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The map label for this gene is ycdQ [C]

Identifier: 116626479

GI number: 116626479

Start: 9334550

End: 9335599

Strand: Direct

Name: ycdQ [C]

Synonym: Acid_7442

Alternate gene names: 116626479

Gene position: 9334550-9335599 (Clockwise)

Preceding gene: 116626478

Following gene: 116626480

Centisome position: 93.67

GC content: 57.05

Gene sequence:

>1050_bases
ATGGCGCACAACGACGTCGTATCCGTCACCATTGTGACTTATAACAGCGGCAGGTTTATCAAACGCTGCCTCGAATCCGT
GCTCGCGCAAAGATACCAGCCCAAAGAAATCATCATCGTTGATAACGCATCCAACGACGGCACAATCGACATCCTCGAAC
AGTTCGAAGACCGCTGCCAGGTTTACTACAACAACGAAAACATTGGTTTCGCCGCGGCTCAAAATCAGGCCATCCGCATG
TCCAGCGGAGATTGGGTCCTGACTCTGAATCCGGACGTGCTGCTGCTGCCGAATTTTATTCAGGCACTCGTCGATGCCGG
ACAACTGGATCCCAAGATCGGCACTGTCTGCGGCAAACTGCTGACGATGACGAGCCATTTCGAGATCCCCGAAAAGCCCG
TCGTGGATTCCACCGGTATTTATTTCAATCCGATGCTGCGCCATCTGGATCGGGGCAGCCAGGAAGTGGATAACGGCCAT
TATCTGCAATACGAATACGTGTTCGGCGCGACCGCGGCCGCCGCGCTTTACCGCCGCGGCATGGTTGACGATATCGCGCT
CGATGGCGAATTCTTCGATACCGATTTCTTTGTTTACCGCGAAGATGCCGATGTCGCGTGGCGCGCCCAGTTGATGGGCT
GGAAGTGCCTCTACGCCCCTTATGCCCGCGGCTATCATGTGCGCAAAGTGCTGCCCGGCAATCGCCGAGCGCTGCCGCCC
GAGATCAACATGCACTCGGTGAAGAACCGCTTCCTGATGCGCATCAAGAACATCTCGCCCGATCTCTACTGGCGCAACTG
GTTCTCCATCACCGCCCGCGACCTGATGGTAGTGACGTGCTGCCTACTCTGGGAGCATAGTTCCCTTCGCGCGTTCTGGT
ACCTTGGCCGGAACCTGCGCGGAGTGCTCGCCAAGCGCAGGAGAATTCAGGCCACGCGCCGCGTGGACGATCAGTACATG
GCAAGCTGGTTCCAATACGCGCCCGTTAGCAAACAGGCGCCCAAGAAGATGGTCCGCATGCTCTCGCGATCGGAAACCGC
CAAGACGTAA

Upstream 100 bases:

>100_bases
TATTGCTGCCTATGGCAGGATAGCCAGCTTTGCGGGGCGGTGTTTGCTGTTCGGGTTTTAAGAGATACGTTGTACATATC
GGACTCTCAGGTTCTTGTTC

Downstream 100 bases:

>100_bases
GCGGGCCTACCCGTCCGGAGCGCGCATGAGAATTGCGATCCTCGGCACGCGCGGCATTCCCGCCAACTATGGCGGATTTG
AAACCTTCGCGGAGGAACTC

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: Glycosyltransferase; Glycosyl Transferase; Glycosyl Transferase Group 2 Family Protein; Family 2 Glycosyl Transferase; Glycosyl Transferase Group 2 Family; Glycosyl Transferase Family 2 Protein; B-Glycosyltransferase; Glycosyltransferase/Rhamnosyltransferase; Glycosyltransferase Domain-Containing Protein; Glycosyl Transferase GT2 Family Protein; Glycosyl Transferase GT2 Family; Glycosyltransferase Protein; Bifunctional SAM-Dependent Methyltransferase Type; Family 2 Glycosyltransferase; Group 2 Family Glycosyltransferase; Cell Wall Biosynthesis Glycosyltransferase-Like Protein; Glycosyl Transferase Group 1/2 Family Protein; Beta-1 3-Galactosyltransferase; Rhamnosyl Transferase; Glucosyltransferase

Number of amino acids: Translated: 349; Mature: 348

Protein sequence:

>349_residues
MAHNDVVSVTIVTYNSGRFIKRCLESVLAQRYQPKEIIIVDNASNDGTIDILEQFEDRCQVYYNNENIGFAAAQNQAIRM
SSGDWVLTLNPDVLLLPNFIQALVDAGQLDPKIGTVCGKLLTMTSHFEIPEKPVVDSTGIYFNPMLRHLDRGSQEVDNGH
YLQYEYVFGATAAAALYRRGMVDDIALDGEFFDTDFFVYREDADVAWRAQLMGWKCLYAPYARGYHVRKVLPGNRRALPP
EINMHSVKNRFLMRIKNISPDLYWRNWFSITARDLMVVTCCLLWEHSSLRAFWYLGRNLRGVLAKRRRIQATRRVDDQYM
ASWFQYAPVSKQAPKKMVRMLSRSETAKT

