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The map label for this gene is yciF [H]

Identifier: 116625957

GI number: 116625957

Start: 8685730

End: 8686323

Strand: Direct

Name: yciF [H]

Synonym: Acid_6915

Alternate gene names: 116625957

Gene position: 8685730-8686323 (Clockwise)

Preceding gene: 116625956

Following gene: 116625958

Centisome position: 87.16

GC content: 57.91

Gene sequence:

>594_bases
ATGCCACAACTTAAGGAACTACTAGTCGAACAACTGCAGGACCTGCTTCATGCGGAGAGCCAACTCACGGACGCATTGCC
GCAAATGGCAGAGGCCGCGAATCACCCGAAGCTGAAGGAGGCGTTTGAAAAGCACCTGGTCCAGACCCAGGGTCACGTCG
AACGCTTGCACAAGATATTCGAGGTTCTGGGGGAGAAAGCCCAGCCAAAAACATGCAAGGCCATGATCGGTCTGATCGAG
GAAGGCAAAGAAACGATCGAGGAAGGCGCGGAAAAGAAGCCCCTGGCCGCTGATTTGGCTCTGATCGGCGCAGCGCAGCG
AGTGGAACATTACGAAATCGCGGCTTACGGCACCGCGAAAGCTCTGGCGCGCCAGATAGGGCTTCTCGAGGCCGCGCGAC
TCCTATCGCACACTTTGGGCGAAGAGGAGAGCACCGATTTTCTCTTGACTGCAATTTCCGATCCGCTGCTTCAGCAGGCG
GCCATCCAGGACGGCGGCATTCCAATAAACCTGGAAGCTGTAGAAAGGCAGGGCCCCGCGCGCGCCACGAGAAAAGCGGA
GAAGCCCGAAAAGATGGCGAGCCGGGGACGTTAG

Upstream 100 bases:

>100_bases
CGCCGGCCTTTCAGGAGTTCGAGTCAGCGCAGGCGGGCACCCGGCAGCAGGGAACCAACGGGGCGGCCAAAGAGTAAGAA
CCATTTTTGGGAGGATAAAC

Downstream 100 bases:

>100_bases
GAGACTCCATGAAACGAGAAGTCATCCAGCCGCATGGCAACGACAAGCGTTACATCCGGCGTGATAAGGAAGGCCAGTTC
ACTTCCCAGCAAGTCAATGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 197; Mature: 196

Protein sequence:

>197_residues
MPQLKELLVEQLQDLLHAESQLTDALPQMAEAANHPKLKEAFEKHLVQTQGHVERLHKIFEVLGEKAQPKTCKAMIGLIE
EGKETIEEGAEKKPLAADLALIGAAQRVEHYEIAAYGTAKALARQIGLLEAARLLSHTLGEEESTDFLLTAISDPLLQQA
AIQDGGIPINLEAVERQGPARATRKAEKPEKMASRGR

Sequences:

>Translated_197_residues
MPQLKELLVEQLQDLLHAESQLTDALPQMAEAANHPKLKEAFEKHLVQTQGHVERLHKIFEVLGEKAQPKTCKAMIGLIE
EGKETIEEGAEKKPLAADLALIGAAQRVEHYEIAAYGTAKALARQIGLLEAARLLSHTLGEEESTDFLLTAISDPLLQQA
AIQDGGIPINLEAVERQGPARATRKAEKPEKMASRGR
>Mature_196_residues
PQLKELLVEQLQDLLHAESQLTDALPQMAEAANHPKLKEAFEKHLVQTQGHVERLHKIFEVLGEKAQPKTCKAMIGLIEE
GKETIEEGAEKKPLAADLALIGAAQRVEHYEIAAYGTAKALARQIGLLEAARLLSHTLGEEESTDFLLTAISDPLLQQAA
IQDGGIPINLEAVERQGPARATRKAEKPEKMASRGR

Specific function: Unknown

COG id: COG3685

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787512, Length=154, Percent_Identity=44.8051948051948, Blast_Score=119, Evalue=2e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010287
- InterPro:   IPR012347
- InterPro:   IPR009078 [H]

Pfam domain/function: PF05974 DUF892 [H]

EC number: NA

Molecular weight: Translated: 21560; Mature: 21429

Theoretical pI: Translated: 5.63; Mature: 5.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPQLKELLVEQLQDLLHAESQLTDALPQMAEAANHPKLKEAFEKHLVQTQGHVERLHKIF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
EVLGEKAQPKTCKAMIGLIEEGKETIEEGAEKKPLAADLALIGAAQRVEHYEIAAYGTAK
HHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
ALARQIGLLEAARLLSHTLGEEESTDFLLTAISDPLLQQAAIQDGGIPINLEAVERQGPA
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHCCHH
RATRKAEKPEKMASRGR
HHHHHHCCHHHHHHCCC
>Mature Secondary Structure 
PQLKELLVEQLQDLLHAESQLTDALPQMAEAANHPKLKEAFEKHLVQTQGHVERLHKIF
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
EVLGEKAQPKTCKAMIGLIEEGKETIEEGAEKKPLAADLALIGAAQRVEHYEIAAYGTAK
HHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
ALARQIGLLEAARLLSHTLGEEESTDFLLTAISDPLLQQAAIQDGGIPINLEAVERQGPA
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHCCHH
RATRKAEKPEKMASRGR
HHHHHHCCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3058546; 9097039; 9278503; 8455549 [H]