| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
Click here to switch to the map view.
The map label for this gene is gluP [H]
Identifier: 116626429
GI number: 116626429
Start: 9272719
End: 9273930
Strand: Direct
Name: gluP [H]
Synonym: Acid_7391
Alternate gene names: 116626429
Gene position: 9272719-9273930 (Clockwise)
Preceding gene: 116626428
Following gene: 116626438
Centisome position: 93.05
GC content: 63.28
Gene sequence:
>1212_bases GTGGCGGGGCTGATGGAACACGATAAGAGCAAGAACGGGCTGGCGCTGGCGGTGGTGACCACGGTGTTTTTCATGTGGGG CTTCGTCACCGTGCTGAACGATATTCTGGTGCCGCATCTCAAGGCGCTGTTCGAGCTGAATTACACGCAGACGATGCTGA TTCAGTTCACGTTTTTTTCGGCGTACTTTCTGATGTCCACACCTTCGTCGCGCGTTTTGGCGCGGGTAGGGTATCAGCGA TCGATCGTGATCGGGCTGGTTGTGATGGGGCTGGGAGCGCTCGGGTTCGTACCGGCCTCGGCGGCGCGAAGCTACGCGAT TTTTCTGGGGGCGCTCTGGGTACTGGCGTCGGGGATCACGCTGCTGCAGGTGGCGGCGAACCCCTACGTGGCGCAGCTCG GGCCGCCGGCGAAGGGGTCGAGCCGGTTAAACCTGGCGCAGGCGTTCAACTCGCTGGGGACGACGATCGCGCCGTACCTG GGCGGAATGTTGATTCTCTCGGAGACTTCCGGTCGGGCGGATGCGGGCGCGGTGCAGGGGCCGTACGTCGCGATCGCGAT CACGTTGTTCCTGCTGGCGTTCGGGGTTTCGCGATTTCATCTCCCGGCGCTGCCCGATATCGAGGAGGGGCACGGGGTGT TGGCGGGCGACAGCATCTGGAAGCACCGGCACCTGGTGCTGGGTGCGGTCGCGATCTTCGTGTACGTAGGCGCGGAGGTA TCCATCGGCAGTTTCCTGGTGAATTATTTTTCGCAGCCCGATATCGGCGGGTTGACGGAGCGGGCGGCGGCGGGCTTCGT CTCCTTCTATTGGGGCGGCGCGATGGCCGGGCGGTTCATCGGGTCGGCGCTGCTGCGAACGGCGGCACCCGGCAAATTGC TGGGCTGCGCGGCGCTGGCGGCATGCGCACTGGTGCTGACCACGGTGGCCACTACCGGCGCAACGGCAATGTGGAGCGTG ATCGCGGTGGGGTTATTCAACTCGGTCATGTTCCCGACGATTTTCACGCTGGGAATCGCGCGGTTGGGACCGCTGACCGG GAAGGGATCAAGCCTTTTGATCATGGCGATCGTGGGAGGCGCAATTCTCCCTGTGTTGCAGGGGGCGCTGGCCGATTCGA TCGGCATTCACACGGCGTTTCTGATGCCTGCGGTCTGTTATCTCTATATCGTGTATTACGGCTGGCGCGGATCGCGGGCG TCAGAGGCGTAG
Upstream 100 bases:
>100_bases GGTACATGACGTAGGGAGAACGGGACCTGCGCACTCCGCGGGCGAAGCCGGCTGAAAGCCGGCTGCAGGCAGGATTGCCT GCCCCACGAAACAGGTTATA
Downstream 100 bases:
>100_bases GGCGAGGTTGGCGGGCGGCTCGGGAGCGCGCTGCGGGGCCGGCTGGGGAACAGCGTCAAAACGAACCCGATTCGTGGGTA GAGGAGTCGCAGCTTCGGCC
Product: glucose/galactose transporter
Products: Proton [Cytoplasm]; L-fucose [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 403; Mature: 402
Protein sequence:
>403_residues MAGLMEHDKSKNGLALAVVTTVFFMWGFVTVLNDILVPHLKALFELNYTQTMLIQFTFFSAYFLMSTPSSRVLARVGYQR SIVIGLVVMGLGALGFVPASAARSYAIFLGALWVLASGITLLQVAANPYVAQLGPPAKGSSRLNLAQAFNSLGTTIAPYL GGMLILSETSGRADAGAVQGPYVAIAITLFLLAFGVSRFHLPALPDIEEGHGVLAGDSIWKHRHLVLGAVAIFVYVGAEV SIGSFLVNYFSQPDIGGLTERAAAGFVSFYWGGAMAGRFIGSALLRTAAPGKLLGCAALAACALVLTTVATTGATAMWSV IAVGLFNSVMFPTIFTLGIARLGPLTGKGSSLLIMAIVGGAILPVLQGALADSIGIHTAFLMPAVCYLYIVYYGWRGSRA SEA
Sequences:
