| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116626367
Identifier: 116626367
GI number: 116626367
Start: 9199644
End: 9201314
Strand: Direct
Name: 116626367
Synonym: Acid_7327
Alternate gene names: NA
Gene position: 9199644-9201314 (Clockwise)
Preceding gene: 116626366
Following gene: 116626368
Centisome position: 92.31
GC content: 65.65
Gene sequence:
>1671_bases TTGCTCCTTCTTCCCGCGTTGATCGCTTCGGGGCAGCCTTCCTTCCGCGCTGATCGCGTGCTGCCCTCCGGCTCCGCGCG TCAGGCGCCGCTCGCACCCGGGATGTTGGTCTCCATCTATGGTGATCATCTCGGCCCCACAACCCAGTGCAGCGCGACTG ACCGCCCGATCTATCCCACCGAGCTTTGCGGCGTCCAGGTCTTCCTCGCAGGCAAACCGGCCGGATTGCTCTATGTTTCG GAAAATCAGATCAACTTCAAAGTGCCGCAGGATGTGCCGCTCACCGGCGATTCCGAGTTGAAGGTGCTCCACCAGCAGCA GACCGGCACCGCCCAGGTGCGCGTCGGCCTGGAATCTACTTCGCTCTCCGTCGAAGGCGAAGCGCGCGTGGGCGCGCCAG TGTGGATTCACATCGCGACACCATTCGGATGGAACTCCGTCGTGCAATACCCCGTCTCCGCAAGGCCAAACGACTTCGGA TGCAACGACATCGAGGTGCGCCGCAATGGCGTCCTGCTCCCGAGCATCGATTTGCGCCCCCCGGCCGGCGGAATCGCGAT GGGCGGACCACTCTGCGGGAATATCGGCATCGAGGGCGGACCGCTCCACACCGGCCGTCTGCCGCTCCATCTGCTATATC ATTTCACTGAACCCGGAGTGTACGAGGTTCGCTATACGCGCCGGGGAATGGATCCACGCGATCCCTCCAAGTTCCAACTG CAATCGGAGTGGAGTCCCATCCACGTCCTTCCCCGCGCTCCCGGCCCGCGCGCCGCACAGGCCGCCCCCGCGGCTGCCCC GGAACTCCTCAGCGATTACCTGCCCAGCCTGCTCAGCTTCGCCGATGCCACCGCGCTCGACGCCGTGGTCGCTTGCCTCT ACCACCCGAACTACTCCGTCCGCACATATGCTTCTGCAGCGCTTGCCTACTGGCCTCAGGCCGAAGCCGACGCGCGCGTC GATCGCGAGCTTCCCGCGCGCGGCCCCAGCGATATGACCGTCGAAGGCACGCTGCAGCGTCATCCCGAAATGCTCGCGCT CGTGCTGCCCTACTTGAAGTCGAATGACCCGACGCTGCTTCGCGGCGTTCTAACCGGCGTCTCGCGCTGGATCTATGCCC ATCCCGCGGACGTGCAGGCGGAGACCGCGCTGATCGCCGCAGCCGAACACGTGATCGCCTCCAGCGACGAACAGACCGTC GTCAACTACGCCGCCGCGCTCGGCACGGTACGCGATCCGCGCGCCGGCGCCCTGCTCTGGAATCTGGTGCAACGCAACGT CGCCCGCGAACAGGCGCTGATCGCGATCAGTTGGCGCAAAGACCCGCGCGACCTGCCGCGCCTGGCCGCCCTGCTCGAAT CGCCCGCCGCCGGCGACCCCCTCTCCTACAAGCTCGCCAGCCTGCCATATGCACTGCGCAATTCCTTCGGTGACGCCGCA TTGCCGTATCTCGAGTCCGCGCTCAAGAATTCGGAATTCGTCTGGGTGCGAACCAACGCCGCGCGCGAACTCATCCTCGC GGGCCGTCCTTCCGGCTTCGCCTTCGTCGCCCAAGCCATCGAGCAGAAGACCCGCTACGTACGCGAAATGGTACAGTTCG TGCAAGACCGCTTCCCGGAATTACGCGGCCGCGACGACGACGCCGTCCTCGCCTTCCTCCGCGCCCGCTGA
Upstream 100 bases:
>100_bases AGTCCAGAGCCGCCTTTCAGGCGGCTTCTGCGGAGACCGCCGCGCTTTTCCAAGGAGTGCCCCCTCCTGTCTCGTCCTAT GATGAGGTATGCGGCTCTGG
Downstream 100 bases:
>100_bases GTTTACTACCGCCCTCGCTCCGCCGTTATAGAATACCCTCCATGCCGTCCAGCGATCCGATTCGCCACGTTATTCTCCTC ATCATGGAGAACCGTTCTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 556; Mature: 556
Protein sequence:
>556_residues MLLLPALIASGQPSFRADRVLPSGSARQAPLAPGMLVSIYGDHLGPTTQCSATDRPIYPTELCGVQVFLAGKPAGLLYVS ENQINFKVPQDVPLTGDSELKVLHQQQTGTAQVRVGLESTSLSVEGEARVGAPVWIHIATPFGWNSVVQYPVSARPNDFG CNDIEVRRNGVLLPSIDLRPPAGGIAMGGPLCGNIGIEGGPLHTGRLPLHLLYHFTEPGVYEVRYTRRGMDPRDPSKFQL QSEWSPIHVLPRAPGPRAAQAAPAAAPELLSDYLPSLLSFADATALDAVVACLYHPNYSVRTYASAALAYWPQAEADARV DRELPARGPSDMTVEGTLQRHPEMLALVLPYLKSNDPTLLRGVLTGVSRWIYAHPADVQAETALIAAAEHVIASSDEQTV VNYAAALGTVRDPRAGALLWNLVQRNVAREQALIAISWRKDPRDLPRLAALLESPAAGDPLSYKLASLPYALRNSFGDAA LPYLESALKNSEFVWVRTNAARELILAGRPSGFAFVAQAIEQKTRYVREMVQFVQDRFPELRGRDDDAVLAFLRAR
Sequences:
>Translated_556_residues MLLLPALIASGQPSFRADRVLPSGSARQAPLAPGMLVSIYGDHLGPTTQCSATDRPIYPTELCGVQVFLAGKPAGLLYVS ENQINFKVPQDVPLTGDSELKVLHQQQTGTAQVRVGLESTSLSVEGEARVGAPVWIHIATPFGWNSVVQYPVSARPNDFG CNDIEVRRNGVLLPSIDLRPPAGGIAMGGPLCGNIGIEGGPLHTGRLPLHLLYHFTEPGVYEVRYTRRGMDPRDPSKFQL QSEWSPIHVLPRAPGPRAAQAAPAAAPELLSDYLPSLLSFADATALDAVVACLYHPNYSVRTYASAALAYWPQAEADARV DRELPARGPSDMTVEGTLQRHPEMLALVLPYLKSNDPTLLRGVLTGVSRWIYAHPADVQAETALIAAAEHVIASSDEQTV VNYAAALGTVRDPRAGALLWNLVQRNVAREQALIAISWRKDPRDLPRLAALLESPAAGDPLSYKLASLPYALRNSFGDAA LPYLESALKNSEFVWVRTNAARELILAGRPSGFAFVAQAIEQKTRYVREMVQFVQDRFPELRGRDDDAVLAFLRAR >Mature_556_residues MLLLPALIASGQPSFRADRVLPSGSARQAPLAPGMLVSIYGDHLGPTTQCSATDRPIYPTELCGVQVFLAGKPAGLLYVS ENQINFKVPQDVPLTGDSELKVLHQQQTGTAQVRVGLESTSLSVEGEARVGAPVWIHIATPFGWNSVVQYPVSARPNDFG CNDIEVRRNGVLLPSIDLRPPAGGIAMGGPLCGNIGIEGGPLHTGRLPLHLLYHFTEPGVYEVRYTRRGMDPRDPSKFQL QSEWSPIHVLPRAPGPRAAQAAPAAAPELLSDYLPSLLSFADATALDAVVACLYHPNYSVRTYASAALAYWPQAEADARV DRELPARGPSDMTVEGTLQRHPEMLALVLPYLKSNDPTLLRGVLTGVSRWIYAHPADVQAETALIAAAEHVIASSDEQTV VNYAAALGTVRDPRAGALLWNLVQRNVAREQALIAISWRKDPRDLPRLAALLESPAAGDPLSYKLASLPYALRNSFGDAA LPYLESALKNSEFVWVRTNAARELILAGRPSGFAFVAQAIEQKTRYVREMVQFVQDRFPELRGRDDDAVLAFLRAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 60339; Mature: 60339
Theoretical pI: Translated: 6.74; Mature: 6.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLLPALIASGQPSFRADRVLPSGSARQAPLAPGMLVSIYGDHLGPTTQCSATDRPIYPT CEEECCHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCH ELCGVQVFLAGKPAGLLYVSENQINFKVPQDVPLTGDSELKVLHQQQTGTAQVRVGLEST HHCCEEEEEECCCCEEEEEECCEEEEECCCCCCCCCCCHHHEEECCCCCCEEEEEEEECC SLSVEGEARVGAPVWIHIATPFGWNSVVQYPVSARPNDFGCNDIEVRRNGVLLPSIDLRP EEEECCCCCCCCEEEEEEECCCCCCHHEECCCCCCCCCCCCCCEEEECCCEEECCCCCCC PAGGIAMGGPLCGNIGIEGGPLHTGRLPLHLLYHFTEPGVYEVRYTRRGMDPRDPSKFQL CCCCEECCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCEEE QSEWSPIHVLPRAPGPRAAQAAPAAAPELLSDYLPSLLSFADATALDAVVACLYHPNYSV ECCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC RTYASAALAYWPQAEADARVDRELPARGPSDMTVEGTLQRHPEMLALVLPYLKSNDPTLL HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEECHHHHCHHHHHHHHHHHCCCCCHHH RGVLTGVSRWIYAHPADVQAETALIAAAEHVIASSDEQTVVNYAAALGTVRDPRAGALLW HHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHHH NLVQRNVAREQALIAISWRKDPRDLPRLAALLESPAAGDPLSYKLASLPYALRNSFGDAA HHHHHHHHHHCEEEEEEECCCCHHHHHHHHHHCCCCCCCCCCHHHHHCCHHHHHCCCCHH LPYLESALKNSEFVWVRTNAARELILAGRPSGFAFVAQAIEQKTRYVREMVQFVQDRFPE HHHHHHHHCCCCEEEEEECCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHH LRGRDDDAVLAFLRAR HCCCCCHHHHHEECCC >Mature Secondary Structure MLLLPALIASGQPSFRADRVLPSGSARQAPLAPGMLVSIYGDHLGPTTQCSATDRPIYPT CEEECCHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCH ELCGVQVFLAGKPAGLLYVSENQINFKVPQDVPLTGDSELKVLHQQQTGTAQVRVGLEST HHCCEEEEEECCCCEEEEEECCEEEEECCCCCCCCCCCHHHEEECCCCCCEEEEEEEECC SLSVEGEARVGAPVWIHIATPFGWNSVVQYPVSARPNDFGCNDIEVRRNGVLLPSIDLRP EEEECCCCCCCCEEEEEEECCCCCCHHEECCCCCCCCCCCCCCEEEECCCEEECCCCCCC PAGGIAMGGPLCGNIGIEGGPLHTGRLPLHLLYHFTEPGVYEVRYTRRGMDPRDPSKFQL CCCCEECCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCEEE QSEWSPIHVLPRAPGPRAAQAAPAAAPELLSDYLPSLLSFADATALDAVVACLYHPNYSV ECCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC RTYASAALAYWPQAEADARVDRELPARGPSDMTVEGTLQRHPEMLALVLPYLKSNDPTLL HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEECHHHHCHHHHHHHHHHHCCCCCHHH RGVLTGVSRWIYAHPADVQAETALIAAAEHVIASSDEQTVVNYAAALGTVRDPRAGALLW HHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHHH NLVQRNVAREQALIAISWRKDPRDLPRLAALLESPAAGDPLSYKLASLPYALRNSFGDAA HHHHHHHHHHCEEEEEEECCCCHHHHHHHHHHCCCCCCCCCCHHHHHCCHHHHHCCCCHH LPYLESALKNSEFVWVRTNAARELILAGRPSGFAFVAQAIEQKTRYVREMVQFVQDRFPE HHHHHHHHCCCCEEEEEECCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHH LRGRDDDAVLAFLRAR HCCCCCHHHHHEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA