| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116626225
Identifier: 116626225
GI number: 116626225
Start: 9024128
End: 9026293
Strand: Direct
Name: 116626225
Synonym: Acid_7185
Alternate gene names: NA
Gene position: 9024128-9026293 (Clockwise)
Preceding gene: 116626224
Following gene: 116626226
Centisome position: 90.55
GC content: 64.59
Gene sequence:
>2166_bases ATGAAAATACTCTCTTTGCTGCTGGCGGCAACCAGTCTGTTCGCCGGCCAGACTCGCACCTGGACGCAGGGCGACTCGGC CGATTTTGAAAAAGGCATTTTGAAGAATCTCTCCCTGCGCAGCGATGGGCGCCTTTCACTGGCGCCGGTCTCGCGCGAGT TGTTCGACACGGCATCCTCTTACCTGTGGGCGCTCGCCCAGGATTCCAAGGGCACCCTCTACGCGGGCGGCGGCACCAGC GCGAAGCTCTATCGCATACCGCTCGATGGGAAAGGCAAGGTGGTGGCGGACCTGGATGCGCTCGAGATCCATGCCATTGC GATCGATTCGAAAGATCGTGTCTACGCCGCCACATCGCCCGACGGCAAGATCTACCGCATCACGGGCAACGGCAAGCCGG AGGTTTTCTACGATCCCAAGGCGAAGTACATCTGGGCGCTGGCGTTCGATGCCGCCGGCAATCTCTTCGTGGCCACCGGC GATCAGGGCGAGATCCATCGTGTGACGCCCGACGGCAAGGGCAGGATCTTCTTCAAGACCGAGGAGACGCACGTTCGCTC GATGACGATCGACGGCAAGGGCAACCTGATCGCCGGTACGGAACCGGGCGGCCTGGTGCTGCGCGTCTCGCCAGCGGGCG ACGGCTTCGTGCTTTACCAGATGGCGAAGAAGGAAGTGACCGCGGTGGCGGTGGCGCCCGATGGCGCGATTTATGCAGCC GCCGTCGGCAACCGGCAGAGCAGTCCTCCAACGACCCCTGCTCCGCCGCCCGTGCCGGCACAGGTGCAAGTGACGACCGG ACCCGGCGCAGCACAGCCGCCTCGCCAGCCCTCGCCGCCGGTGGCTTCGCTCACACCGACGGGTGTCGCGGGCGGCAGCG AACTCTATCGCATCGATCCCGATGGCGTGCCGCGGCGCGTCTGGAGTCACGCGACGGACGTGGTCTACGCGATCGCATTC GACGCGGGCGGCCGGGCACTACTCGCGGCCGGAAACAGGGGCAACCTATACCGCGTGGAATCTCCCACGCTCTACACAGG ACTCCTGGTGATGCCGGCGACCCAGGTAACGGCACTGCAGATGGGGGCCGGAGGACGGCTCTACGCGGCCACAGGCAATG CGGGTAAAGTCTTTGAGGTCGGGCCGGCGCTCGAGAGCACGGGCTCCGTGGAAAGCGACGTCTTCGATTCCGGCAGCTAC TCGCTGTGGGGCCGGGTCACTCCGGAGGTCATGCTGAACGGTGGGCAACTCACGCTGGCCACGCGCAGCGGCAACCTGGA TCAGCCGCAGAAAAACTGGAGTGCGTGGACGCCGGTCGCGGCCGGTCCTAAGGGCGGACGCTCGGCCTCACCGGCGGCTC GCTTCGTGCAGTGGAAGGCGACGTTCACCGGGGCCGAAGGGCGATCGCCCGAATTGGACTCCGTGGACCTGGCGTACCTA CCCAAGAATCTCGAGCCGCGCATCGATGAAATCGAAACGACGCCGCCGAACTATCGCTTCCCGGCGTCTTCGGTCTCGGC GCTTTCGGTGATCCAATCGACGCTTTCGCTGCCGCCTCTCGGCAAACACTCCACTACCAGCGGCGGCCCGCAATTGACGC TCGATACCACGCCCGCGATGCAGTCCGCCAAGGGCTTCCTGGGAGCGCGCTGGTCGGCGCTGGACCCGAATGGCGATCCG CTGGTATTCACCGTGGAGATCCGCGGCGTCAAAGAGGCCGAGTGGAAGCTGCTCAAGGACAAGGTCAACGAGAAGTATCT CTCGTGGGATTCCACGGCCTTTCCGGATGGCGAGTACAGAATTCGCGTCACCGCATCGGACGCTCCCGGCAATCCGTCGG CGGAGGTGCTGACCGCGCGCCTGGAAAGCAGCCCGTTCTGGATCGACAACACACCGCCGAAGATTACCGGGCTCGCGGGC GTGCGCATCGGGAGTAAGCTGCAGCTGAAATGGCATGCCGCCGATGCGCTGAACAATATCGCCAAAGCCGAGTATTCCGT CGATGGCGGAGATTGGAAGATCGCGCCGCCGGTCACGCGCCTGTCCGACAGTCAGGAACTCGATTACGAACTCGCCTTGG ATGCCGGGCCCGGCGAACACACGGTCGCGGTGCGCGTTGAGGACGATTACGCGAACCAGGCGGTGGAGAAAGTAGTGGTC CACTAG
Upstream 100 bases:
>100_bases ACCGCTCCATGGTGACCACGCCGGAGACCGCGTCCGAGCAGATGTCCATCCCGTTCGACTATATGGTGACCGGCAGTTAT TCCCTGCGAATTCACGTCAA
Downstream 100 bases:
>100_bases GGAAGAGAGTAAGCTGGTGCTTGGTCTCAGTCGAAGAATACCTGAACACCGCGTACGATCCCGATCTGGAGTTCGTGGAC GGCGTCCTTGTGGAGCGCAA
Product: YD repeat-containing protein
Products: NA
Alternate protein names: YD Repeat-Containing Protein; Pyrrolo-Quinoline Quinone Beta-Propeller Repeat Protein; Secreted Protein
Number of amino acids: Translated: 721; Mature: 721
Protein sequence:
>721_residues MKILSLLLAATSLFAGQTRTWTQGDSADFEKGILKNLSLRSDGRLSLAPVSRELFDTASSYLWALAQDSKGTLYAGGGTS AKLYRIPLDGKGKVVADLDALEIHAIAIDSKDRVYAATSPDGKIYRITGNGKPEVFYDPKAKYIWALAFDAAGNLFVATG DQGEIHRVTPDGKGRIFFKTEETHVRSMTIDGKGNLIAGTEPGGLVLRVSPAGDGFVLYQMAKKEVTAVAVAPDGAIYAA AVGNRQSSPPTTPAPPPVPAQVQVTTGPGAAQPPRQPSPPVASLTPTGVAGGSELYRIDPDGVPRRVWSHATDVVYAIAF DAGGRALLAAGNRGNLYRVESPTLYTGLLVMPATQVTALQMGAGGRLYAATGNAGKVFEVGPALESTGSVESDVFDSGSY SLWGRVTPEVMLNGGQLTLATRSGNLDQPQKNWSAWTPVAAGPKGGRSASPAARFVQWKATFTGAEGRSPELDSVDLAYL PKNLEPRIDEIETTPPNYRFPASSVSALSVIQSTLSLPPLGKHSTTSGGPQLTLDTTPAMQSAKGFLGARWSALDPNGDP LVFTVEIRGVKEAEWKLLKDKVNEKYLSWDSTAFPDGEYRIRVTASDAPGNPSAEVLTARLESSPFWIDNTPPKITGLAG VRIGSKLQLKWHAADALNNIAKAEYSVDGGDWKIAPPVTRLSDSQELDYELALDAGPGEHTVAVRVEDDYANQAVEKVVV H
Sequences:
>Translated_721_residues MKILSLLLAATSLFAGQTRTWTQGDSADFEKGILKNLSLRSDGRLSLAPVSRELFDTASSYLWALAQDSKGTLYAGGGTS AKLYRIPLDGKGKVVADLDALEIHAIAIDSKDRVYAATSPDGKIYRITGNGKPEVFYDPKAKYIWALAFDAAGNLFVATG DQGEIHRVTPDGKGRIFFKTEETHVRSMTIDGKGNLIAGTEPGGLVLRVSPAGDGFVLYQMAKKEVTAVAVAPDGAIYAA AVGNRQSSPPTTPAPPPVPAQVQVTTGPGAAQPPRQPSPPVASLTPTGVAGGSELYRIDPDGVPRRVWSHATDVVYAIAF DAGGRALLAAGNRGNLYRVESPTLYTGLLVMPATQVTALQMGAGGRLYAATGNAGKVFEVGPALESTGSVESDVFDSGSY SLWGRVTPEVMLNGGQLTLATRSGNLDQPQKNWSAWTPVAAGPKGGRSASPAARFVQWKATFTGAEGRSPELDSVDLAYL PKNLEPRIDEIETTPPNYRFPASSVSALSVIQSTLSLPPLGKHSTTSGGPQLTLDTTPAMQSAKGFLGARWSALDPNGDP LVFTVEIRGVKEAEWKLLKDKVNEKYLSWDSTAFPDGEYRIRVTASDAPGNPSAEVLTARLESSPFWIDNTPPKITGLAG VRIGSKLQLKWHAADALNNIAKAEYSVDGGDWKIAPPVTRLSDSQELDYELALDAGPGEHTVAVRVEDDYANQAVEKVVV H >Mature_721_residues MKILSLLLAATSLFAGQTRTWTQGDSADFEKGILKNLSLRSDGRLSLAPVSRELFDTASSYLWALAQDSKGTLYAGGGTS AKLYRIPLDGKGKVVADLDALEIHAIAIDSKDRVYAATSPDGKIYRITGNGKPEVFYDPKAKYIWALAFDAAGNLFVATG DQGEIHRVTPDGKGRIFFKTEETHVRSMTIDGKGNLIAGTEPGGLVLRVSPAGDGFVLYQMAKKEVTAVAVAPDGAIYAA AVGNRQSSPPTTPAPPPVPAQVQVTTGPGAAQPPRQPSPPVASLTPTGVAGGSELYRIDPDGVPRRVWSHATDVVYAIAF DAGGRALLAAGNRGNLYRVESPTLYTGLLVMPATQVTALQMGAGGRLYAATGNAGKVFEVGPALESTGSVESDVFDSGSY SLWGRVTPEVMLNGGQLTLATRSGNLDQPQKNWSAWTPVAAGPKGGRSASPAARFVQWKATFTGAEGRSPELDSVDLAYL PKNLEPRIDEIETTPPNYRFPASSVSALSVIQSTLSLPPLGKHSTTSGGPQLTLDTTPAMQSAKGFLGARWSALDPNGDP LVFTVEIRGVKEAEWKLLKDKVNEKYLSWDSTAFPDGEYRIRVTASDAPGNPSAEVLTARLESSPFWIDNTPPKITGLAG VRIGSKLQLKWHAADALNNIAKAEYSVDGGDWKIAPPVTRLSDSQELDYELALDAGPGEHTVAVRVEDDYANQAVEKVVV H
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 76436; Mature: 76436
Theoretical pI: Translated: 5.97; Mature: 5.97
Prosite motif: PS00398 RECOMBINASES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKILSLLLAATSLFAGQTRTWTQGDSADFEKGILKNLSLRSDGRLSLAPVSRELFDTASS CHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCEEECCCHHHHHHHHHH YLWALAQDSKGTLYAGGGTSAKLYRIPLDGKGKVVADLDALEIHAIAIDSKDRVYAATSP EEEEEEECCCCEEEECCCCCCEEEEEECCCCCCEEEECCCEEEEEEEECCCCCEEEEECC DGKIYRITGNGKPEVFYDPKAKYIWALAFDAAGNLFVATGDQGEIHRVTPDGKGRIFFKT CCEEEEEECCCCCCEEECCCCCEEEEEEEECCCCEEEEECCCCCEEEECCCCCCEEEEEE EETHVRSMTIDGKGNLIAGTEPGGLVLRVSPAGDGFVLYQMAKKEVTAVAVAPDGAIYAA CCCEEEEEEECCCCCEEECCCCCCEEEEEECCCCCEEEEEECCCCEEEEEECCCCCEEEE AVGNRQSSPPTTPAPPPVPAQVQVTTGPGAAQPPRQPSPPVASLTPTGVAGGSELYRIDP EECCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECC DGVPRRVWSHATDVVYAIAFDAGGRALLAAGNRGNLYRVESPTLYTGLLVMPATQVTALQ CCCCHHHHHHHCCEEEEEEECCCCCEEEEECCCCCEEEECCCCEEEEEEEECCCEEEEEE MGAGGRLYAATGNAGKVFEVGPALESTGSVESDVFDSGSYSLWGRVTPEVMLNGGQLTLA ECCCCEEEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCEEEEEECCHHHEEECCEEEEE TRSGNLDQPQKNWSAWTPVAAGPKGGRSASPAARFVQWKATFTGAEGRSPELDSVDLAYL ECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCEEEEEC PKNLEPRIDEIETTPPNYRFPASSVSALSVIQSTLSLPPLGKHSTTSGGPQLTLDTTPAM CCCCCCCCHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCH QSAKGFLGARWSALDPNGDPLVFTVEIRGVKEAEWKLLKDKVNEKYLSWDSTAFPDGEYR HHHCCCCCCEEEECCCCCCEEEEEEEECCCCHHHHHHHHHHHCCCEECCCCCCCCCCCEE IRVTASDAPGNPSAEVLTARLESSPFWIDNTPPKITGLAGVRIGSKLQLKWHAADALNNI EEEEECCCCCCCCHHEEEEEECCCCEEECCCCCCEEEEEEEEECCEEEEEEEHHHHHHHH AKAEYSVDGGDWKIAPPVTRLSDSQELDYELALDAGPGEHTVAVRVEDDYANQAVEKVVV HHCEEEECCCCEEECCCHHHCCCCCCCCEEEEEECCCCCEEEEEEECCCHHHHHHHHHHC H C >Mature Secondary Structure MKILSLLLAATSLFAGQTRTWTQGDSADFEKGILKNLSLRSDGRLSLAPVSRELFDTASS CHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCEEECCCHHHHHHHHHH YLWALAQDSKGTLYAGGGTSAKLYRIPLDGKGKVVADLDALEIHAIAIDSKDRVYAATSP EEEEEEECCCCEEEECCCCCCEEEEEECCCCCCEEEECCCEEEEEEEECCCCCEEEEECC DGKIYRITGNGKPEVFYDPKAKYIWALAFDAAGNLFVATGDQGEIHRVTPDGKGRIFFKT CCEEEEEECCCCCCEEECCCCCEEEEEEEECCCCEEEEECCCCCEEEECCCCCCEEEEEE EETHVRSMTIDGKGNLIAGTEPGGLVLRVSPAGDGFVLYQMAKKEVTAVAVAPDGAIYAA CCCEEEEEEECCCCCEEECCCCCCEEEEEECCCCCEEEEEECCCCEEEEEECCCCCEEEE AVGNRQSSPPTTPAPPPVPAQVQVTTGPGAAQPPRQPSPPVASLTPTGVAGGSELYRIDP EECCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECC DGVPRRVWSHATDVVYAIAFDAGGRALLAAGNRGNLYRVESPTLYTGLLVMPATQVTALQ CCCCHHHHHHHCCEEEEEEECCCCCEEEEECCCCCEEEECCCCEEEEEEEECCCEEEEEE MGAGGRLYAATGNAGKVFEVGPALESTGSVESDVFDSGSYSLWGRVTPEVMLNGGQLTLA ECCCCEEEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCEEEEEECCHHHEEECCEEEEE TRSGNLDQPQKNWSAWTPVAAGPKGGRSASPAARFVQWKATFTGAEGRSPELDSVDLAYL ECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCEEEEEC PKNLEPRIDEIETTPPNYRFPASSVSALSVIQSTLSLPPLGKHSTTSGGPQLTLDTTPAM CCCCCCCCHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCH QSAKGFLGARWSALDPNGDPLVFTVEIRGVKEAEWKLLKDKVNEKYLSWDSTAFPDGEYR HHHCCCCCCEEEECCCCCCEEEEEEEECCCCHHHHHHHHHHHCCCEECCCCCCCCCCCEE IRVTASDAPGNPSAEVLTARLESSPFWIDNTPPKITGLAGVRIGSKLQLKWHAADALNNI EEEEECCCCCCCCHHEEEEEECCCCEEECCCCCCEEEEEEEEECCEEEEEEEHHHHHHHH AKAEYSVDGGDWKIAPPVTRLSDSQELDYELALDAGPGEHTVAVRVEDDYANQAVEKVVV HHCEEEECCCCEEECCCHHHCCCCCCCCEEEEEECCCCCEEEEEEECCCHHHHHHHHHHC H C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA