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The map label for this gene is fliP [H]

Identifier: 116626498

GI number: 116626498

Start: 9351115

End: 9351852

Strand: Direct

Name: fliP [H]

Synonym: Acid_7461

Alternate gene names: 116626498

Gene position: 9351115-9351852 (Clockwise)

Preceding gene: 116626497

Following gene: 116626499

Centisome position: 93.83

GC content: 60.7

Gene sequence:

>738_bases
GTGAGCTGGCGGCGAATCCTGGTCTGTGCCTTGGGCGGCGCGCAGCTGGCGGCCGCGGCGGCTACCGAGCCGTTCTCTCT
GCTCGGCATCTCGGCAGGGAAGAACGGAGTATCGCTGAGCGTGCCGATGCAGATCGTCATTCTGCTGACTTTGATGACGC
TTCTGCCCGCGGCGGTCATGTCGATCACGCCGTTCCTACGCATCGTGGTGGTACTGCACTTTCTGCGGCAGGCGCTGGGC
ACGCAATCCACGCCCAGCAATCAAGTCTTAATCGGGCTGGCTCTATTCTTGGCCCTGCTGGTGATGCAGCCGGTCATCGC
AGACATGTACCACCAGGGATGGGAGCCGATGGAAGCTGGGCAACTTTCCCCCGAAAGGGCGTTAGAGCAGGGTTCGGTGC
CGCTGCATAACTTTCTGGCCAAATTCGCCCGGGAAAAGGACATTCACCTGTTCGTCGAGATCTCGCACGCGCCCGCGCCG
CGGACTCCGGCGGACCTCGAGATGAAAGTGCTGATCCCGGCCTACATCCTCTCGGAGCTGAAGACCGGATTTCAGATCGG
CGCGGTGCTGTTTCTGCCGTTCCTGATTATCGACCTGGTGATCGCGTCGGTGACGCTTTCGATCGGCATGGTGCAACTGC
CGCCGGTGATGATTTCCGCTCCCTTCAAGATTCTCCTTTTCGTGCTGGTGGACGGCTGGAACCTGGTGGTGGGCTCGCTG
ATGAGGAGTTTCTACTGA

Upstream 100 bases:

>100_bases
ATCTGGTTCGCATGGGGGAGATTGAGCTGCTGCTCTCGTCGTCGGCTTCGGGTTGCACGCTGTTGAAGAGCTTCGAGCCG
CGCCGCGCGGAGGAATGCCG

Downstream 100 bases:

>100_bases
TGACGCCGGAAACCGTGGTGCAGATTATCCGGCAGGCCCTGATGACGACCTTCTGGCTGGCTGCGCCGCTGCTGGCGATC
GGGTTTCTGGCGGGCATCGT

Product: flagellar biosynthesis protein FliP

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 245; Mature: 244

Protein sequence:

>245_residues
MSWRRILVCALGGAQLAAAAATEPFSLLGISAGKNGVSLSVPMQIVILLTLMTLLPAAVMSITPFLRIVVVLHFLRQALG
TQSTPSNQVLIGLALFLALLVMQPVIADMYHQGWEPMEAGQLSPERALEQGSVPLHNFLAKFAREKDIHLFVEISHAPAP
RTPADLEMKVLIPAYILSELKTGFQIGAVLFLPFLIIDLVIASVTLSIGMVQLPPVMISAPFKILLFVLVDGWNLVVGSL
MRSFY

Sequences:

>Translated_245_residues
MSWRRILVCALGGAQLAAAAATEPFSLLGISAGKNGVSLSVPMQIVILLTLMTLLPAAVMSITPFLRIVVVLHFLRQALG
TQSTPSNQVLIGLALFLALLVMQPVIADMYHQGWEPMEAGQLSPERALEQGSVPLHNFLAKFAREKDIHLFVEISHAPAP
RTPADLEMKVLIPAYILSELKTGFQIGAVLFLPFLIIDLVIASVTLSIGMVQLPPVMISAPFKILLFVLVDGWNLVVGSL
MRSFY
>Mature_244_residues
SWRRILVCALGGAQLAAAAATEPFSLLGISAGKNGVSLSVPMQIVILLTLMTLLPAAVMSITPFLRIVVVLHFLRQALGT
QSTPSNQVLIGLALFLALLVMQPVIADMYHQGWEPMEAGQLSPERALEQGSVPLHNFLAKFAREKDIHLFVEISHAPAPR
TPADLEMKVLIPAYILSELKTGFQIGAVLFLPFLIIDLVIASVTLSIGMVQLPPVMISAPFKILLFVLVDGWNLVVGSLM
RSFY

Specific function: Plays a role in the flagellum-specific transport system [H]

COG id: COG1338

COG function: function code NU; Flagellar biosynthesis pathway, component FliP

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein. Bacterial flagellum basal body (By similarity) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliP/mopC/spaP family [H]

Homologues:

Organism=Escherichia coli, GI1788259, Length=211, Percent_Identity=48.8151658767773, Blast_Score=212, Evalue=2e-56,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005837
- InterPro:   IPR005838 [H]

Pfam domain/function: PF00813 FliP [H]

EC number: NA

Molecular weight: Translated: 26577; Mature: 26446

Theoretical pI: Translated: 7.73; Mature: 7.73

Prosite motif: PS01061 FLIP_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSWRRILVCALGGAQLAAAAATEPFSLLGISAGKNGVSLSVPMQIVILLTLMTLLPAAVM
CCCCEEEEEECCCHHHHHHHCCCCHHHEEECCCCCCCEEEHHHHHHHHHHHHHHHHHHHH
SITPFLRIVVVLHFLRQALGTQSTPSNQVLIGLALFLALLVMQPVIADMYHQGWEPMEAG
HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
QLSPERALEQGSVPLHNFLAKFAREKDIHLFVEISHAPAPRTPADLEMKVLIPAYILSEL
CCCHHHHHHCCCCCHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHH
KTGFQIGAVLFLPFLIIDLVIASVTLSIGMVQLPPVMISAPFKILLFVLVDGWNLVVGSL
HCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCHHHHCHHHHHHHHHHCCHHHHHHHH
MRSFY
HHHCC
>Mature Secondary Structure 
SWRRILVCALGGAQLAAAAATEPFSLLGISAGKNGVSLSVPMQIVILLTLMTLLPAAVM
CCCEEEEEECCCHHHHHHHCCCCHHHEEECCCCCCCEEEHHHHHHHHHHHHHHHHHHHH
SITPFLRIVVVLHFLRQALGTQSTPSNQVLIGLALFLALLVMQPVIADMYHQGWEPMEAG
HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
QLSPERALEQGSVPLHNFLAKFAREKDIHLFVEISHAPAPRTPADLEMKVLIPAYILSEL
CCCHHHHHHCCCCCHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHH
KTGFQIGAVLFLPFLIIDLVIASVTLSIGMVQLPPVMISAPFKILLFVLVDGWNLVVGSL
HCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCHHHHCHHHHHHHHHHCCHHHHHHHH
MRSFY
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]