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The map label for this gene is ytcJ [H]

Identifier: 116626407

GI number: 116626407

Start: 9245077

End: 9246750

Strand: Direct

Name: ytcJ [H]

Synonym: Acid_7369

Alternate gene names: 116626407

Gene position: 9245077-9246750 (Clockwise)

Preceding gene: 116626406

Following gene: 116626409

Centisome position: 92.77

GC content: 65.35

Gene sequence:

>1674_bases
ATGCGCGCATCCGTCTTCTTCCTGTCCGCCGCCGCCCTTCTCGCCCAACCCGCGGACCTCGTCCTCCGCAACGGCAAGAT
CGTCACCATGAATCCCGCCGCGCCCACCGCGCAGGCCATTGCGGTGCGTGGCGACAAGATCAGCGCCCTCGGCCCCGACT
CTGCCGCGCAGCGCTGGATCGGCCCCAACACCAAGGTCATCGATCTCCACGGCCAGCTCGCTATCCCCGGCTTCATCGAA
GGCCACGGACACTTCACCGGAGTCGGCGAATTCCGCATGGGCCTCGACCTCCGCGAAGCCCGCACCTGGGACGACATCGT
CGCCCAGGTCGCCCGCGCCGTCCAACAGGCCAAGCCCGGCCAGTGGATCGTCGGCCGCGGCTGGCACCAGTCCAAGTGGA
CCGTCCCGCCCACCCCCAACGTCGAAGGCTTCCCTCTCCACGCCTCTCTCGACAAAGTTTCGCCCAATAACCCCGTCGTC
CTCACCCATGCCAGCGGCCACGCCAGCTTCGTTAACGGCAAGGCCCTCGAGCTCGCCGGCGTCACCGCCCAGACCCCCAA
CCCCTCCGGCGGTGAAATCCTCAAGGACGCCAAGGGCAATCCCACCGGACTCCTCCGCGAACGCGCCTCCGGTGTCATCG
GCCCTGCCCGCGCCGCCTACGAAGCCAAGCGCACCGCCGCCGACCGCCGCGAAGAGCTCAACAAGGCCATCACGCTCGCC
ATTGACGAATCGCTCTCCAAAGGCATCACCACCTTCGAAGACGCCGGCTCGCCCTGGGCCACCATCGACGTCCTCAAGAA
GATGTCCGACGATCACCAACTCCGCATGCGCATCTGGATGATGGCCCGCGTCCCCAATGATCAGCTCGCCGCCAACATGG
ATCGCGAACGCACCATCGGCGATTACTTCACTGTCCGCGGCGTCAAGCGCGCCATCGATGGCGCCCTCGGCTCGCGCGGC
GCCTGGCTCCTCGAACCCTACACGGACAAGCCCGAAAGCAGCGGCCTCAATACCGACGATCCCGCCGACATTCGCAAAAC
CGCGGAGCTTGCGATCCAGCACAACTACCAGCTCTGCGTCCACGCCATCGGCGATCGCGCCAACCGCGAAACCCTCAACA
TCTTCGAGGAGACCTTCAAAGCCCACCCCGAGAAGAAGGACCTCCGCTGGCGCGTCGAACATGCCCAGCACCTCAACGCC
GCCGATATCCCGCGCTTCGGACAGCTCGGCGTCCTCGCCATGATGCAGGGCGTCCATTGCACCAGCGACGCACCCTACGT
CCTCCTCCGCCTGGGTGCCAAGCGCGCCGAGGAAGGCGCCTACGTCTGGCAGAAACTCATCAAATCCGGCGCCATCATCG
GCAACGGCACGGACGCTCCCGTAGAAGACGTCAGCCCCCTCGCCAGCTTCTACGCCAGCGTCAGCCGCAAGCTCAAGGAC
GGCACCGTCTTCTATCCCGACCAGCGCATGTCGCGCGAAGAGGCCCTCAAATCCTACACGCTCAATAACGCCTACGCGGC
ATTCGAAGAGAAGACCAAGGGCTCGCTCGAGGCCGGCAAATTCGCCGACATCACCGTGCTCTCCCGGGACATCATGACCA
TCCCCGAAGATCAAATCATGGCCACTGATGTCGTCTACACCATCGTCGGCGGCAAGGTCGCCTTCTCCCGGTAG

Upstream 100 bases:

>100_bases
AAATGAGCCTTTCCGGGGAGAGAAACCGAGAGCGGAGCGGTGACGCAAGACAACTCCCCGCCTGTCGCTAATTTGAGCTT
TTCCCAGTATCCTAATCTCC

Downstream 100 bases:

>100_bases
GACAGGCATCCCGGCGCCTCCCGGCTCGTCCCGTGTTGGCGACATCCGGTCTACTCGACGCCCTCACATCCGGCAGGTCT
CCGACTCGCGCTTCGCATAC

Product: amidohydrolase 3

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 557; Mature: 557

Protein sequence:

>557_residues
MRASVFFLSAAALLAQPADLVLRNGKIVTMNPAAPTAQAIAVRGDKISALGPDSAAQRWIGPNTKVIDLHGQLAIPGFIE
GHGHFTGVGEFRMGLDLREARTWDDIVAQVARAVQQAKPGQWIVGRGWHQSKWTVPPTPNVEGFPLHASLDKVSPNNPVV
LTHASGHASFVNGKALELAGVTAQTPNPSGGEILKDAKGNPTGLLRERASGVIGPARAAYEAKRTAADRREELNKAITLA
IDESLSKGITTFEDAGSPWATIDVLKKMSDDHQLRMRIWMMARVPNDQLAANMDRERTIGDYFTVRGVKRAIDGALGSRG
AWLLEPYTDKPESSGLNTDDPADIRKTAELAIQHNYQLCVHAIGDRANRETLNIFEETFKAHPEKKDLRWRVEHAQHLNA
ADIPRFGQLGVLAMMQGVHCTSDAPYVLLRLGAKRAEEGAYVWQKLIKSGAIIGNGTDAPVEDVSPLASFYASVSRKLKD
GTVFYPDQRMSREEALKSYTLNNAYAAFEEKTKGSLEAGKFADITVLSRDIMTIPEDQIMATDVVYTIVGGKVAFSR

Sequences:

>Translated_557_residues
MRASVFFLSAAALLAQPADLVLRNGKIVTMNPAAPTAQAIAVRGDKISALGPDSAAQRWIGPNTKVIDLHGQLAIPGFIE
GHGHFTGVGEFRMGLDLREARTWDDIVAQVARAVQQAKPGQWIVGRGWHQSKWTVPPTPNVEGFPLHASLDKVSPNNPVV
LTHASGHASFVNGKALELAGVTAQTPNPSGGEILKDAKGNPTGLLRERASGVIGPARAAYEAKRTAADRREELNKAITLA
IDESLSKGITTFEDAGSPWATIDVLKKMSDDHQLRMRIWMMARVPNDQLAANMDRERTIGDYFTVRGVKRAIDGALGSRG
AWLLEPYTDKPESSGLNTDDPADIRKTAELAIQHNYQLCVHAIGDRANRETLNIFEETFKAHPEKKDLRWRVEHAQHLNA
ADIPRFGQLGVLAMMQGVHCTSDAPYVLLRLGAKRAEEGAYVWQKLIKSGAIIGNGTDAPVEDVSPLASFYASVSRKLKD
GTVFYPDQRMSREEALKSYTLNNAYAAFEEKTKGSLEAGKFADITVLSRDIMTIPEDQIMATDVVYTIVGGKVAFSR
>Mature_557_residues
MRASVFFLSAAALLAQPADLVLRNGKIVTMNPAAPTAQAIAVRGDKISALGPDSAAQRWIGPNTKVIDLHGQLAIPGFIE
GHGHFTGVGEFRMGLDLREARTWDDIVAQVARAVQQAKPGQWIVGRGWHQSKWTVPPTPNVEGFPLHASLDKVSPNNPVV
LTHASGHASFVNGKALELAGVTAQTPNPSGGEILKDAKGNPTGLLRERASGVIGPARAAYEAKRTAADRREELNKAITLA
IDESLSKGITTFEDAGSPWATIDVLKKMSDDHQLRMRIWMMARVPNDQLAANMDRERTIGDYFTVRGVKRAIDGALGSRG
AWLLEPYTDKPESSGLNTDDPADIRKTAELAIQHNYQLCVHAIGDRANRETLNIFEETFKAHPEKKDLRWRVEHAQHLNA
ADIPRFGQLGVLAMMQGVHCTSDAPYVLLRLGAKRAEEGAYVWQKLIKSGAIIGNGTDAPVEDVSPLASFYASVSRKLKD
GTVFYPDQRMSREEALKSYTLNNAYAAFEEKTKGSLEAGKFADITVLSRDIMTIPEDQIMATDVVYTIVGGKVAFSR

Specific function: Unknown

COG id: COG1574

COG function: function code R; Predicted metal-dependent hydrolase with the TIM-barrel fold

