| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
Click here to switch to the map view.
The map label for this gene is 116626410
Identifier: 116626410
GI number: 116626410
Start: 9250005
End: 9250964
Strand: Direct
Name: 116626410
Synonym: Acid_7372
Alternate gene names: NA
Gene position: 9250005-9250964 (Clockwise)
Preceding gene: 116626409
Following gene: 116626411
Centisome position: 92.82
GC content: 65.21
Gene sequence:
>960_bases GTGCGTTACTTCCTCATCCCCGCCCTCACCGCCTTTCTCGCCGCGCAGACCATCCGCGTGGGCGTGGACCTGGTCTCCGT GCCTGTCCTCGTCCTCTCCCGCGAGGGCCGCGTCGTACCCGACCTTCAGCCCGCCGATTTCCACCTCTTCGATAACGATG TGCCGCAAGCCTTCGTGCTCGATACTTCCGTGAGCCCGCTATCGGTAGCGATCGTCGTGCAAGCCAACCAGGATGTTCGC GCCTACCTTCCCTTCATCGCCAAAATCGGCAATGCGGTGGACGCGCTTCTGATCGGCGAAGCCGGTGAAGCCGCGGCCGT GGTCTATGGCGATGAGGTCACGGTGGCCAAACCCTTCGAATCCGGCGATCTCTCGCTCGCGCTTCGCAAGCTCGCGCCCG ATGGTCGCAACGCCCGCGCGATCGATGCCGGAATGCGCGCTATCGATCTCCTGCGCGCCCGCGCCTCCAACCACCGGCGC GTACTTCTCTACATCGGCCAGCCCGCCGACCATGGCAGCGAATCGCCCCTCGACGAACTCCGCGATGCCGCCGAGACCTA CAATGTGACCATCCACGCCGTCGCGCTCCCCGAAATCGGCAAGACCTTCGTCTCCGATACGTTCTCGCTGCAGGGACTCT CATCCCGCTCGGATCGCGGAGGCTTCAAGGCCGGCACCGATCTCGGCCGCCTCATCCCGACCGTGGCCCGTACCGCTGCC GCGGCCCAAAGCGCCGACCCGTTCTCCGTACTCGCCGCCGCCACCGGCGGCACTCAACTCCATTTCCGGGAGCAGAAACA GCTCGAAGATGCCGTCGCCATCCTGGGCATCGAGTTGCACAGCGACTACGTGCTGAGTTTTACACCCAAGGGCACCGGCT ATCACACGCTCCGCGTCGAGGTCGATGTGCCCGGCGCAAAAACGCACGCGCGCCCCGGCTATCGCCTCACCACCAATTGA
Upstream 100 bases:
>100_bases AACAGGCACGGCCGACAACATCGGCCGTGCCTTGGCCTCTACAAAATTGCCGGACCACCCCCGCTTTCGATGGCCAGACG AGACACTACACTAGCTGGTA
Downstream 100 bases:
>100_bases CGCGCGGCGTTACACTACGCCTTATGCGCAAATCGCTGATCGTTTTCATGGCCTTCGCCGCGCCCGTCTTCGCCGCCGAA ATCAAACTCTGGAACGGCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 319; Mature: 319
Protein sequence:
>319_residues MRYFLIPALTAFLAAQTIRVGVDLVSVPVLVLSREGRVVPDLQPADFHLFDNDVPQAFVLDTSVSPLSVAIVVQANQDVR AYLPFIAKIGNAVDALLIGEAGEAAAVVYGDEVTVAKPFESGDLSLALRKLAPDGRNARAIDAGMRAIDLLRARASNHRR VLLYIGQPADHGSESPLDELRDAAETYNVTIHAVALPEIGKTFVSDTFSLQGLSSRSDRGGFKAGTDLGRLIPTVARTAA AAQSADPFSVLAAATGGTQLHFREQKQLEDAVAILGIELHSDYVLSFTPKGTGYHTLRVEVDVPGAKTHARPGYRLTTN
Sequences:
>Translated_319_residues MRYFLIPALTAFLAAQTIRVGVDLVSVPVLVLSREGRVVPDLQPADFHLFDNDVPQAFVLDTSVSPLSVAIVVQANQDVR AYLPFIAKIGNAVDALLIGEAGEAAAVVYGDEVTVAKPFESGDLSLALRKLAPDGRNARAIDAGMRAIDLLRARASNHRR VLLYIGQPADHGSESPLDELRDAAETYNVTIHAVALPEIGKTFVSDTFSLQGLSSRSDRGGFKAGTDLGRLIPTVARTAA AAQSADPFSVLAAATGGTQLHFREQKQLEDAVAILGIELHSDYVLSFTPKGTGYHTLRVEVDVPGAKTHARPGYRLTTN >Mature_319_residues MRYFLIPALTAFLAAQTIRVGVDLVSVPVLVLSREGRVVPDLQPADFHLFDNDVPQAFVLDTSVSPLSVAIVVQANQDVR AYLPFIAKIGNAVDALLIGEAGEAAAVVYGDEVTVAKPFESGDLSLALRKLAPDGRNARAIDAGMRAIDLLRARASNHRR VLLYIGQPADHGSESPLDELRDAAETYNVTIHAVALPEIGKTFVSDTFSLQGLSSRSDRGGFKAGTDLGRLIPTVARTAA AAQSADPFSVLAAATGGTQLHFREQKQLEDAVAILGIELHSDYVLSFTPKGTGYHTLRVEVDVPGAKTHARPGYRLTTN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34046; Mature: 34046
Theoretical pI: Translated: 6.10; Mature: 6.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRYFLIPALTAFLAAQTIRVGVDLVSVPVLVLSREGRVVPDLQPADFHLFDNDVPQAFVL CEEEEHHHHHHHHHHHHHHHCHHHHHEEEEEEECCCCCCCCCCCCCEEEECCCCCCEEEE DTSVSPLSVAIVVQANQDVRAYLPFIAKIGNAVDALLIGEAGEAAAVVYGDEVTVAKPFE ECCCCCEEEEEEEECCCCHHHHHHHHHHHCCHHEEEEECCCCCEEEEEECCEEEEECCCC SGDLSLALRKLAPDGRNARAIDAGMRAIDLLRARASNHRRVLLYIGQPADHGSESPLDEL CCCHHHHEEHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHH RDAAETYNVTIHAVALPEIGKTFVSDTFSLQGLSSRSDRGGFKAGTDLGRLIPTVARTAA HHHHHHEEEEEEEEECCHHHHHHHCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHH AAQSADPFSVLAAATGGTQLHFREQKQLEDAVAILGIELHSDYVLSFTPKGTGYHTLRVE HHCCCCCCEEEEEECCCCEEEEHHHHHHHHEEEEEEEEECCCEEEEECCCCCCEEEEEEE VDVPGAKTHARPGYRLTTN EECCCCCCCCCCCEEEECC >Mature Secondary Structure MRYFLIPALTAFLAAQTIRVGVDLVSVPVLVLSREGRVVPDLQPADFHLFDNDVPQAFVL CEEEEHHHHHHHHHHHHHHHCHHHHHEEEEEEECCCCCCCCCCCCCEEEECCCCCCEEEE DTSVSPLSVAIVVQANQDVRAYLPFIAKIGNAVDALLIGEAGEAAAVVYGDEVTVAKPFE ECCCCCEEEEEEEECCCCHHHHHHHHHHHCCHHEEEEECCCCCEEEEEECCEEEEECCCC SGDLSLALRKLAPDGRNARAIDAGMRAIDLLRARASNHRRVLLYIGQPADHGSESPLDEL CCCHHHHEEHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHH RDAAETYNVTIHAVALPEIGKTFVSDTFSLQGLSSRSDRGGFKAGTDLGRLIPTVARTAA HHHHHHEEEEEEEEECCHHHHHHHCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHH AAQSADPFSVLAAATGGTQLHFREQKQLEDAVAILGIELHSDYVLSFTPKGTGYHTLRVE HHCCCCCCEEEEEECCCCEEEEHHHHHHHHEEEEEEEEECCCEEEEECCCCCCEEEEEEE VDVPGAKTHARPGYRLTTN EECCCCCCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA