| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is yceG [H]
Identifier: 116626055
GI number: 116626055
Start: 8816725
End: 8817714
Strand: Direct
Name: yceG [H]
Synonym: Acid_7013
Alternate gene names: 116626055
Gene position: 8816725-8817714 (Clockwise)
Preceding gene: 116626054
Following gene: 116626056
Centisome position: 88.47
GC content: 66.57
Gene sequence:
>990_bases ATGAAGCTTCTGCGGCGGCTGGGAGTGGTGATTCTGCTGATAGCGGCGGCGGGCGGTTTCGCGGCCTGGCGGCTGGCGCA GCCCTACAGCGGCTTTCAGGGTGAAACCTTCGTGGAATTTCCGCGCGGGACGGGCACGCGGGCGATGGGCGAACAACTGG CGCGCGCCGGAGTGGTGCGCAGCCAGTGGGAGTTCCTGCTGGCGCGGTGGGCGAGCGGGGCGCGTGTGCTCCAGGCTGGG GAGTACAAGTTCGACCATGCGGCGAGCCCTCTCGAGGTAGTGGGGCGGATCGCGCGCGGGGACATCTTCTACTACGAGCT GGTAGTGCCGGAGGGACGCAACCTGTTTGACATCGGGGCCTCGGTGGAGCAACTGGGCGTTTTTCCGGCGGCGAAATTTC TGCAGGCGGCGCGCAATCCGGCGATGATCCACGATCTGGACCCGGAGGCGCCGACGCTGGAGGGCTACCTTTTTCCCGAC ACGTACCGGCTGGCTCGGAAGACGACGCCGGAGCAGTTGTGCCGGACCATGACGGGCAAGTTCCGGGCGGCGTGGAAGAG CCTGCACACGGAGGCGGACGTGCATCACACGGTCACGCTGGCGTCGCTGGTGGAGAAGGAAGGCAAGCTGGCGGAGGAGC GGCCTCGAATCGCGGCGGTGTTTGAGAACCGGCTAAAGATCGGGATGAAGCTGGATTGCGACCCGACGACGATCTATGCG GCGCTGCTGCAGGATCGTTATCACGGGGTGATTCACCGCAGCGACCTGGATAGCGATCAGGCGTACAACACGTACCGGCA CGCGGGGCTGCCGCCGGGTCCGATCGCGAACCCGGGGCTGGCATCGATGCGCGCGACGTTGGAGCCGGCGAACAGCGATT CGCTGTACTTCGTCGCGCGCGCGGACGGCAGCGGGGGCCACGAGTTCTCGAGCAATATCGCCGCGCACACGAGCGCGGTG GAGCGTTACCGGCGTGCCCTCCGCAAATAA
Upstream 100 bases:
>100_bases GGCGGGTGCTGCGTTCGAGCGGGATCAGTATTGAGAAGCGGGCCGCGGCGGTGGACAAATTGTCGGCGGTGATCCTGCTG CAGAGTTACCTGGATTCGCT
Downstream 100 bases:
>100_bases GTCGTTGAAGCAGCAGTTTCGGGAATACCTGGCGGCCGAGCAGCCGGCGCGGATTACGGAGGCTGTGTGGCGCGGGCTGC TGGCGCGACTGGCGCCGGTA
Product: aminodeoxychorismate lyase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 329; Mature: 329
Protein sequence:
>329_residues MKLLRRLGVVILLIAAAGGFAAWRLAQPYSGFQGETFVEFPRGTGTRAMGEQLARAGVVRSQWEFLLARWASGARVLQAG EYKFDHAASPLEVVGRIARGDIFYYELVVPEGRNLFDIGASVEQLGVFPAAKFLQAARNPAMIHDLDPEAPTLEGYLFPD TYRLARKTTPEQLCRTMTGKFRAAWKSLHTEADVHHTVTLASLVEKEGKLAEERPRIAAVFENRLKIGMKLDCDPTTIYA ALLQDRYHGVIHRSDLDSDQAYNTYRHAGLPPGPIANPGLASMRATLEPANSDSLYFVARADGSGGHEFSSNIAAHTSAV ERYRRALRK
Sequences:
>Translated_329_residues MKLLRRLGVVILLIAAAGGFAAWRLAQPYSGFQGETFVEFPRGTGTRAMGEQLARAGVVRSQWEFLLARWASGARVLQAG EYKFDHAASPLEVVGRIARGDIFYYELVVPEGRNLFDIGASVEQLGVFPAAKFLQAARNPAMIHDLDPEAPTLEGYLFPD TYRLARKTTPEQLCRTMTGKFRAAWKSLHTEADVHHTVTLASLVEKEGKLAEERPRIAAVFENRLKIGMKLDCDPTTIYA ALLQDRYHGVIHRSDLDSDQAYNTYRHAGLPPGPIANPGLASMRATLEPANSDSLYFVARADGSGGHEFSSNIAAHTSAV ERYRRALRK >Mature_329_residues MKLLRRLGVVILLIAAAGGFAAWRLAQPYSGFQGETFVEFPRGTGTRAMGEQLARAGVVRSQWEFLLARWASGARVLQAG EYKFDHAASPLEVVGRIARGDIFYYELVVPEGRNLFDIGASVEQLGVFPAAKFLQAARNPAMIHDLDPEAPTLEGYLFPD TYRLARKTTPEQLCRTMTGKFRAAWKSLHTEADVHHTVTLASLVEKEGKLAEERPRIAAVFENRLKIGMKLDCDPTTIYA ALLQDRYHGVIHRSDLDSDQAYNTYRHAGLPPGPIANPGLASMRATLEPANSDSLYFVARADGSGGHEFSSNIAAHTSAV ERYRRALRK
Specific function: Unknown
COG id: COG1559
COG function: function code R; Predicted periplasmic solute-binding protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0755 family [H]
Homologues:
Organism=Escherichia coli, GI1787339, Length=329, Percent_Identity=35.258358662614, Blast_Score=170, Evalue=1e-43,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003770 [H]
Pfam domain/function: PF02618 ADC_lyase [H]
EC number: NA
Molecular weight: Translated: 36342; Mature: 36342
Theoretical pI: Translated: 9.18; Mature: 9.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLLRRLGVVILLIAAAGGFAAWRLAQPYSGFQGETFVEFPRGTGTRAMGEQLARAGVVR CHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHH SQWEFLLARWASGARVLQAGEYKFDHAASPLEVVGRIARGDIFYYELVVPEGRNLFDIGA HHHHHHHHHHCCCCCEEECCCCCCCCCCCHHHHHHHHHCCCEEEEEEEECCCCCEEECCC SVEQLGVFPAAKFLQAARNPAMIHDLDPEAPTLEGYLFPDTYRLARKTTPEQLCRTMTGK CHHHHCCHHHHHHHHHHCCCCEEEECCCCCCCCCEEECCCHHHHHHCCCHHHHHHHHHHH FRAAWKSLHTEADVHHTVTLASLVEKEGKLAEERPRIAAVFENRLKIGMKLDCDPTTIYA HHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHCCEEECCCHHHHHH ALLQDRYHGVIHRSDLDSDQAYNTYRHAGLPPGPIANPGLASMRATLEPANSDSLYFVAR HHHHHHHHCCEECCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCCEEEEEE ADGSGGHEFSSNIAAHTSAVERYRRALRK CCCCCCCHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKLLRRLGVVILLIAAAGGFAAWRLAQPYSGFQGETFVEFPRGTGTRAMGEQLARAGVVR CHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHH SQWEFLLARWASGARVLQAGEYKFDHAASPLEVVGRIARGDIFYYELVVPEGRNLFDIGA HHHHHHHHHHCCCCCEEECCCCCCCCCCCHHHHHHHHHCCCEEEEEEEECCCCCEEECCC SVEQLGVFPAAKFLQAARNPAMIHDLDPEAPTLEGYLFPDTYRLARKTTPEQLCRTMTGK CHHHHCCHHHHHHHHHHCCCCEEEECCCCCCCCCEEECCCHHHHHHCCCHHHHHHHHHHH FRAAWKSLHTEADVHHTVTLASLVEKEGKLAEERPRIAAVFENRLKIGMKLDCDPTTIYA HHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHCCEEECCCHHHHHH ALLQDRYHGVIHRSDLDSDQAYNTYRHAGLPPGPIANPGLASMRATLEPANSDSLYFVAR HHHHHHHHCCEECCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCCEEEEEE ADGSGGHEFSSNIAAHTSAVERYRRALRK CCCCCCCHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503; 1644759; 8631667 [H]