>Translated_403_residues MAGLMEHDKSKNGLALAVVTTVFFMWGFVTVLNDILVPHLKALFELNYTQTMLIQFTFFSAYFLMSTPSSRVLARVGYQR SIVIGLVVMGLGALGFVPASAARSYAIFLGALWVLASGITLLQVAANPYVAQLGPPAKGSSRLNLAQAFNSLGTTIAPYL GGMLILSETSGRADAGAVQGPYVAIAITLFLLAFGVSRFHLPALPDIEEGHGVLAGDSIWKHRHLVLGAVAIFVYVGAEV SIGSFLVNYFSQPDIGGLTERAAAGFVSFYWGGAMAGRFIGSALLRTAAPGKLLGCAALAACALVLTTVATTGATAMWSV IAVGLFNSVMFPTIFTLGIARLGPLTGKGSSLLIMAIVGGAILPVLQGALADSIGIHTAFLMPAVCYLYIVYYGWRGSRA SEA >Mature_402_residues AGLMEHDKSKNGLALAVVTTVFFMWGFVTVLNDILVPHLKALFELNYTQTMLIQFTFFSAYFLMSTPSSRVLARVGYQRS IVIGLVVMGLGALGFVPASAARSYAIFLGALWVLASGITLLQVAANPYVAQLGPPAKGSSRLNLAQAFNSLGTTIAPYLG GMLILSETSGRADAGAVQGPYVAIAITLFLLAFGVSRFHLPALPDIEEGHGVLAGDSIWKHRHLVLGAVAIFVYVGAEVS IGSFLVNYFSQPDIGGLTERAAAGFVSFYWGGAMAGRFIGSALLRTAAPGKLLGCAALAACALVLTTVATTGATAMWSVI AVGLFNSVMFPTIFTLGIARLGPLTGKGSSLLIMAIVGGAILPVLQGALADSIGIHTAFLMPAVCYLYIVYYGWRGSRAS EA
Specific function: Intake of glucose and galactose (Potential) [H]
COG id: COG0738
COG function: function code G; Fucose permease
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. FHS transporter (TC 2.A.1.7) family [H]
Homologues:
Organism=Escherichia coli, GI1789166, Length=418, Percent_Identity=34.4497607655502, Blast_Score=210, Evalue=1e-55,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005964 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 42187; Mature: 42056
Theoretical pI: Translated: 9.38; Mature: 9.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGLMEHDKSKNGLALAVVTTVFFMWGFVTVLNDILVPHLKALFELNYTQTMLIQFTFFS CCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH AYFLMSTPSSRVLARVGYQRSIVIGLVVMGLGALGFVPASAARSYAIFLGALWVLASGIT HHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCC LLQVAANPYVAQLGPPAKGSSRLNLAQAFNSLGTTIAPYLGGMLILSETSGRADAGAVQG EEEECCCCEEEECCCCCCCCCHHHHHHHHHHHCCHHHHHHCCEEEEECCCCCCCCCCCCC PYVAIAITLFLLAFGVSRFHLPALPDIEEGHGVLAGDSIWKHRHLVLGAVAIFVYVGAEV CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHCCCH SIGSFLVNYFSQPDIGGLTERAAAGFVSFYWGGAMAGRFIGSALLRTAAPGKLLGCAALA HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH ACALVLTTVATTGATAMWSVIAVGLFNSVMFPTIFTLGIARLGPLTGKGSSLLIMAIVGG HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHH AILPVLQGALADSIGIHTAFLMPAVCYLYIVYYGWRGSRASEA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure AGLMEHDKSKNGLALAVVTTVFFMWGFVTVLNDILVPHLKALFELNYTQTMLIQFTFFS CCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH AYFLMSTPSSRVLARVGYQRSIVIGLVVMGLGALGFVPASAARSYAIFLGALWVLASGIT HHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCC LLQVAANPYVAQLGPPAKGSSRLNLAQAFNSLGTTIAPYLGGMLILSETSGRADAGAVQG EEEECCCCEEEECCCCCCCCCHHHHHHHHHHHCCHHHHHHCCEEEEECCCCCCCCCCCCC PYVAIAITLFLLAFGVSRFHLPALPDIEEGHGVLAGDSIWKHRHLVLGAVAIFVYVGAEV CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHCCCH SIGSFLVNYFSQPDIGGLTERAAAGFVSFYWGGAMAGRFIGSALLRTAAPGKLLGCAALA HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH ACALVLTTVATTGATAMWSVIAVGLFNSVMFPTIFTLGIARLGPLTGKGSSLLIMAIVGG HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHH AILPVLQGALADSIGIHTAFLMPAVCYLYIVYYGWRGSRASEA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; L-fucose [Periplasm] [C]
Specific reaction: Proton [Periplasm] + L-fucose [Periplasm] = Proton [Cytoplasm] + L-fucose [Cytoplasm] [C]
General reaction: Permease [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9168605 [H]