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The map label for this gene is korB [H]

Identifier: 116626031

GI number: 116626031

Start: 8777627

End: 8778514

Strand: Direct

Name: korB [H]

Synonym: Acid_6989

Alternate gene names: 116626031

Gene position: 8777627-8778514 (Clockwise)

Preceding gene: 116626030

Following gene: 116626032

Centisome position: 88.08

GC content: 61.15

Gene sequence:

>888_bases
ATGAGTGAAGCTCTTCTCGATATCCCGTTGAACGCGAAGAACCCGGTCGAACCCTTTCTTCGCATGGACCGCATGCCGCA
CATATGGTGCCCCGCCTGCGGAATCGGCACCACCGTCAACTGCTTCACACGCGCCCTGGAATCCTCCAAACTCAACCTGG
ATAAGGTCGCCGTCGTCTCCGGCATCGGCTGCACCGGCCGCGTCGCCGGCTACGCCAACCTCGATAGCTTCCACACCACG
CACGGCCGCGCCATCCCCTTCGCCACCGGTCTCAAGCTCTCCAATCCCGAGCTCCAGGTCGTGGTCTACTCCGGCGATGG
CGACTTGTTCGCGATCGGCGGCAACCATTTCATCCACGCCGCACGCCGTAATATGGATATCAAGGTGATCTGCGTCAATA
ACCTCACCTATGCGATGACCGGCGGACAGACTGCGCCCACCACGCCCGGCCAGGTGATCTCCGCTACCTCTCCCTACGGT
GTCTTTGAGCCGTCGTTCAACCTGGTGCAGCTCGCCGAGGCCGCCGGCGCCTCCTACGTCGCGCGCTGGACCACCTTTCA
CGTCAAACAACTCGCCCGCAGCATGGAAGAGATGCTCCAGAAGAAGGGCTTCTGCTTCATCGAAGTCCTTTCTCCCTGCC
CCACGCTCTACCAGCGCCGCAACAAGATGGGTGACGGCCTGGACGCAATGAAGTTCTACAAACAGGTCAGCAAAGTGCGC
AATGGCGCGCCCACCAGTGAATGCGCCTTGACCAAGGCTGGCGAAATCGTAGTCGGAAAATTTGTGGACCGCGACCGCCC
CGATTACCGCACCCTGCTCACCCAGCAGATGACGGAAAGTCTCGGCGACCGCTACGCGGATCCGGAGGTCTCATGCAGCG
AGGGCTAA

Upstream 100 bases:

>100_bases
GCTCCTCCGGCGGCGCCGCAAAGGTCGTCTCCGTCCCCCACGCCGGCGGCAGCGTGCATCACCCCGAAGTCATTCTCAAA
GCCATTCTGGAGGCAGCTCG

Downstream 100 bases:

>100_bases
ACGAACAGAAGAAACTAGGACTCACCGAAATCCGAATCGGTGGTTTCGGCGGCCAGGGTGTCATCCTCGCCGCCGCCGTA
ATCGGCAAAGCCGCCGCCAT

Product: 2-oxoglutarate ferredoxin oxidoreductase subunit beta

Products: NA

Alternate protein names: 2-ketoglutarate oxidoreductase beta chain; KOR; 2-oxoglutarate-ferredoxin oxidoreductase subunit beta [H]

Number of amino acids: Translated: 295; Mature: 294

Protein sequence:

>295_residues
MSEALLDIPLNAKNPVEPFLRMDRMPHIWCPACGIGTTVNCFTRALESSKLNLDKVAVVSGIGCTGRVAGYANLDSFHTT
HGRAIPFATGLKLSNPELQVVVYSGDGDLFAIGGNHFIHAARRNMDIKVICVNNLTYAMTGGQTAPTTPGQVISATSPYG
VFEPSFNLVQLAEAAGASYVARWTTFHVKQLARSMEEMLQKKGFCFIEVLSPCPTLYQRRNKMGDGLDAMKFYKQVSKVR
NGAPTSECALTKAGEIVVGKFVDRDRPDYRTLLTQQMTESLGDRYADPEVSCSEG

Sequences:

>Translated_295_residues
MSEALLDIPLNAKNPVEPFLRMDRMPHIWCPACGIGTTVNCFTRALESSKLNLDKVAVVSGIGCTGRVAGYANLDSFHTT
HGRAIPFATGLKLSNPELQVVVYSGDGDLFAIGGNHFIHAARRNMDIKVICVNNLTYAMTGGQTAPTTPGQVISATSPYG
VFEPSFNLVQLAEAAGASYVARWTTFHVKQLARSMEEMLQKKGFCFIEVLSPCPTLYQRRNKMGDGLDAMKFYKQVSKVR
NGAPTSECALTKAGEIVVGKFVDRDRPDYRTLLTQQMTESLGDRYADPEVSCSEG
>Mature_294_residues
SEALLDIPLNAKNPVEPFLRMDRMPHIWCPACGIGTTVNCFTRALESSKLNLDKVAVVSGIGCTGRVAGYANLDSFHTTH
GRAIPFATGLKLSNPELQVVVYSGDGDLFAIGGNHFIHAARRNMDIKVICVNNLTYAMTGGQTAPTTPGQVISATSPYGV
FEPSFNLVQLAEAAGASYVARWTTFHVKQLARSMEEMLQKKGFCFIEVLSPCPTLYQRRNKMGDGLDAMKFYKQVSKVRN
GAPTSECALTKAGEIVVGKFVDRDRPDYRTLLTQQMTESLGDRYADPEVSCSEG

Specific function: Unknown

COG id: COG1013

COG function: function code C; Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011766 [H]

Pfam domain/function: PF02775 TPP_enzyme_C [H]

EC number: =1.2.7.3 [H]

Molecular weight: Translated: 32185; Mature: 32054

Theoretical pI: Translated: 7.94; Mature: 7.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEALLDIPLNAKNPVEPFLRMDRMPHIWCPACGIGTTVNCFTRALESSKLNLDKVAVVS
CCCCEEECCCCCCCCHHHHHHHCCCCCEECCCCCCCCHHHHHHHHHHHCCCCHHHHHEEE
GIGCTGRVAGYANLDSFHTTHGRAIPFATGLKLSNPELQVVVYSGDGDLFAIGGNHFIHA
CCCCCCCCCCCCCCCCCCCCCCCCCCEECCCEECCCCEEEEEEECCCCEEEECCCEEEEE
ARRNMDIKVICVNNLTYAMTGGQTAPTTPGQVISATSPYGVFEPSFNLVQLAEAAGASYV
HHCCCCEEEEEECCEEEEEECCCCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHCCCHHH
ARWTTFHVKQLARSMEEMLQKKGFCFIEVLSPCPTLYQRRNKMGDGLDAMKFYKQVSKVR
HHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHCCCCHHHHHHHHHHHHHH
NGAPTSECALTKAGEIVVGKFVDRDRPDYRTLLTQQMTESLGDRYADPEVSCSEG
CCCCCCHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
SEALLDIPLNAKNPVEPFLRMDRMPHIWCPACGIGTTVNCFTRALESSKLNLDKVAVVS
CCCEEECCCCCCCCHHHHHHHCCCCCEECCCCCCCCHHHHHHHHHHHCCCCHHHHHEEE
GIGCTGRVAGYANLDSFHTTHGRAIPFATGLKLSNPELQVVVYSGDGDLFAIGGNHFIHA
CCCCCCCCCCCCCCCCCCCCCCCCCCEECCCEECCCCEEEEEEECCCCEEEECCCEEEEE
ARRNMDIKVICVNNLTYAMTGGQTAPTTPGQVISATSPYGVFEPSFNLVQLAEAAGASYV
HHCCCCEEEEEECCEEEEEECCCCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHCCCHHH
ARWTTFHVKQLARSMEEMLQKKGFCFIEVLSPCPTLYQRRNKMGDGLDAMKFYKQVSKVR
HHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHCCCCHHHHHHHHHHHHHH
NGAPTSECALTKAGEIVVGKFVDRDRPDYRTLLTQQMTESLGDRYADPEVSCSEG
CCCCCCHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]