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The map label for this gene is infA

Identifier: 116626279

GI number: 116626279

Start: 9089650

End: 9089868

Strand: Direct

Name: infA

Synonym: Acid_7239

Alternate gene names: 116626279

Gene position: 9089650-9089868 (Clockwise)

Preceding gene: 116626278

Following gene: 116626280

Centisome position: 91.21

GC content: 56.62

Gene sequence:

>219_bases
ATGAGCAAAGAGGACAGCATTGAAGTAACCGGCACGGTCTTGGAAAAGTTCCCGAGCGGGCTGTTTAGCGTGCAGCTGGA
ACACGAGCGAGTGGTTCTGGCTCACTTGGCGGGAAGGTTGCGGCGGAACCGCATCCGCGTTTTGGCGGGCGACAAAGTCA
CTCTGGAACTGTCACCCTATGATCTGACCAAGGGCCGTATCACTTTCCGGCACAGATAG

Upstream 100 bases:

>100_bases
GCAGGCGACCAACGTTACGGCGGCCTAATTTAAGTCGCGGGCCGGTTCAGGTACTGTTCGGTACTGGATCCGGCCCGCCC
ATTTCACTATTTGGAGGTCT

Downstream 100 bases:

>100_bases
GGTTTTCCCTTCTGCGCCGCCCCACCGAAAATTTCCTCAAACAAGTACTATTTCGTATGAACCCGGACAGGCGTACCCTG
CATCGGCATGTTACATGTGT

Product: translation initiation factor 1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 72; Mature: 71

Protein sequence:

>72_residues
MSKEDSIEVTGTVLEKFPSGLFSVQLEHERVVLAHLAGRLRRNRIRVLAGDKVTLELSPYDLTKGRITFRHR

Sequences:

>Translated_72_residues
MSKEDSIEVTGTVLEKFPSGLFSVQLEHERVVLAHLAGRLRRNRIRVLAGDKVTLELSPYDLTKGRITFRHR
>Mature_71_residues
SKEDSIEVTGTVLEKFPSGLFSVQLEHERVVLAHLAGRLRRNRIRVLAGDKVTLELSPYDLTKGRITFRHR

Specific function: No specific function has so far been attributed to this initiation factor; however, it seems to stimulate more or less all the activities of the other two initiation factors, IF-2 and IF-3

COG id: COG0361

COG function: function code J; Translation initiation factor 1 (IF-1)

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S1-like domain

Homologues:

Organism=Escherichia coli, GI1787110, Length=72, Percent_Identity=61.1111111111111, Blast_Score=100, Evalue=3e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): IF1_SOLUE (Q01QC0)

Other databases:

- EMBL:   CP000473
- RefSeq:   YP_828435.1
- ProteinModelPortal:   Q01QC0
- SMR:   Q01QC0
- STRING:   Q01QC0
- GeneID:   4424750
- GenomeReviews:   CP000473_GR
- KEGG:   sus:Acid_7239
- NMPDR:   fig|234267.9.peg.6866
- eggNOG:   COG0361
- HOGENOM:   HBG286099
- OMA:   VQLDAGH
- GO:   GO:0005737
- HAMAP:   MF_00075
- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR022967
- InterPro:   IPR006196
- InterPro:   IPR004368
- Gene3D:   G3DSA:2.40.50.140
- SMART:   SM00316
- TIGRFAMs:   TIGR00008

Pfam domain/function: PF01176 eIF-1a; SSF50249 Nucleic_acid_OB

EC number: NA

Molecular weight: Translated: 8245; Mature: 8114

Theoretical pI: Translated: 10.80; Mature: 10.80

Prosite motif: PS50832 S1_IF1_TYPE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKEDSIEVTGTVLEKFPSGLFSVQLEHERVVLAHLAGRLRRNRIRVLAGDKVTLELSPY
CCCCCCEEEHHHHHHHCCCCEEEEEECCCEEEEHHHHHHHCCCEEEEEECCEEEEEECCC
DLTKGRITFRHR
CCCCCEEEEECC
>Mature Secondary Structure 
SKEDSIEVTGTVLEKFPSGLFSVQLEHERVVLAHLAGRLRRNRIRVLAGDKVTLELSPY
CCCCCEEEHHHHHHHCCCCEEEEEECCCEEEEHHHHHHHCCCEEEEEECCEEEEEECCC
DLTKGRITFRHR
CCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA