| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116626419
Identifier: 116626419
GI number: 116626419
Start: 9263259
End: 9263951
Strand: Direct
Name: 116626419
Synonym: Acid_7381
Alternate gene names: NA
Gene position: 9263259-9263951 (Clockwise)
Preceding gene: 116626418
Following gene: 116626420
Centisome position: 92.95
GC content: 59.6
Gene sequence:
>693_bases ATGGCGAAGAAACCAAGCAAGGACAAACGCGACCCGGTCAACTATCTCGTTCTGGTCAATGTCGATAAGCACGGTAAGTT TACTTACCACCTTCCGGACGGCAGCGATGCCTCAACCCTCCGCCCATTCAACCGCGATACCGTTAAGTGGTCGCTGAAAG TCAAAGAGAAACAACAGCCCTTCTCCATCGAGTTCCCCGACTACGGCCCCTTCGGCATCCACAACCGCGTCGCCCGCTCC TTCGGAGGCCCCACCGCGGAACTCACCGTGAACGTCAGTCCGTTCTATCGCGGCAATCTCGCAATGAAGTACAACGTCAT CCTGACCAACGGTTGGTCTGACGATCCTGACGTCGTGCCGATCCCTTCCGACGGCCTGGACCCGCAGATCCAGGTGGTCA ACCCTCCGATACTGCTCAGCGTCGATGCCACCGGCCTGGTGATCTCGCCCCCGCGCAGCCCAATTTACGCGGGCATCGTC ACCTGGAAATGGCAGGACGGAGTGGACGAATCCAATCGCGACGATTTCGACCTCAAGTTCGACCCGATGGTTTCCGGATG GCCGGCGACGGCCAGCAGCAATGGGACGCAGCAAATCCTCCTCAACCTGCCCGCGGCGGGCGCTAACAATCCGTACACGA TTACTACCGAGAACCTCGGGCTGAAGGCAGCCGGCACCCTCACCGTGCTCTGA
Upstream 100 bases:
>100_bases CCGGAGGCCCGCCGCGACCCCGATTTGACTCGCTTGCGCGCCGCACCGCTCGCGTGCCAGGTACCTGCACTCTAATCCCC GGGAAAATTGGAGACGACTT
Downstream 100 bases:
>100_bases GGTTTCTCCGGCACCCAAGCACATGCGGGGCAGGCTAGGCAACGGGCGCTGGCTCTTCAACCTAAGCGGAGAAGGCCGCG AAGATTTTGGGGTAAGAGTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 230; Mature: 229
Protein sequence:
>230_residues MAKKPSKDKRDPVNYLVLVNVDKHGKFTYHLPDGSDASTLRPFNRDTVKWSLKVKEKQQPFSIEFPDYGPFGIHNRVARS FGGPTAELTVNVSPFYRGNLAMKYNVILTNGWSDDPDVVPIPSDGLDPQIQVVNPPILLSVDATGLVISPPRSPIYAGIV TWKWQDGVDESNRDDFDLKFDPMVSGWPATASSNGTQQILLNLPAAGANNPYTITTENLGLKAAGTLTVL
Sequences:
>Translated_230_residues MAKKPSKDKRDPVNYLVLVNVDKHGKFTYHLPDGSDASTLRPFNRDTVKWSLKVKEKQQPFSIEFPDYGPFGIHNRVARS FGGPTAELTVNVSPFYRGNLAMKYNVILTNGWSDDPDVVPIPSDGLDPQIQVVNPPILLSVDATGLVISPPRSPIYAGIV TWKWQDGVDESNRDDFDLKFDPMVSGWPATASSNGTQQILLNLPAAGANNPYTITTENLGLKAAGTLTVL >Mature_229_residues AKKPSKDKRDPVNYLVLVNVDKHGKFTYHLPDGSDASTLRPFNRDTVKWSLKVKEKQQPFSIEFPDYGPFGIHNRVARSF GGPTAELTVNVSPFYRGNLAMKYNVILTNGWSDDPDVVPIPSDGLDPQIQVVNPPILLSVDATGLVISPPRSPIYAGIVT WKWQDGVDESNRDDFDLKFDPMVSGWPATASSNGTQQILLNLPAAGANNPYTITTENLGLKAAGTLTVL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25208; Mature: 25077
Theoretical pI: Translated: 6.27; Mature: 6.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKKPSKDKRDPVNYLVLVNVDKHGKFTYHLPDGSDASTLRPFNRDTVKWSLKVKEKQQP CCCCCCCCCCCCCEEEEEEEECCCCCEEEECCCCCCCCCCCCCCCCEEEEEEEEECCCCC FSIEFPDYGPFGIHNRVARSFGGPTAELTVNVSPFYRGNLAMKYNVILTNGWSDDPDVVP EEEECCCCCCCCCHHHHHHHHCCCEEEEEEEECCEECCCEEEEEEEEEECCCCCCCCEEE IPSDGLDPQIQVVNPPILLSVDATGLVISPPRSPIYAGIVTWKWQDGVDESNRDDFDLKF CCCCCCCCEEEEECCCEEEEECCCEEEECCCCCCEEEEEEEEEECCCCCCCCCCCCCEEE DPMVSGWPATASSNGTQQILLNLPAAGANNPYTITTENLGLKAAGTLTVL CCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEECCCCEEECEEEEEC >Mature Secondary Structure AKKPSKDKRDPVNYLVLVNVDKHGKFTYHLPDGSDASTLRPFNRDTVKWSLKVKEKQQP CCCCCCCCCCCCEEEEEEEECCCCCEEEECCCCCCCCCCCCCCCCEEEEEEEEECCCCC FSIEFPDYGPFGIHNRVARSFGGPTAELTVNVSPFYRGNLAMKYNVILTNGWSDDPDVVP EEEECCCCCCCCCHHHHHHHHCCCEEEEEEEECCEECCCEEEEEEEEEECCCCCCCCEEE IPSDGLDPQIQVVNPPILLSVDATGLVISPPRSPIYAGIVTWKWQDGVDESNRDDFDLKF CCCCCCCCEEEEECCCEEEEECCCEEEECCCCCCEEEEEEEEEECCCCCCCCCCCCCEEE DPMVSGWPATASSNGTQQILLNLPAAGANNPYTITTENLGLKAAGTLTVL CCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEECCCCEEECEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA