| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116626160
Identifier: 116626160
GI number: 116626160
Start: 8938887
End: 8939642
Strand: Direct
Name: 116626160
Synonym: Acid_7120
Alternate gene names: NA
Gene position: 8938887-8939642 (Clockwise)
Preceding gene: 116626159
Following gene: 116626161
Centisome position: 89.7
GC content: 64.15
Gene sequence:
>756_bases TTGATTCGCCCCGTGGTTCCTGATTCCCTGCTGGTCATCATCCCCGCCTTCAACGAGGAAGGCGCCATTGCCCGCGTGGT TGGCGAAGTCCATCAGTTCGTTCCCGGTGTCCCGGTGCTCGTGATCGATGACTCTTCCACGGATGACACCATTGTGGCCG CCCGCGCGGCCGGCGCCGACGTGCTCCCCGTGCCGCACCACCTCGGCCTCGGCGGCTGCGTGCAGGCCGGCTATAAACTT GCCTGGGAACTCGGTTTCAGCTACGTGATCCGCGTGGATGGCGATGGCCAGCACGACCCCCGCGACATTCCGCGTGTCTT CGAAAAACTGCGTACTTCGGGCTGCGAAATGGTCATCGGCTCGCGCTTCGTCACCGCCAATGGTTCGCGCACCGGCACCG TTCGCTCGCTCGGCATTCGCTTTTTTCGCCTCGTGCTGCGTCCCATCCTCGGCAAGCCGGTGCACGATCCCACGTCCGGA TTCGTGGGTGTCAATCGCCGCGCGCTGAATGTCTTCCGCAGCAGCTTCCCGCTCGACTATCCGGAGATCGAGGCGCTGGT AGTGCTGCAGCGCCGCAGGTTCCGCTTCGCCGAGGTGCCGTGCAAGATGCGCCCCCGTACCACGGGCCGCTCTTCCATTA CCGCGCTCAAGAGCCTGTACTACGTGGTGCACGTGCTTCTGGGCGTGTTCGTGAACGTGCTGAAATTCGAACGCCGGCTG CATCGCGCTCCGCGAGCGCCGGAAGAGGAACAGTGA
Upstream 100 bases:
>100_bases GCCAGCGCCGTGAGATCCGCTCACGGGCGCGCATTACTCCCGCGGTCTTTGGCCGCCTCCTGCGCAGCCACGCAATCAGC GCTCGAAGGATGGCCGCGCT
Downstream 100 bases:
>100_bases TGGACCGCCTCTTAAATGTAACTACCGTACTTAGCGTAATTCTTCTCTTGCTGATCTTGATCAGCGTCCGCCGCGCGCAC ATTCGCGTGGAATACTCGGT
Product: glycosyl transferase family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 251; Mature: 251
Protein sequence:
>251_residues MIRPVVPDSLLVIIPAFNEEGAIARVVGEVHQFVPGVPVLVIDDSSTDDTIVAARAAGADVLPVPHHLGLGGCVQAGYKL AWELGFSYVIRVDGDGQHDPRDIPRVFEKLRTSGCEMVIGSRFVTANGSRTGTVRSLGIRFFRLVLRPILGKPVHDPTSG FVGVNRRALNVFRSSFPLDYPEIEALVVLQRRRFRFAEVPCKMRPRTTGRSSITALKSLYYVVHVLLGVFVNVLKFERRL HRAPRAPEEEQ
Sequences:
>Translated_251_residues MIRPVVPDSLLVIIPAFNEEGAIARVVGEVHQFVPGVPVLVIDDSSTDDTIVAARAAGADVLPVPHHLGLGGCVQAGYKL AWELGFSYVIRVDGDGQHDPRDIPRVFEKLRTSGCEMVIGSRFVTANGSRTGTVRSLGIRFFRLVLRPILGKPVHDPTSG FVGVNRRALNVFRSSFPLDYPEIEALVVLQRRRFRFAEVPCKMRPRTTGRSSITALKSLYYVVHVLLGVFVNVLKFERRL HRAPRAPEEEQ >Mature_251_residues MIRPVVPDSLLVIIPAFNEEGAIARVVGEVHQFVPGVPVLVIDDSSTDDTIVAARAAGADVLPVPHHLGLGGCVQAGYKL AWELGFSYVIRVDGDGQHDPRDIPRVFEKLRTSGCEMVIGSRFVTANGSRTGTVRSLGIRFFRLVLRPILGKPVHDPTSG FVGVNRRALNVFRSSFPLDYPEIEALVVLQRRRFRFAEVPCKMRPRTTGRSSITALKSLYYVVHVLLGVFVNVLKFERRL HRAPRAPEEEQ
Specific function: Unknown
COG id: COG0463
COG function: function code M; Glycosyltransferases involved in cell wall biogenesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001173 [H]
Pfam domain/function: PF00535 Glycos_transf_2 [H]
EC number: NA
Molecular weight: Translated: 27830; Mature: 27830
Theoretical pI: Translated: 10.19; Mature: 10.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRPVVPDSLLVIIPAFNEEGAIARVVGEVHQFVPGVPVLVIDDSSTDDTIVAARAAGAD CCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCEEEEEECCCCC VLPVPHHLGLGGCVQAGYKLAWELGFSYVIRVDGDGQHDPRDIPRVFEKLRTSGCEMVIG CCCCCCCCCCHHHHHHHHHHHEECCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEC SRFVTANGSRTGTVRSLGIRFFRLVLRPILGKPVHDPTSGFVGVNRRALNVFRSSFPLDY CEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCC PEIEALVVLQRRRFRFAEVPCKMRPRTTGRSSITALKSLYYVVHVLLGVFVNVLKFERRL CHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HRAPRAPEEEQ HHCCCCCCCCC >Mature Secondary Structure MIRPVVPDSLLVIIPAFNEEGAIARVVGEVHQFVPGVPVLVIDDSSTDDTIVAARAAGAD CCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCEEEEEECCCCC VLPVPHHLGLGGCVQAGYKLAWELGFSYVIRVDGDGQHDPRDIPRVFEKLRTSGCEMVIG CCCCCCCCCCHHHHHHHHHHHEECCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEC SRFVTANGSRTGTVRSLGIRFFRLVLRPILGKPVHDPTSGFVGVNRRALNVFRSSFPLDY CEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCC PEIEALVVLQRRRFRFAEVPCKMRPRTTGRSSITALKSLYYVVHVLLGVFVNVLKFERRL CHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HRAPRAPEEEQ HHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]