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The map label for this gene is 116625933

Identifier: 116625933

GI number: 116625933

Start: 8664278

End: 8665804

Strand: Direct

Name: 116625933

Synonym: Acid_6890

Alternate gene names: NA

Gene position: 8664278-8665804 (Clockwise)

Preceding gene: 116625931

Following gene: 116625937

Centisome position: 86.94

GC content: 60.38

Gene sequence:

>1527_bases
ATGGAACTAAGACTTCGAAATATCACATCAGCGGGGATCGCATTTCGTACCGGATTTCTGCTCTTGAGTATGGTGGCGGC
ACGAGCTCAAGCGCCGATGGTCGTTGGCTATCCAGCCAACTTCGACACCTTCAACAACACCGGAGCGCCGATTTATGGTT
TTGAAATCGAGGCCGACGGCATACAGCCATCTGATGTCACGCGAGTCTTTCCGTCGAATTTCCCGGTGCCCGCGGGATCG
CCCTGTGTAATCCGATATTGTTCCGGCACCGTGACGCCGTTTCCCGGCGGAGTCTACATCCGCTGGATGAGTCCGTGGGA
CTCCGCCGCGCAGCAATTCACGATCTCCACACCGGTCTACAACGGCACGGTCGCCAACGGCGAGAGTTGCTGGACCGGGG
GACTTGGGACGCGCTATCCGACCGCCGGATGTGAGCACTTCGGCATCAGCACGCTCAAGAATCCCACAAATATCATCTAT
CGTTGGCTGGTTCCCGATCCGAACAATCCGGGGAATCTAATGTATTACGCCGGAGGCGGCACCCCGATCCCTGGCGCGCC
TGCCGCGCCGCCATATGTGCCTCTGCCGCAGCCTGTTATCAACGTGATTCCGCCCGTCAAGCTAGGTGCCCAGCCGGTGG
TTGATTTCCAGATTCCGGCTCCCCCTCCGCCAGCGCCCGTGCAGTTCGGACCCGCCCAGTGGGTTAAGGTCTATAAACTC
GAACTGCCCAACCAAGTGGATCTGAACGATCTGCTGGGCGGCAACCCGGCCGTTCCGGAAGCGCCGCAACCGGCCGAGAT
GGAATGGAAGCTGTTGCAATACAACCCGCACAGCGCCAACAGCGGAGTGCTGCATAATCAAGCCCAATTGGGGAACGGTT
CGCACGCTGTAGTGCGCCGTTATGAGCATTATCAGTACACTGGCACGTTCGATCCCCTCACCCACGAGGCCCTTTGCGCC
GATCCCACCTGTTCGGCGCCTGGTCCCGGTGAATTGGGAGCGATCATCGGCGCGCAGAATGCGGCCGCCAATCTGGAGAC
GCCGTCCATCTCTGTCACCAAGATCGGCAGCGGCAACGTCAACGGCGCGGGCGGAGCGATCAATTGCGGCGTAACCTGCT
CCGCCAACCTGACCGCGGGAGCCAGTGAAAGCCTGACGGCGACACCTCCCTCCAACGGCGTGTTTAACGGATGGACCGGT
GCCTGCACAGGCAGCCAGCAAACGTGCGCATTTACAGCTCAAGGCGCGATGACCACAACCGCCAGGTTCACCACGGTGTA
CACGCTCTCTATCGGGCGCGGCGGAAATGGCTCGGTCAGCGGCACGCCTAACGGCGAATTCGGCACTTTCATCAATTGCG
GAAGCAGTTGCTCGGCGAAAATCCAGCAAGGCACTACGGTCACTCTGACCGCAACGCCGGCGGCGGGTTTGAACTTCATC
GGCTGGAGCGGTTCCTGCTCGGGACTGGCGCCCACCTGCAGCGTGACTGTCAACGCCGATACCAAGGTGCAGGCCACCTT
CAAGTAA

Upstream 100 bases:

>100_bases
GGCGCCGGCGTGTCTCCGCTTCCTCTGCTGTTCCGCGATGTCCCACCGGCCGTCATACCGGTCATAGCAGGTATAACAAA
CACACCTTTAAGGAATAGAA

Downstream 100 bases:

>100_bases
CAATCCTGACAGTCCAGGCGATTGAACTTGCCTGATTCGGCCGCGGAGGGATGCCACCGCGGCCATTAGCCATCGGTTGT
GAGTATGATCTCCCGATACA

Product: hypothetical protein

Products: NA

Alternate protein names: PKD Domain-Containing Protein; Cell Wall/Surface Repeat Protein; Cell Wall/Surface Repeat-Containing Protein

Number of amino acids: Translated: 508; Mature: 508

Protein sequence:

>508_residues
MELRLRNITSAGIAFRTGFLLLSMVAARAQAPMVVGYPANFDTFNNTGAPIYGFEIEADGIQPSDVTRVFPSNFPVPAGS
PCVIRYCSGTVTPFPGGVYIRWMSPWDSAAQQFTISTPVYNGTVANGESCWTGGLGTRYPTAGCEHFGISTLKNPTNIIY
RWLVPDPNNPGNLMYYAGGGTPIPGAPAAPPYVPLPQPVINVIPPVKLGAQPVVDFQIPAPPPPAPVQFGPAQWVKVYKL
ELPNQVDLNDLLGGNPAVPEAPQPAEMEWKLLQYNPHSANSGVLHNQAQLGNGSHAVVRRYEHYQYTGTFDPLTHEALCA
DPTCSAPGPGELGAIIGAQNAAANLETPSISVTKIGSGNVNGAGGAINCGVTCSANLTAGASESLTATPPSNGVFNGWTG
ACTGSQQTCAFTAQGAMTTTARFTTVYTLSIGRGGNGSVSGTPNGEFGTFINCGSSCSAKIQQGTTVTLTATPAAGLNFI
GWSGSCSGLAPTCSVTVNADTKVQATFK

Sequences:

>Translated_508_residues
MELRLRNITSAGIAFRTGFLLLSMVAARAQAPMVVGYPANFDTFNNTGAPIYGFEIEADGIQPSDVTRVFPSNFPVPAGS
PCVIRYCSGTVTPFPGGVYIRWMSPWDSAAQQFTISTPVYNGTVANGESCWTGGLGTRYPTAGCEHFGISTLKNPTNIIY
RWLVPDPNNPGNLMYYAGGGTPIPGAPAAPPYVPLPQPVINVIPPVKLGAQPVVDFQIPAPPPPAPVQFGPAQWVKVYKL
ELPNQVDLNDLLGGNPAVPEAPQPAEMEWKLLQYNPHSANSGVLHNQAQLGNGSHAVVRRYEHYQYTGTFDPLTHEALCA
DPTCSAPGPGELGAIIGAQNAAANLETPSISVTKIGSGNVNGAGGAINCGVTCSANLTAGASESLTATPPSNGVFNGWTG
ACTGSQQTCAFTAQGAMTTTARFTTVYTLSIGRGGNGSVSGTPNGEFGTFINCGSSCSAKIQQGTTVTLTATPAAGLNFI
GWSGSCSGLAPTCSVTVNADTKVQATFK
>Mature_508_residues
MELRLRNITSAGIAFRTGFLLLSMVAARAQAPMVVGYPANFDTFNNTGAPIYGFEIEADGIQPSDVTRVFPSNFPVPAGS
PCVIRYCSGTVTPFPGGVYIRWMSPWDSAAQQFTISTPVYNGTVANGESCWTGGLGTRYPTAGCEHFGISTLKNPTNIIY
RWLVPDPNNPGNLMYYAGGGTPIPGAPAAPPYVPLPQPVINVIPPVKLGAQPVVDFQIPAPPPPAPVQFGPAQWVKVYKL
ELPNQVDLNDLLGGNPAVPEAPQPAEMEWKLLQYNPHSANSGVLHNQAQLGNGSHAVVRRYEHYQYTGTFDPLTHEALCA
DPTCSAPGPGELGAIIGAQNAAANLETPSISVTKIGSGNVNGAGGAINCGVTCSANLTAGASESLTATPPSNGVFNGWTG
ACTGSQQTCAFTAQGAMTTTARFTTVYTLSIGRGGNGSVSGTPNGEFGTFINCGSSCSAKIQQGTTVTLTATPAAGLNFI
GWSGSCSGLAPTCSVTVNADTKVQATFK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52681; Mature: 52681

Theoretical pI: Translated: 6.23; Mature: 6.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELRLRNITSAGIAFRTGFLLLSMVAARAQAPMVVGYPANFDTFNNTGAPIYGFEIEADG
CCEEECCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCEEEEEEEEECC
IQPSDVTRVFPSNFPVPAGSPCVIRYCSGTVTPFPGGVYIRWMSPWDSAAQQFTISTPVY
CCCCCCEEECCCCCCCCCCCCEEEEEECCCCCCCCCCEEEEEECCCCCCHHEEEEECCCC
NGTVANGESCWTGGLGTRYPTAGCEHFGISTLKNPTNIIYRWLVPDPNNPGNLMYYAGGG
CCEECCCCCEEECCCCCCCCCCCCCCCCCHHCCCCCEEEEEEECCCCCCCCCEEEECCCC
TPIPGAPAAPPYVPLPQPVINVIPPVKLGAQPVVDFQIPAPPPPAPVQFGPAQWVKVYKL
CCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEEEE
ELPNQVDLNDLLGGNPAVPEAPQPAEMEWKLLQYNPHSANSGVLHNQAQLGNGSHAVVRR
ECCCCCCHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCEEECHHHCCCCCHHHHEE
YEHYQYTGTFDPLTHEALCADPTCSAPGPGELGAIIGAQNAAANLETPSISVTKIGSGNV
EHHEEEECCCCCCCCCCEECCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEEECCCCC
NGAGGAINCGVTCSANLTAGASESLTATPPSNGVFNGWTGACTGSQQTCAFTAQGAMTTT
CCCCCEEEECEEEECCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCEEEE
ARFTTVYTLSIGRGGNGSVSGTPNGEFGTFINCGSSCSAKIQQGTTVTLTATPAAGLNFI
EEEEEEEEEEECCCCCCCCCCCCCCCCCCEEECCCCCCCEECCCCEEEEEECCCCCCEEE
GWSGSCSGLAPTCSVTVNADTKVQATFK
ECCCCCCCCCCEEEEEECCCCEEEEEEC
>Mature Secondary Structure
MELRLRNITSAGIAFRTGFLLLSMVAARAQAPMVVGYPANFDTFNNTGAPIYGFEIEADG
CCEEECCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCEEEEEEEEECC
IQPSDVTRVFPSNFPVPAGSPCVIRYCSGTVTPFPGGVYIRWMSPWDSAAQQFTISTPVY
CCCCCCEEECCCCCCCCCCCCEEEEEECCCCCCCCCCEEEEEECCCCCCHHEEEEECCCC
NGTVANGESCWTGGLGTRYPTAGCEHFGISTLKNPTNIIYRWLVPDPNNPGNLMYYAGGG
CCEECCCCCEEECCCCCCCCCCCCCCCCCHHCCCCCEEEEEEECCCCCCCCCEEEECCCC
TPIPGAPAAPPYVPLPQPVINVIPPVKLGAQPVVDFQIPAPPPPAPVQFGPAQWVKVYKL
CCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEEEE
ELPNQVDLNDLLGGNPAVPEAPQPAEMEWKLLQYNPHSANSGVLHNQAQLGNGSHAVVRR
ECCCCCCHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCEEECHHHCCCCCHHHHEE
YEHYQYTGTFDPLTHEALCADPTCSAPGPGELGAIIGAQNAAANLETPSISVTKIGSGNV
EHHEEEECCCCCCCCCCEECCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEEECCCCC
NGAGGAINCGVTCSANLTAGASESLTATPPSNGVFNGWTGACTGSQQTCAFTAQGAMTTT
CCCCCEEEECEEEECCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCEEEE
ARFTTVYTLSIGRGGNGSVSGTPNGEFGTFINCGSSCSAKIQQGTTVTLTATPAAGLNFI
EEEEEEEEEEECCCCCCCCCCCCCCCCCCEEECCCCCCCEECCCCEEEEEECCCCCCEEE
GWSGSCSGLAPTCSVTVNADTKVQATFK
ECCCCCCCCCCEEEEEECCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA