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The map label for this gene is 116626439

Identifier: 116626439

GI number: 116626439

Start: 9286416

End: 9287165

Strand: Direct

Name: 116626439

Synonym: Acid_7401

Alternate gene names: NA

Gene position: 9286416-9287165 (Clockwise)

Preceding gene: 116626438

Following gene: 116626440

Centisome position: 93.18

GC content: 59.07

Gene sequence:

>750_bases
ATGGGACTGCCCCCAACAAAGGACCTCCGCATGAGCACAATTGCGATCAATCCCGTGAACCGGGTCGTCCGCTTCTATGA
GGCGCCAATCGGCAAGAAGGCGATCATGGCCGTTACCGGCGTGATACTTTTCGGCTACGTGGTGGCGCACCTGCTGGGCA
ACCTGCAAATTTACCTACCCGCGGGCGCGAACGGCGAATATCAGATCAACCACTATGCCGCTTTCCTGCACAGTTCCGGG
AATGCCGGATTACTGATGGCCGCACGGCTGTTCCTGCTGGTGGCGGTGGGATTGCACATCATGGCATCGATCCAGTTGTG
GAAGCTAAAGGGCGATGCGCGTCCGGTAGCTTACAAGAAGAAGGACGACGCGTCGGCGACGTATGCATCGCGGACCATGA
TGTGGAGCGGGCCGATCATCGCGGCGTTCGTGATATTCCACGTGCTGCACCTGACGGTCGGCGTGGTGGGGCCGGCGCCG
GCGGCGGAGTTGGCAGCCAACTCGCCGAATGTACGCGCCAACCTGATCGCGGGATTTCAGAACCCGGCGATTTCGGGCTT
CTACATTCTGGCGATGATTCTGCTGTGCATGCACCTGTACCACGGGTTGTGGAGCATGTTCCAGAGCCTGGGCTTCAGCC
ATCCGCGGTACACACCGATTCTGAAGAAGGGCGCGGCGATTTTCGCCATCCTGATTGCGATTGGCAACTGCTCGATACCG
ATCGCTGTTTTAGCCGGACTGGTCAGTTAA

Upstream 100 bases:

>100_bases
CGTGAAGGGCATTAAGCCGCCGACGTACGTATTTTGATAGCCCGCCGCGTGCGTATAATGGAAGTTTGAAACCCACATCT
CTGTTTGGGACAGCCCTGCC

Downstream 100 bases:

>100_bases
GAGAGACCCAGCATGGAACTCAATTCAAAAGCCCCGACAGGCCCGATCGAGACGCGATGGGAACGTCATCGCTTCAATCT
CAAGCTGGTGAATCCGGCCA

Product: succinate dehydrogenase subunit C

Products: fumarate; reduced acceptor

Alternate protein names: Succinate Dehydrogenase Subunit C; Cytochrome B Subunit; Succinate Dehydrogenase Subunit; Fumarate Reductase Cytochrome B Subunit; SuccinateQuinone Oxidoreductase-Like Protein; Succinate Dehydrogenase/Fumarate Reductase Cytochrome; Succinate Dehydrogenase Cytochrome Subunit B; Succinate Dehydrogenease Cytochrome B Subunit; Succinate Dehydrogenase Cytochrome B Subunit SdhC; Succinate Dehydrogenase Cytochrome; Succinate Dehydrogenase Subunit C/Fumarate Reductase

Number of amino acids: Translated: 249; Mature: 248

Protein sequence:

>249_residues
MGLPPTKDLRMSTIAINPVNRVVRFYEAPIGKKAIMAVTGVILFGYVVAHLLGNLQIYLPAGANGEYQINHYAAFLHSSG
NAGLLMAARLFLLVAVGLHIMASIQLWKLKGDARPVAYKKKDDASATYASRTMMWSGPIIAAFVIFHVLHLTVGVVGPAP
AAELAANSPNVRANLIAGFQNPAISGFYILAMILLCMHLYHGLWSMFQSLGFSHPRYTPILKKGAAIFAILIAIGNCSIP
IAVLAGLVS

Sequences:

>Translated_249_residues
MGLPPTKDLRMSTIAINPVNRVVRFYEAPIGKKAIMAVTGVILFGYVVAHLLGNLQIYLPAGANGEYQINHYAAFLHSSG
NAGLLMAARLFLLVAVGLHIMASIQLWKLKGDARPVAYKKKDDASATYASRTMMWSGPIIAAFVIFHVLHLTVGVVGPAP
AAELAANSPNVRANLIAGFQNPAISGFYILAMILLCMHLYHGLWSMFQSLGFSHPRYTPILKKGAAIFAILIAIGNCSIP
IAVLAGLVS
>Mature_248_residues
GLPPTKDLRMSTIAINPVNRVVRFYEAPIGKKAIMAVTGVILFGYVVAHLLGNLQIYLPAGANGEYQINHYAAFLHSSGN
AGLLMAARLFLLVAVGLHIMASIQLWKLKGDARPVAYKKKDDASATYASRTMMWSGPIIAAFVIFHVLHLTVGVVGPAPA
AELAANSPNVRANLIAGFQNPAISGFYILAMILLCMHLYHGLWSMFQSLGFSHPRYTPILKKGAAIFAILIAIGNCSIPI
AVLAGLVS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.3.99.1

Molecular weight: Translated: 26680; Mature: 26549

Theoretical pI: Translated: 10.25; Mature: 10.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLPPTKDLRMSTIAINPVNRVVRFYEAPIGKKAIMAVTGVILFGYVVAHLLGNLQIYLP
CCCCCCCCCEEEEEEECHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEE
AGANGEYQINHYAAFLHSSGNAGLLMAARLFLLVAVGLHIMASIQLWKLKGDARPVAYKK
CCCCCCEEHHHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCC
KDDASATYASRTMMWSGPIIAAFVIFHVLHLTVGVVGPAPAAELAANSPNVRANLIAGFQ
CCCCCHHHHHHEEEECCHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCEEEEEECCC
NPAISGFYILAMILLCMHLYHGLWSMFQSLGFSHPRYTPILKKGAAIFAILIAIGNCSIP
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCH
IAVLAGLVS
HHHHHHHCC
>Mature Secondary Structure 
GLPPTKDLRMSTIAINPVNRVVRFYEAPIGKKAIMAVTGVILFGYVVAHLLGNLQIYLP
CCCCCCCCEEEEEEECHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEE
AGANGEYQINHYAAFLHSSGNAGLLMAARLFLLVAVGLHIMASIQLWKLKGDARPVAYKK
CCCCCCEEHHHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCC
KDDASATYASRTMMWSGPIIAAFVIFHVLHLTVGVVGPAPAAELAANSPNVRANLIAGFQ
CCCCCHHHHHHEEEECCHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCEEEEEECCC
NPAISGFYILAMILLCMHLYHGLWSMFQSLGFSHPRYTPILKKGAAIFAILIAIGNCSIP
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCH
IAVLAGLVS
HHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: succinate; acceptor

Specific reaction: succinate + acceptor = fumarate + reduced acceptor

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA