Click here to switch to the map view.

The map label for this gene is 116626204

Identifier: 116626204

GI number: 116626204

Start: 8991396

End: 8993429

Strand: Direct

Name: 116626204

Synonym: Acid_7164

Alternate gene names: NA

Gene position: 8991396-8993429 (Clockwise)

Preceding gene: 116626200

Following gene: 116626205

Centisome position: 90.22

GC content: 65.63

Gene sequence:

>2034_bases
ATGTGGGGTATGCGGATCGCGGTGGGCTTGGTAATGGCGGGCTGCTGTATGGCGGAGCCGCGGCTGTTGTTGAACAGCGG
AGATGTGGCGCGGATCAAGCGAGTGGCGGCGAGCGAGCCGTGGGCGGCGAAGGTGGTGGCGGGCCTGATCCGGGATGCCG
ACGAGTGGCCGGAGCGGCACGTGCGGGAATTCGGGCTGGCGGAGTGGGCGCTGCCGAAAGAAGGCGCGGGCTGGTCGCAC
AATTACGTTTGCCCCGATCACGGGGTGCGGCTGACGCAGCGGCAGGGGAAGAATCTCTGCCCGATCGACGGCAAGGACTA
TCACGGCTGGCCGGTGGACTACGTGGTCTACATGCAGCGCAACGACGACACCGCGAAATCGGCTCGCGACCTGGGCCTGG
CGTGGCAGTTGACTGGTAAACGCGAATATGCGGAGAAGGCGCGGCGCATTTTCAACGCGTACTCCGATCTGTACCTCGCG
CTGCCGATTCACGACAATAACAATAAGCTGGACACGAAGACGGGGGCGCGCGTGATGTCGCAGACGCTTTCGGAGGCGAG
CTGGCTGGTGCCGCTGGAGTTTGGTTACGACCTGGTGCGCGACAGCATGCCGGAAGCGGAGCGGGCGCGGTTCGAAACCA
ACGTGCTGAAGGGCGCCGCGGCGGTGATCCGGCGCAATCAGGCAGGGAAGAGCAACTGGCAGAGCTGGCATAACGCGGCG
CTGCTGGGTGCGGGGCTGCTCACAGGCGATCAGGAGCTGGTGACGCTGGCGATCGACGGAGCGGGCGGTTTCCGGTTCCA
GATGCGCGAATCGGTGACGGCGGATGGGGCGTGGTTCGAGGGCTCATGGGGATATCATTTCTTCGCGCTGACTCCGCTGC
TGTTGACGCGCGAGATGGCGGAGAGGGCGGGGATCGCGCTGCCGGAGGCGGCGGCATTGAAGCGCATGCTGGACGCGCCG
CTGGCGAGCCTCTTTCCCGATGGCACACTGCCGAACTTCAACGACAGCGGGTACGCGAATCTGGCGAGCGAAGCTCCACG
CTACGACGTGGGGTACCGGCTGTTCGGCGATAGGCGTTATCTGACGGTGACGAACGGCGCGACGCGGGGATTGGACGCGC
TGCTGTGGGGCCCGGATAAGTTGCCGTCGGGAGCAGCGCCCTCGCTGGGCAGCGAACTGATGGAAGCGGCGGGTGTGGCG
ATTCTGCGGGTCGCCGGGAGCGACCACACGGTGGCGGTGAAGTTCGGGCCGCACGGCGGCGGGCACGGGCATTACGACAA
ACTGACCTTCATCAGTTATGCGGAAGGCGCGCGCCAGGCGGCCGATCCGGGAACGCAGGCGTACGGGGCGAAGACCCACG
GAACGTGGGACAAGACGACCGTCGCGCACAATACGATCTCGGTGGATGGCAAACAGCAGGCGGAGGCGGCGGGCAAGTTG
CTGGAGTGGAATCCGGGGGCGAAGGTGACGGAGATCCGGTTGGCTGCGGGTCCGGTATACCCGGGCGTGGAGATCGAACG
CACGCTGGTGCATACGGGGGAGTACACACTGGATATCGCGGAGGCGCGGTCGGTGGACGGCGCGGCGCACCTGTTCGACT
GGACGTATCACAACTTCGGCAGCCTGGATACGACACTGCCGCTGAAGCCCTACCTGGGGATGCCGCAGGCCAACGGTTAC
CAGCACCTGACGGAGACACGGGCGGCAAGTATCGATGACGAGTGGATGGTGACGTTCGCGCAGGAGAAATCGCGCATGCG
GGTGCAGGTGATGGGAGCGCCGGGGACAACGGTGGCGGCGGGTAACGGGCTGGGTCCGGACTTGCGGACGGCGGTACCGT
TCGTGATGGCGCGGCGCACGGCGCCGTCGGCGCGATTTGTGGCGGTCTACGAACCGTATCGCGAGGCGCCTGTGGTGAAG
AGCGTAGTGGAATCCGCGCCGGGAGTTTTCGTAGTGACGCTGGCTGGTTCACGCGATGAGATCGTGGTGACGCCGGGAAA
GTTCCGCTACCAGCGGACGGAGACGAAAAAATGA

Upstream 100 bases:

>100_bases
GGGGAGATGTCTGCGCGAAAGCGGCGGACAGGGAAAAGAGAAGGATGGCGAGGGTTCGCATAACTCGGAATGAGTATACA
ACGGAGGGCCGCGGGTTACG

Downstream 100 bases:

>100_bases
GGCCGGAGCGGGTGGTGCTGGAGGGACGGCATGTGAAGATCGTCCCGCTGGACGCGGCGGCGCACGGTCCCGCACTTTAC
GACGGGTCGTGCGGAGCGGA

Product: heparinase II/III family protein

Products: NA

Alternate protein names: Heparinase II/III-Like; Heparinase II/III-Like Protein; Alginate Lyase

Number of amino acids: Translated: 677; Mature: 677

Protein sequence:

>677_residues
MWGMRIAVGLVMAGCCMAEPRLLLNSGDVARIKRVAASEPWAAKVVAGLIRDADEWPERHVREFGLAEWALPKEGAGWSH
NYVCPDHGVRLTQRQGKNLCPIDGKDYHGWPVDYVVYMQRNDDTAKSARDLGLAWQLTGKREYAEKARRIFNAYSDLYLA
LPIHDNNNKLDTKTGARVMSQTLSEASWLVPLEFGYDLVRDSMPEAERARFETNVLKGAAAVIRRNQAGKSNWQSWHNAA
LLGAGLLTGDQELVTLAIDGAGGFRFQMRESVTADGAWFEGSWGYHFFALTPLLLTREMAERAGIALPEAAALKRMLDAP
LASLFPDGTLPNFNDSGYANLASEAPRYDVGYRLFGDRRYLTVTNGATRGLDALLWGPDKLPSGAAPSLGSELMEAAGVA
ILRVAGSDHTVAVKFGPHGGGHGHYDKLTFISYAEGARQAADPGTQAYGAKTHGTWDKTTVAHNTISVDGKQQAEAAGKL
LEWNPGAKVTEIRLAAGPVYPGVEIERTLVHTGEYTLDIAEARSVDGAAHLFDWTYHNFGSLDTTLPLKPYLGMPQANGY
QHLTETRAASIDDEWMVTFAQEKSRMRVQVMGAPGTTVAAGNGLGPDLRTAVPFVMARRTAPSARFVAVYEPYREAPVVK
SVVESAPGVFVVTLAGSRDEIVVTPGKFRYQRTETKK

Sequences:

>Translated_677_residues
MWGMRIAVGLVMAGCCMAEPRLLLNSGDVARIKRVAASEPWAAKVVAGLIRDADEWPERHVREFGLAEWALPKEGAGWSH
NYVCPDHGVRLTQRQGKNLCPIDGKDYHGWPVDYVVYMQRNDDTAKSARDLGLAWQLTGKREYAEKARRIFNAYSDLYLA
LPIHDNNNKLDTKTGARVMSQTLSEASWLVPLEFGYDLVRDSMPEAERARFETNVLKGAAAVIRRNQAGKSNWQSWHNAA
LLGAGLLTGDQELVTLAIDGAGGFRFQMRESVTADGAWFEGSWGYHFFALTPLLLTREMAERAGIALPEAAALKRMLDAP
LASLFPDGTLPNFNDSGYANLASEAPRYDVGYRLFGDRRYLTVTNGATRGLDALLWGPDKLPSGAAPSLGSELMEAAGVA
ILRVAGSDHTVAVKFGPHGGGHGHYDKLTFISYAEGARQAADPGTQAYGAKTHGTWDKTTVAHNTISVDGKQQAEAAGKL
LEWNPGAKVTEIRLAAGPVYPGVEIERTLVHTGEYTLDIAEARSVDGAAHLFDWTYHNFGSLDTTLPLKPYLGMPQANGY
QHLTETRAASIDDEWMVTFAQEKSRMRVQVMGAPGTTVAAGNGLGPDLRTAVPFVMARRTAPSARFVAVYEPYREAPVVK
SVVESAPGVFVVTLAGSRDEIVVTPGKFRYQRTETKK
>Mature_677_residues
MWGMRIAVGLVMAGCCMAEPRLLLNSGDVARIKRVAASEPWAAKVVAGLIRDADEWPERHVREFGLAEWALPKEGAGWSH
NYVCPDHGVRLTQRQGKNLCPIDGKDYHGWPVDYVVYMQRNDDTAKSARDLGLAWQLTGKREYAEKARRIFNAYSDLYLA
LPIHDNNNKLDTKTGARVMSQTLSEASWLVPLEFGYDLVRDSMPEAERARFETNVLKGAAAVIRRNQAGKSNWQSWHNAA
LLGAGLLTGDQELVTLAIDGAGGFRFQMRESVTADGAWFEGSWGYHFFALTPLLLTREMAERAGIALPEAAALKRMLDAP
LASLFPDGTLPNFNDSGYANLASEAPRYDVGYRLFGDRRYLTVTNGATRGLDALLWGPDKLPSGAAPSLGSELMEAAGVA
ILRVAGSDHTVAVKFGPHGGGHGHYDKLTFISYAEGARQAADPGTQAYGAKTHGTWDKTTVAHNTISVDGKQQAEAAGKL
LEWNPGAKVTEIRLAAGPVYPGVEIERTLVHTGEYTLDIAEARSVDGAAHLFDWTYHNFGSLDTTLPLKPYLGMPQANGY
QHLTETRAASIDDEWMVTFAQEKSRMRVQVMGAPGTTVAAGNGLGPDLRTAVPFVMARRTAPSARFVAVYEPYREAPVVK
SVVESAPGVFVVTLAGSRDEIVVTPGKFRYQRTETKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 73866; Mature: 73866

Theoretical pI: Translated: 7.00; Mature: 7.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWGMRIAVGLVMAGCCMAEPRLLLNSGDVARIKRVAASEPWAAKVVAGLIRDADEWPERH
CCCHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCHHHHHHHHHHHCHHHHHHHH
VREFGLAEWALPKEGAGWSHNYVCPDHGVRLTQRQGKNLCPIDGKDYHGWPVDYVVYMQR
HHHCCCHHCCCCCCCCCCCCCCCCCCCCEEEHHHCCCCCCCCCCCCCCCCCEEEEEEEEC
NDDTAKSARDLGLAWQLTGKREYAEKARRIFNAYSDLYLALPIHDNNNKLDTKTGARVMS
CCCHHHHHHHCCEEEEECCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCHHHHHHHH
QTLSEASWLVPLEFGYDLVRDSMPEAERARFETNVLKGAAAVIRRNQAGKSNWQSWHNAA
HHHHHCCEEEEHHHCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
LLGAGLLTGDQELVTLAIDGAGGFRFQMRESVTADGAWFEGSWGYHFFALTPLLLTREMA
HHCCCEECCCCEEEEEEEECCCCEEEEECCCCCCCCCEECCCCCEEHHHHHHHHHHHHHH
ERAGIALPEAAALKRMLDAPLASLFPDGTLPNFNDSGYANLASEAPRYDVGYRLFGDRRY
HHCCCCCCHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCHHCCCCCCCCCEEEECCEEE
LTVTNGATRGLDALLWGPDKLPSGAAPSLGSELMEAAGVAILRVAGSDHTVAVKFGPHGG
EEEECCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHCCEEEEEEECCCCEEEEEECCCCC
GHGHYDKLTFISYAEGARQAADPGTQAYGAKTHGTWDKTTVAHNTISVDGKQQAEAAGKL
CCCCCCCEEEEEHHCCCHHHCCCCCHHCCCCCCCCCCCCEEEECEEECCCHHHHHHHCCE
LEWNPGAKVTEIRLAAGPVYPGVEIERTLVHTGEYTLDIAEARSVDGAAHLFDWTYHNFG
EEECCCCCEEEEEEECCCCCCCCEEEEEEEECCCEEEEEHHHCCCCCHHHEEEECCCCCC
SLDTTLPLKPYLGMPQANGYQHLTETRAASIDDEWMVTFAQEKSRMRVQVMGAPGTTVAA
CCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHEEEEECCCCCEEEEEECCCCCEEEC
GNGLGPDLRTAVPFVMARRTAPSARFVAVYEPYREAPVVKSVVESAPGVFVVTLAGSRDE
CCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHCCCCEEEEEEECCCCC
IVVTPGKFRYQRTETKK
EEECCCCEEECCCCCCC
>Mature Secondary Structure
MWGMRIAVGLVMAGCCMAEPRLLLNSGDVARIKRVAASEPWAAKVVAGLIRDADEWPERH
CCCHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCHHHHHHHHHHHCHHHHHHHH
VREFGLAEWALPKEGAGWSHNYVCPDHGVRLTQRQGKNLCPIDGKDYHGWPVDYVVYMQR
HHHCCCHHCCCCCCCCCCCCCCCCCCCCEEEHHHCCCCCCCCCCCCCCCCCEEEEEEEEC
NDDTAKSARDLGLAWQLTGKREYAEKARRIFNAYSDLYLALPIHDNNNKLDTKTGARVMS
CCCHHHHHHHCCEEEEECCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCHHHHHHHH
QTLSEASWLVPLEFGYDLVRDSMPEAERARFETNVLKGAAAVIRRNQAGKSNWQSWHNAA
HHHHHCCEEEEHHHCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
LLGAGLLTGDQELVTLAIDGAGGFRFQMRESVTADGAWFEGSWGYHFFALTPLLLTREMA
HHCCCEECCCCEEEEEEEECCCCEEEEECCCCCCCCCEECCCCCEEHHHHHHHHHHHHHH
ERAGIALPEAAALKRMLDAPLASLFPDGTLPNFNDSGYANLASEAPRYDVGYRLFGDRRY
HHCCCCCCHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCHHCCCCCCCCCEEEECCEEE
LTVTNGATRGLDALLWGPDKLPSGAAPSLGSELMEAAGVAILRVAGSDHTVAVKFGPHGG
EEEECCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHCCEEEEEEECCCCEEEEEECCCCC
GHGHYDKLTFISYAEGARQAADPGTQAYGAKTHGTWDKTTVAHNTISVDGKQQAEAAGKL
CCCCCCCEEEEEHHCCCHHHCCCCCHHCCCCCCCCCCCCEEEECEEECCCHHHHHHHCCE
LEWNPGAKVTEIRLAAGPVYPGVEIERTLVHTGEYTLDIAEARSVDGAAHLFDWTYHNFG
EEECCCCCEEEEEEECCCCCCCCEEEEEEEECCCEEEEEHHHCCCCCHHHEEEECCCCCC
SLDTTLPLKPYLGMPQANGYQHLTETRAASIDDEWMVTFAQEKSRMRVQVMGAPGTTVAA
CCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHEEEEECCCCCEEEEEECCCCCEEEC
GNGLGPDLRTAVPFVMARRTAPSARFVAVYEPYREAPVVKSVVESAPGVFVVTLAGSRDE
CCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHCCCCEEEEEEECCCCC
IVVTPGKFRYQRTETKK
EEECCCCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA