAGATACAGCCAGTGGTCGGCCGAACTCGCCAAGGCTGCTGGCGTGCCCTT
CCTGGACCTCACCAATGCGATAGCTGATCAGTACGACTCCATGGGCGAGGTCAAGGTGAAGGAATGGTTCCCGGAGGACC
ATACCCACACAAGCCCGGAGGGCGCCGATTTCAACGCGTCCATGGTGGTGGCCGCCCTCAAGGGTGCCGAGAGTCCTCTC
GTGGCCTTCCTTTCAGAGAAGGGCAAGGCCGTAAAACCCTATTAG

Upstream 100 bases:

>100_bases
ATTAGAATCCAGAGATTGCAGCATGTAGTGCTAACGTGGCGCGACTGTCTCATGGTAACCCAAGCATCCCGCGTACCCAA
AGCAGTAAAATGGCAGTCAA

Downstream 100 bases:

>100_bases
GTTTTGTTCTTGGCGTGACTTTGCGGCTTTGCGAGAACCTGCAGCCCTCCTGCGCGGACTAATTACCTGACGTAGTGCAA
ACCAATTTTGCGGTCAGCGC

Product: GDSL family lipase

Products: NA

Alternate protein names: RGAE [H]

Number of amino acids: Translated: 254; Mature: 254

Protein sequence:

>254_residues
MRVLKAFGTMAFLAAAAAAQPPTVWVVGDSTANNANLRGWGDPFAAYFDPQLAHTVNRARAGRSSRTFITEGLWEKVRVA
LKPGDYVLLEMGHNDGSAPDKDRARGSLPGLGEESQEFTLPNGSKEVVYTFGHYMRKMIAETKAAGASPIVLGLTVRNIW
KDGKVERGNGRYSQWSAELAKAAGVPFLDLTNAIADQYDSMGEVKVKEWFPEDHTHTSPEGADFNASMVVAALKGAESPL
VAFLSEKGKAVKPY

Sequences:

>Translated_254_residues
MRVLKAFGTMAFLAAAAAAQPPTVWVVGDSTANNANLRGWGDPFAAYFDPQLAHTVNRARAGRSSRTFITEGLWEKVRVA
LKPGDYVLLEMGHNDGSAPDKDRARGSLPGLGEESQEFTLPNGSKEVVYTFGHYMRKMIAETKAAGASPIVLGLTVRNIW
KDGKVERGNGRYSQWSAELAKAAGVPFLDLTNAIADQYDSMGEVKVKEWFPEDHTHTSPEGADFNASMVVAALKGAESPL
VAFLSEKGKAVKPY
>Mature_254_residues
MRVLKAFGTMAFLAAAAAAQPPTVWVVGDSTANNANLRGWGDPFAAYFDPQLAHTVNRARAGRSSRTFITEGLWEKVRVA
LKPGDYVLLEMGHNDGSAPDKDRARGSLPGLGEESQEFTLPNGSKEVVYTFGHYMRKMIAETKAAGASPIVLGLTVRNIW
KDGKVERGNGRYSQWSAELAKAAGVPFLDLTNAIADQYDSMGEVKVKEWFPEDHTHTSPEGADFNASMVVAALKGAESPL
VAFLSEKGKAVKPY

Specific function: May play role in the degradation of rhamnogalacturonan derived from plant cell walls. Probably has broad substrate specificity and may degrade several types of acetylated substrates [H]

COG id: COG2755

COG function: function code E; Lysophospholipase L1 and related esterases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'GDSL' lipolytic enzyme family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013830
- InterPro:   IPR013831
- InterPro:   IPR001087 [H]

Pfam domain/function: PF00657 Lipase_GDSL [H]

EC number: NA

Molecular weight: Translated: 27461; Mature: 27461

Theoretical pI: Translated: 7.86; Mature: 7.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVLKAFGTMAFLAAAAAAQPPTVWVVGDSTANNANLRGWGDPFAAYFDPQLAHTVNRAR
CCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHH
AGRSSRTFITEGLWEKVRVALKPGDYVLLEMGHNDGSAPDKDRARGSLPGLGEESQEFTL
CCCCCCHHHHHHHHHHHEEEECCCCEEEEEECCCCCCCCCHHHHCCCCCCCCCCCCEEEC
PNGSKEVVYTFGHYMRKMIAETKAAGASPIVLGLTVRNIWKDGKVERGNGRYSQWSAELA
CCCCHHEEHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHCCCCEECCCCCHHHHHHHHH
KAAGVPFLDLTNAIADQYDSMGEVKVKEWFPEDHTHTSPEGADFNASMVVAALKGAESPL
HHCCCCHHHHHHHHHHHHHCCCCEEHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHH
VAFLSEKGKAVKPY
HHHHHCCCCCCCCC
>Mature Secondary Structure
MRVLKAFGTMAFLAAAAAAQPPTVWVVGDSTANNANLRGWGDPFAAYFDPQLAHTVNRAR
CCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHH
AGRSSRTFITEGLWEKVRVALKPGDYVLLEMGHNDGSAPDKDRARGSLPGLGEESQEFTL
CCCCCCHHHHHHHHHHHEEEECCCCEEEEEECCCCCCCCCHHHHCCCCCCCCCCCCEEEC
PNGSKEVVYTFGHYMRKMIAETKAAGASPIVLGLTVRNIWKDGKVERGNGRYSQWSAELA
CCCCHHEEHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHCCCCEECCCCCHHHHHHHHH
KAAGVPFLDLTNAIADQYDSMGEVKVKEWFPEDHTHTSPEGADFNASMVVAALKGAESPL
HHCCCCHHHHHHHHHHHHHCCCCEEHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHH
VAFLSEKGKAVKPY
HHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]