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013108
- InterPro:   IPR011059 [H]

Pfam domain/function: PF07969 Amidohydro_3 [H]

EC number: NA

Molecular weight: Translated: 60669; Mature: 60669

Theoretical pI: Translated: 8.24; Mature: 8.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRASVFFLSAAALLAQPADLVLRNGKIVTMNPAAPTAQAIAVRGDKISALGPDSAAQRWI
CCCEEHHHHHHHHHHCCHHHEEECCEEEEECCCCCCCEEEEEECCEEEECCCCHHHHHHC
GPNTKVIDLHGQLAIPGFIEGHGHFTGVGEFRMGLDLREARTWDDIVAQVARAVQQAKPG
CCCCEEEEECCCEECCCEEECCCCEEEECCHHCCCCHHHHCCHHHHHHHHHHHHHHCCCC
QWIVGRGWHQSKWTVPPTPNVEGFPLHASLDKVSPNNPVVLTHASGHASFVNGKALELAG
CEEEECCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCEEEEECCCCCEECCCCEEEEEC
VTAQTPNPSGGEILKDAKGNPTGLLRERASGVIGPARAAYEAKRTAADRREELNKAITLA
CEECCCCCCCCCHHHCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEE
IDESLSKGITTFEDAGSPWATIDVLKKMSDDHQLRMRIWMMARVPNDQLAANMDRERTIG
EHHHHHCCCCCHHCCCCCHHHHHHHHHCCCCHHEEEEEEEEEECCCHHHHHCCCCHHCCC
DYFTVRGVKRAIDGALGSRGAWLLEPYTDKPESSGLNTDDPADIRKTAELAIQHNYQLCV
HHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEE
HAIGDRANRETLNIFEETFKAHPEKKDLRWRVEHAQHLNAADIPRFGQLGVLAMMQGVHC
EECCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCC
TSDAPYVLLRLGAKRAEEGAYVWQKLIKSGAIIGNGTDAPVEDVSPLASFYASVSRKLKD
CCCCCEEEEEECCHHCCCHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHHHHHHCC
GTVFYPDQRMSREEALKSYTLNNAYAAFEEKTKGSLEAGKFADITVLSRDIMTIPEDQIM
CEEECCCHHCCHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCEEEEEECCCHHCCCCCHHH
ATDVVYTIVGGKVAFSR
HHHHEEEEECCEEECCC
>Mature Secondary Structure
MRASVFFLSAAALLAQPADLVLRNGKIVTMNPAAPTAQAIAVRGDKISALGPDSAAQRWI
CCCEEHHHHHHHHHHCCHHHEEECCEEEEECCCCCCCEEEEEECCEEEECCCCHHHHHHC
GPNTKVIDLHGQLAIPGFIEGHGHFTGVGEFRMGLDLREARTWDDIVAQVARAVQQAKPG
CCCCEEEEECCCEECCCEEECCCCEEEECCHHCCCCHHHHCCHHHHHHHHHHHHHHCCCC
QWIVGRGWHQSKWTVPPTPNVEGFPLHASLDKVSPNNPVVLTHASGHASFVNGKALELAG
CEEEECCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCEEEEECCCCCEECCCCEEEEEC
VTAQTPNPSGGEILKDAKGNPTGLLRERASGVIGPARAAYEAKRTAADRREELNKAITLA
CEECCCCCCCCCHHHCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEE
IDESLSKGITTFEDAGSPWATIDVLKKMSDDHQLRMRIWMMARVPNDQLAANMDRERTIG
EHHHHHCCCCCHHCCCCCHHHHHHHHHCCCCHHEEEEEEEEEECCCHHHHHCCCCHHCCC
DYFTVRGVKRAIDGALGSRGAWLLEPYTDKPESSGLNTDDPADIRKTAELAIQHNYQLCV
HHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEE
HAIGDRANRETLNIFEETFKAHPEKKDLRWRVEHAQHLNAADIPRFGQLGVLAMMQGVHC
EECCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCC
TSDAPYVLLRLGAKRAEEGAYVWQKLIKSGAIIGNGTDAPVEDVSPLASFYASVSRKLKD
CCCCCEEEEEECCHHCCCHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHHHHHHCC
GTVFYPDQRMSREEALKSYTLNNAYAAFEEKTKGSLEAGKFADITVLSRDIMTIPEDQIM
CEEECCCHHCCHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCEEEEEECCCHHCCCCCHHH
ATDVVYTIVGGKVAFSR
HHHHEEEEECCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]