Sequences:

>Translated_349_residues
MAHNDVVSVTIVTYNSGRFIKRCLESVLAQRYQPKEIIIVDNASNDGTIDILEQFEDRCQVYYNNENIGFAAAQNQAIRM
SSGDWVLTLNPDVLLLPNFIQALVDAGQLDPKIGTVCGKLLTMTSHFEIPEKPVVDSTGIYFNPMLRHLDRGSQEVDNGH
YLQYEYVFGATAAAALYRRGMVDDIALDGEFFDTDFFVYREDADVAWRAQLMGWKCLYAPYARGYHVRKVLPGNRRALPP
EINMHSVKNRFLMRIKNISPDLYWRNWFSITARDLMVVTCCLLWEHSSLRAFWYLGRNLRGVLAKRRRIQATRRVDDQYM
ASWFQYAPVSKQAPKKMVRMLSRSETAKT
>Mature_348_residues
AHNDVVSVTIVTYNSGRFIKRCLESVLAQRYQPKEIIIVDNASNDGTIDILEQFEDRCQVYYNNENIGFAAAQNQAIRMS
SGDWVLTLNPDVLLLPNFIQALVDAGQLDPKIGTVCGKLLTMTSHFEIPEKPVVDSTGIYFNPMLRHLDRGSQEVDNGHY
LQYEYVFGATAAAALYRRGMVDDIALDGEFFDTDFFVYREDADVAWRAQLMGWKCLYAPYARGYHVRKVLPGNRRALPPE
INMHSVKNRFLMRIKNISPDLYWRNWFSITARDLMVVTCCLLWEHSSLRAFWYLGRNLRGVLAKRRRIQATRRVDDQYMA
SWFQYAPVSKQAPKKMVRMLSRSETAKT

Specific function: Unknown

COG id: COG1216

COG function: function code R; Predicted glycosyltransferases

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787259, Length=222, Percent_Identity=23.4234234234234, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40264; Mature: 40133

Theoretical pI: Translated: 8.88; Mature: 8.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAHNDVVSVTIVTYNSGRFIKRCLESVLAQRYQPKEIIIVDNASNDGTIDILEQFEDRCQ
CCCCCEEEEEEEEECCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHCCEE
VYYNNENIGFAAAQNQAIRMSSGDWVLTLNPDVLLLPNFIQALVDAGQLDPKIGTVCGKL
EEECCCCCEEEECCCCEEEECCCCEEEEECCCEEECCHHHHHHHCCCCCCCHHHHHHHHH
LTMTSHFEIPEKPVVDSTGIYFNPMLRHLDRGSQEVDNGHYLQYEYVFGATAAAALYRRG
HHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCEEEEEEEECHHHHHHHHHCC
MVDDIALDGEFFDTDFFVYREDADVAWRAQLMGWKCLYAPYARGYHVRKVLPGNRRALPP
CCCCEEECCCEECCEEEEEECCCCHHHHHHHCCCEEEECCCCCCEEEEEECCCCCCCCCC
EINMHSVKNRFLMRIKNISPDLYWRNWFSITARDLMVVTCCLLWEHSSLRAFWYLGRNLR
CCCHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHH
GVLAKRRRIQATRRVDDQYMASWFQYAPVSKQAPKKMVRMLSRSETAKT
HHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
AHNDVVSVTIVTYNSGRFIKRCLESVLAQRYQPKEIIIVDNASNDGTIDILEQFEDRCQ
CCCCEEEEEEEEECCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHCCEE
VYYNNENIGFAAAQNQAIRMSSGDWVLTLNPDVLLLPNFIQALVDAGQLDPKIGTVCGKL
EEECCCCCEEEECCCCEEEECCCCEEEEECCCEEECCHHHHHHHCCCCCCCHHHHHHHHH
LTMTSHFEIPEKPVVDSTGIYFNPMLRHLDRGSQEVDNGHYLQYEYVFGATAAAALYRRG
HHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCEEEEEEEECHHHHHHHHHCC
MVDDIALDGEFFDTDFFVYREDADVAWRAQLMGWKCLYAPYARGYHVRKVLPGNRRALPP
CCCCEEECCCEECCEEEEEECCCCHHHHHHHCCCEEEECCCCCCEEEEEECCCCCCCCCC
EINMHSVKNRFLMRIKNISPDLYWRNWFSITARDLMVVTCCLLWEHSSLRAFWYLGRNLR
CCCHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHH
GVLAKRRRIQATRRVDDQYMASWFQYAPVSKQAPKKMVRMLSRSETAKT
HHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA