| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116626089
Identifier: 116626089
GI number: 116626089
Start: 8863351
End: 8864706
Strand: Direct
Name: 116626089
Synonym: Acid_7047
Alternate gene names: NA
Gene position: 8863351-8864706 (Clockwise)
Preceding gene: 116626088
Following gene: 116626091
Centisome position: 88.94
GC content: 62.54
Gene sequence:
>1356_bases ATGAGGACCAAAACCAGTCTGGCGGTGGTTTTCTGCTGTTATTGCCTGACACCGGGCACGGCGCAGACAGCCCAGACTTC CGAGGATCCGGTGGCCGTCTTCACGGAGCATCCGCGCCTGTTCCTGCGCCCTCAGCGCATCCGCCTGCTGAAGCGGGAAC GTGAGCGCGCCTCGGCGCGGTGGAACCAGTTTGAGACGCTCGTGGCGGGCAACGCTCCCATGCCGCAGCCAGGCTTCGCC TGGGCGCTTTATTACCAGGTCTCGGGCAACGCGGAGTACGGTAAGAAGGCGGTGGAGTGGTCGCTCACCACGGCCGCCGA CTTGCGGCAGCAGGCGCTGGTGTTCGACTGGTGTCAGGATCTGATGAGCGACGCACAGCGGCGCGATCTGAGCGCCCGCA TGGCGAAGGGAATCGGCGACCCGTCCGACACTTCGATCGCGGCGGTGCGCGGCAGGACGCTCGCCGCCATCGCGCTCTAC GACCATACGCCCCAGGCGCCGCAGCGTGCGCTCGAGCAGATTGTGCACCAGTGGTGGGACCGCCGGATGCTTCCGGCGCT GCGCGGCGGAAAGAGCGTTGTGGGGCGAGACGAGGCCTACCCGCTGTGGGAGCTTCTGCACGCGATCCGTGACAACACCA ATATTGATCTGCGCGAGACAGTGCCGCGCTTCTTCAAGGATTTCCCGATCGAGCACCTGTTGACCCACTATCCGGCAACC TACGAAGCACCCGAGAATCAGTACCGAATCGGCCTGACGAAGAGCGCGGGCGAGCCCGACCTGAACGCCGCCGCGCTTTC ACGGGCGGCCGAACTGGAGATGGTGGCGCTAGACGTCAACGCTGCCGAAAGCCAGATGCTGCAGGGCTGGCTGATGCATG ACCACTTCATGCTGCGCGGTACATTCGGAGCGCCGTACGAGTTTCTGTGGGCGAATCCCTACCAGCCCGGTTTGAGCTAT TATCATGTGCCGCTGATTTACCACAACAATGACTTCGGCAGGTTATTCGTGCGCTCGAGTTGGGACGAGGATGCGGAGTG GTTCGGCTACTGGGACGGGAACATGCAGATGTTCTCGCAGGGCCACCTGACGCCGTTGAGCGCTCAACTGAACGCGCCGC CGATTTCCCTGAAAGAGGCGCTGCTTTGCTTCGCGCAGCGCGCGCGCAAATTCCGCGTCACGTTGGACGAAGAAGAAGCT GTATTCATCCTGGGATTGCAGCCCAAGCGCACGTACCAGGTGGAGATCGACGACGAAGAGATTTTTGAGACGCAAGCCGA TGCCGGCGGAATTCTGGAGCTCGATGTACCGCGCGGGAAGGCGACCGGCTTGCGATTGAAAGAAGTTACGCCTTAA
Upstream 100 bases:
>100_bases CGAATTAAAGCTTTTCGAGTCAGTATTTTGTGCAAGTCAATATGAGCAGGATTGTGGACCGCCTGGGCAAGCGCTGTGTC GGTATGACACAATTGCTGGG
Downstream 100 bases:
>100_bases AAGGCCCAGCGCCAAAGGCTGGCACCCACGGTGTAGCCGGCGCCGACGGCTGCGAAGAGGACCAGGTCGCCCTTCTTCAG GCGGCCCTCGGAGATGGCGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 451; Mature: 451
Protein sequence:
>451_residues MRTKTSLAVVFCCYCLTPGTAQTAQTSEDPVAVFTEHPRLFLRPQRIRLLKRERERASARWNQFETLVAGNAPMPQPGFA WALYYQVSGNAEYGKKAVEWSLTTAADLRQQALVFDWCQDLMSDAQRRDLSARMAKGIGDPSDTSIAAVRGRTLAAIALY DHTPQAPQRALEQIVHQWWDRRMLPALRGGKSVVGRDEAYPLWELLHAIRDNTNIDLRETVPRFFKDFPIEHLLTHYPAT YEAPENQYRIGLTKSAGEPDLNAAALSRAAELEMVALDVNAAESQMLQGWLMHDHFMLRGTFGAPYEFLWANPYQPGLSY YHVPLIYHNNDFGRLFVRSSWDEDAEWFGYWDGNMQMFSQGHLTPLSAQLNAPPISLKEALLCFAQRARKFRVTLDEEEA VFILGLQPKRTYQVEIDDEEIFETQADAGGILELDVPRGKATGLRLKEVTP
Sequences:
>Translated_451_residues MRTKTSLAVVFCCYCLTPGTAQTAQTSEDPVAVFTEHPRLFLRPQRIRLLKRERERASARWNQFETLVAGNAPMPQPGFA WALYYQVSGNAEYGKKAVEWSLTTAADLRQQALVFDWCQDLMSDAQRRDLSARMAKGIGDPSDTSIAAVRGRTLAAIALY DHTPQAPQRALEQIVHQWWDRRMLPALRGGKSVVGRDEAYPLWELLHAIRDNTNIDLRETVPRFFKDFPIEHLLTHYPAT YEAPENQYRIGLTKSAGEPDLNAAALSRAAELEMVALDVNAAESQMLQGWLMHDHFMLRGTFGAPYEFLWANPYQPGLSY YHVPLIYHNNDFGRLFVRSSWDEDAEWFGYWDGNMQMFSQGHLTPLSAQLNAPPISLKEALLCFAQRARKFRVTLDEEEA VFILGLQPKRTYQVEIDDEEIFETQADAGGILELDVPRGKATGLRLKEVTP >Mature_451_residues MRTKTSLAVVFCCYCLTPGTAQTAQTSEDPVAVFTEHPRLFLRPQRIRLLKRERERASARWNQFETLVAGNAPMPQPGFA WALYYQVSGNAEYGKKAVEWSLTTAADLRQQALVFDWCQDLMSDAQRRDLSARMAKGIGDPSDTSIAAVRGRTLAAIALY DHTPQAPQRALEQIVHQWWDRRMLPALRGGKSVVGRDEAYPLWELLHAIRDNTNIDLRETVPRFFKDFPIEHLLTHYPAT YEAPENQYRIGLTKSAGEPDLNAAALSRAAELEMVALDVNAAESQMLQGWLMHDHFMLRGTFGAPYEFLWANPYQPGLSY YHVPLIYHNNDFGRLFVRSSWDEDAEWFGYWDGNMQMFSQGHLTPLSAQLNAPPISLKEALLCFAQRARKFRVTLDEEEA VFILGLQPKRTYQVEIDDEEIFETQADAGGILELDVPRGKATGLRLKEVTP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51269; Mature: 51269
Theoretical pI: Translated: 5.82; Mature: 5.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTKTSLAVVFCCYCLTPGTAQTAQTSEDPVAVFTEHPRLFLRPQRIRLLKRERERASAR CCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCEEEECHHHHHHHHHHHHHHHHH WNQFETLVAGNAPMPQPGFAWALYYQVSGNAEYGKKAVEWSLTTAADLRQQALVFDWCQD HHHHHEEEECCCCCCCCCCEEEEEEEEECCCHHCCCEEEEEEHHHHHHHHHHHHHHHHHH LMSDAQRRDLSARMAKGIGDPSDTSIAAVRGRTLAAIALYDHTPQAPQRALEQIVHQWWD HHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCEEEEEEEECCCCCHHHHHHHHHHHHHHC RRMLPALRGGKSVVGRDEAYPLWELLHAIRDNTNIDLRETVPRFFKDFPIEHLLTHYPAT CHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHCCCC YEAPENQYRIGLTKSAGEPDLNAAALSRAAELEMVALDVNAAESQMLQGWLMHDHFMLRG CCCCCCCEEEEEECCCCCCCCHHHHHHHHHCEEEEEEECCHHHHHHHHHHHHHCEEEEEE TFGAPYEFLWANPYQPGLSYYHVPLIYHNNDFGRLFVRSSWDEDAEWFGYWDGNMQMFSQ CCCCCEEEEECCCCCCCCCEEEEEEEEECCCCEEEEEECCCCCCCCEEEEECCCEEEECC GHLTPLSAQLNAPPISLKEALLCFAQRARKFRVTLDEEEAVFILGLQPKRTYQVEIDDEE CCCCEEECCCCCCCCHHHHHHHHHHHHCCEEEEEECCCCEEEEEECCCCCEEEEEECHHH IFETQADAGGILELDVPRGKATGLRLKEVTP HHHHCCCCCCEEEEECCCCCCCCEEEECCCC >Mature Secondary Structure MRTKTSLAVVFCCYCLTPGTAQTAQTSEDPVAVFTEHPRLFLRPQRIRLLKRERERASAR CCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCEEEECHHHHHHHHHHHHHHHHH WNQFETLVAGNAPMPQPGFAWALYYQVSGNAEYGKKAVEWSLTTAADLRQQALVFDWCQD HHHHHEEEECCCCCCCCCCEEEEEEEEECCCHHCCCEEEEEEHHHHHHHHHHHHHHHHHH LMSDAQRRDLSARMAKGIGDPSDTSIAAVRGRTLAAIALYDHTPQAPQRALEQIVHQWWD HHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCEEEEEEEECCCCCHHHHHHHHHHHHHHC RRMLPALRGGKSVVGRDEAYPLWELLHAIRDNTNIDLRETVPRFFKDFPIEHLLTHYPAT CHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHCCCC YEAPENQYRIGLTKSAGEPDLNAAALSRAAELEMVALDVNAAESQMLQGWLMHDHFMLRG CCCCCCCEEEEEECCCCCCCCHHHHHHHHHCEEEEEEECCHHHHHHHHHHHHHCEEEEEE TFGAPYEFLWANPYQPGLSYYHVPLIYHNNDFGRLFVRSSWDEDAEWFGYWDGNMQMFSQ CCCCCEEEEECCCCCCCCCEEEEEEEEECCCCEEEEEECCCCCCCCEEEEECCCEEEECC GHLTPLSAQLNAPPISLKEALLCFAQRARKFRVTLDEEEAVFILGLQPKRTYQVEIDDEE CCCCEEECCCCCCCCHHHHHHHHHHHHCCEEEEEECCCCEEEEEECCCCCEEEEEECHHH IFETQADAGGILELDVPRGKATGLRLKEVTP HHHHCCCCCCEEEEECCCCCCCCEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA