Click here to switch to the map view.

The map label for this gene is 116626260

Identifier: 116626260

GI number: 116626260

Start: 9070966

End: 9072147

Strand: Direct

Name: 116626260

Synonym: Acid_7220

Alternate gene names: NA

Gene position: 9070966-9072147 (Clockwise)

Preceding gene: 116626259

Following gene: 116626264

Centisome position: 91.02

GC content: 59.98

Gene sequence:

>1182_bases
TTGAGGGGAAGCCTGCTGTTCCTGTTTGCGGCAAGCTGTGCGTTTGGGCAGACGAGTGATTCCTACGCCGGCTCGGCCGC
CTGCAAAACCTGTCATCCAAGTATTTATGAGCGCTGGAGCAAAACGCGGATGGCGAACGTCGTCCGCGATCCTAAAGTCC
ACCCGGACGCGATCATTCCCGATCTCTCCAAACCCGATCCGCTCGTGAAGTTCACGAAGGAAGAGATCGCCTTCGTCTAC
GGCAGCAAGTGGAAGCAGCGCTATTTCACCAAAAAGGGCGACGATTACTATCCTCTCGGCGCGCAGTGGGACGTCACGCA
CCAGATGTGGCGCCCGTACATGGTTGCGGCGAACACCGATTGGTGGGTTCCGCATTATCCCGCGGACAACATGCAGCGGC
CCACGGGACCGCTGTGCGACGGCTGCCACTCGGTCAACTATAACGTGCAAACCAAGACCGTGACCGAATGGAATGTCGGC
TGCGAAAAGTGTCATGGACCGGGCGCGGCCCACGCGCGGAAGCCGTCGCAGACGAATGTGGTCAACCCAGCTCGGCTGGA
TACGGTGCAGGCGACCAATGTCTGCCTGCAGTGCCATTCGCAGGGACAGCCGGTGGAGAACCCGATCGCCGGCAAGTATT
ACGACTGGCCGGTAGGTTTCGAAGTCGGCAAGGATCTGAAAAACTACTGGAAGCTGGAAGAGCACAAGCTCGGCGAGCAG
AGCTTCACTCACTTCGCCGAAGGGACGGCGCACAAGAATCGGATGCAGGGCAATGATTTCGTGCAGAGCGTGATGTACAC
CCACGGTATCAGCTGCCAGAGTTGCCACGATGTCCATGGAACCGCGAACAATGCCGACCTGCTGAAGCCGGCGAACGTAC
TCTGCCTCGGATGCCATGGGCCAAACTCGCCCAACGGACCGCGTGCGACGACGGTCGAAGCGCACACGCACCATAAGGCC
GGCAGCGTGGGCAATGAGTGCGTCAGCTGTCACATGCCGAAGATCGAGCAAACGATCGCCGACGTCAACGTCCGCAGTCA
TACCTTCCGCTTCGTTACCCCGCGCGAAACGGCCGCGCTCAAGGTCCCGAACGCTTGCAACGCCTGCCACACCGACAAAT
CGACGCAATGGTCCAGCGACGCGCTCAAGACGTGGTCCAACGTCTCTCCGTGGCGGAACTGA

Upstream 100 bases:

>100_bases
GGATCGCGCCGGCGATCGGTAACGCGATCTTCGACGCGAACGGGAAGCGCATCCGGCGATTGCCGTTGATGGCGTAAACT
AAGCACATCGAGGTAAATAA

Downstream 100 bases:

>100_bases
CCGCTACACCACGCGCTTGATCTGGCCCCCGAGTCCGAACAGCACAGCGGTCCCCACCAGCGGCAGAAGTCCCGCGATGA
TCAGCATGGGCGTGTACGAG

Product: cytochrome C family protein

Products: NA

Alternate protein names: Cytochrome C Family Protein; Tetratricopeptide TPR_2 Repeat Protein; TPR Domain-Containing Protein; Tetratricopeptide Repeat Domain Protein; C-Type Cytochrome; TPR Domain Protein; Tetratricopeptide Domain-Containing Protein; Doubled CXXCH Domain Protein; FOG TPR Repeat; Signal Peptide; Tetratricopeptide Repeat-Containing Protein; Doubled CXXCH Domain-Containing Protein; Deca-Heme C-Type Cytochrome; Cytochrome C

Number of amino acids: Translated: 393; Mature: 393

Protein sequence:

>393_residues
MRGSLLFLFAASCAFGQTSDSYAGSAACKTCHPSIYERWSKTRMANVVRDPKVHPDAIIPDLSKPDPLVKFTKEEIAFVY
GSKWKQRYFTKKGDDYYPLGAQWDVTHQMWRPYMVAANTDWWVPHYPADNMQRPTGPLCDGCHSVNYNVQTKTVTEWNVG
CEKCHGPGAAHARKPSQTNVVNPARLDTVQATNVCLQCHSQGQPVENPIAGKYYDWPVGFEVGKDLKNYWKLEEHKLGEQ
SFTHFAEGTAHKNRMQGNDFVQSVMYTHGISCQSCHDVHGTANNADLLKPANVLCLGCHGPNSPNGPRATTVEAHTHHKA
GSVGNECVSCHMPKIEQTIADVNVRSHTFRFVTPRETAALKVPNACNACHTDKSTQWSSDALKTWSNVSPWRN

Sequences:

>Translated_393_residues
MRGSLLFLFAASCAFGQTSDSYAGSAACKTCHPSIYERWSKTRMANVVRDPKVHPDAIIPDLSKPDPLVKFTKEEIAFVY
GSKWKQRYFTKKGDDYYPLGAQWDVTHQMWRPYMVAANTDWWVPHYPADNMQRPTGPLCDGCHSVNYNVQTKTVTEWNVG
CEKCHGPGAAHARKPSQTNVVNPARLDTVQATNVCLQCHSQGQPVENPIAGKYYDWPVGFEVGKDLKNYWKLEEHKLGEQ
SFTHFAEGTAHKNRMQGNDFVQSVMYTHGISCQSCHDVHGTANNADLLKPANVLCLGCHGPNSPNGPRATTVEAHTHHKA
GSVGNECVSCHMPKIEQTIADVNVRSHTFRFVTPRETAALKVPNACNACHTDKSTQWSSDALKTWSNVSPWRN
>Mature_393_residues
MRGSLLFLFAASCAFGQTSDSYAGSAACKTCHPSIYERWSKTRMANVVRDPKVHPDAIIPDLSKPDPLVKFTKEEIAFVY
GSKWKQRYFTKKGDDYYPLGAQWDVTHQMWRPYMVAANTDWWVPHYPADNMQRPTGPLCDGCHSVNYNVQTKTVTEWNVG
CEKCHGPGAAHARKPSQTNVVNPARLDTVQATNVCLQCHSQGQPVENPIAGKYYDWPVGFEVGKDLKNYWKLEEHKLGEQ
SFTHFAEGTAHKNRMQGNDFVQSVMYTHGISCQSCHDVHGTANNADLLKPANVLCLGCHGPNSPNGPRATTVEAHTHHKA
GSVGNECVSCHMPKIEQTIADVNVRSHTFRFVTPRETAALKVPNACNACHTDKSTQWSSDALKTWSNVSPWRN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43846; Mature: 43846

Theoretical pI: Translated: 8.13; Mature: 8.13

Prosite motif: PS51008 MULTIHEME_CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
4.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGSLLFLFAASCAFGQTSDSYAGSAACKTCHPSIYERWSKTRMANVVRDPKVHPDAIIP
CCCCEEEEEEHHHHCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCC
DLSKPDPLVKFTKEEIAFVYGSKWKQRYFTKKGDDYYPLGAQWDVTHQMWRPYMVAANTD
CCCCCCHHHHCCHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCEEEEECCC
WWVPHYPADNMQRPTGPLCDGCHSVNYNVQTKTVTEWNVGCEKCHGPGAAHARKPSQTNV
CCCCCCCCCCCCCCCCCHHCCCCCCCCEEEEEEEEECCCCHHHCCCCCCCCCCCCCCCCC
VNPARLDTVQATNVCLQCHSQGQPVENPIAGKYYDWPVGFEVGKDLKNYWKLEEHKLGEQ
CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHCCHH
SFTHFAEGTAHKNRMQGNDFVQSVMYTHGISCQSCHDVHGTANNADLLKPANVLCLGCHG
HHHHHHCCCCHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCC
PNSPNGPRATTVEAHTHHKAGSVGNECVSCHMPKIEQTIADVNVRSHTFRFVTPRETAAL
CCCCCCCCEEEEECCCCCCCCCCCCHHHCCCCCHHHHHHHHCCCCCCEEEEECCCCCCEE
KVPNACNACHTDKSTQWSSDALKTWSNVSPWRN
ECCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCC
>Mature Secondary Structure
MRGSLLFLFAASCAFGQTSDSYAGSAACKTCHPSIYERWSKTRMANVVRDPKVHPDAIIP
CCCCEEEEEEHHHHCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCC
DLSKPDPLVKFTKEEIAFVYGSKWKQRYFTKKGDDYYPLGAQWDVTHQMWRPYMVAANTD
CCCCCCHHHHCCHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCEEEEECCC
WWVPHYPADNMQRPTGPLCDGCHSVNYNVQTKTVTEWNVGCEKCHGPGAAHARKPSQTNV
CCCCCCCCCCCCCCCCCHHCCCCCCCCEEEEEEEEECCCCHHHCCCCCCCCCCCCCCCCC
VNPARLDTVQATNVCLQCHSQGQPVENPIAGKYYDWPVGFEVGKDLKNYWKLEEHKLGEQ
CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHCCHH
SFTHFAEGTAHKNRMQGNDFVQSVMYTHGISCQSCHDVHGTANNADLLKPANVLCLGCHG
HHHHHHCCCCHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCC
PNSPNGPRATTVEAHTHHKAGSVGNECVSCHMPKIEQTIADVNVRSHTFRFVTPRETAAL
CCCCCCCCEEEEECCCCCCCCCCCCHHHCCCCCHHHHHHHHCCCCCCEEEEECCCCCCEE
KVPNACNACHTDKSTQWSSDALKTWSNVSPWRN
ECCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA