| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116625917
Identifier: 116625917
GI number: 116625917
Start: 8635226
End: 8636083
Strand: Reverse
Name: 116625917
Synonym: Acid_6874
Alternate gene names: NA
Gene position: 8636083-8635226 (Counterclockwise)
Preceding gene: 116625918
Following gene: 116625912
Centisome position: 86.66
GC content: 59.32
Gene sequence:
>858_bases ATGCCCACTTTTTCCGTCCGCTGCGCTCTCATTGCGGCATTCGCTGCCGGGAGCGCAGCGCAGAGTTCCAGTAGCTGGAC TGAGCCGTTCCCGCCGCATCGCATCGCCGGGAATTTGTATTATGTCGGATCGCGGGGGCTGGCCTCGTACCTGATCGCCA CGCCCGAAGGGCACATCCTCATCAACAGCAGCCTGAAAACTTCCGTACCGCTGATCGAGACGAGTATCACGAAACTCGGC TTCCAGCTCTCGGATGTGAAGATCCTCCTGGTCAGTCACGCACATTGGGATCACAACGCGGGTAGCGCAGATCTCAAAGG CCGGACCGGCGCGAAGTACATGGTGATGGAGCCGGATGTACCCGTAACCGAAGACGGCGGCAAATCCGACTTCTTTTACG GGGACTCGCCGGAGTCACTCTATCCACCGGCGAAGGTGGACCGCGTCTTACATGACGGAGACCAGGTGAAAATTGGGGGC TCCGTCCTGACCGCCCATCTCACCCCCGGACACACAAAGGGTTGCACCACATGGACCATGAAGGTCAGCGAAGGCGGCAA GACCTATGACGCCGTGATCGTGGGCAGCCCGAATGTGAATGCCGGGTTCCAGCTCGTGAACAACGCGAAATACCCCAGGA TCGCAGACGATTATGTGCGGACCTTCGAGGTTTTGAGAGCGCTGCACTGCGACATTTTTCTGGGCGCCCACGGCGATTAC TACGGGTTGGAGCGCAAGTTCAGCCGCTACGCCGCGAACGGACCGGGCGTCTTCATAGACCCCGATGGATATCGCGCCTA TGTAGCCGAACGAGAGGAGGCCTTCCGACGCGAATTGGAGCGGCAGAAGAAGAAGTAG
Upstream 100 bases:
>100_bases ATTCGAATCTGAGCAGCCCCAGCTTCGGCCGGATCATCTCCACGGCAGTCAATATGCGGCAGATGCAGTTTGCCATGAAG TACGTGTTCTAATCGAACCC
Downstream 100 bases:
>100_bases CATCGCCCTGCGGCAGGATGAAAAGGACGCCGCTGTTTCTCACAACACGACGTGGCAAGAGGCGGCTCGTCGTGATCATG ATCGATGGTTTGCGTCATTT
Product: beta-lactamase
Products: NA
Alternate protein names: Beta-lactamase type II; Penicillinase [H]
Number of amino acids: Translated: 285; Mature: 284
Protein sequence:
>285_residues MPTFSVRCALIAAFAAGSAAQSSSSWTEPFPPHRIAGNLYYVGSRGLASYLIATPEGHILINSSLKTSVPLIETSITKLG FQLSDVKILLVSHAHWDHNAGSADLKGRTGAKYMVMEPDVPVTEDGGKSDFFYGDSPESLYPPAKVDRVLHDGDQVKIGG SVLTAHLTPGHTKGCTTWTMKVSEGGKTYDAVIVGSPNVNAGFQLVNNAKYPRIADDYVRTFEVLRALHCDIFLGAHGDY YGLERKFSRYAANGPGVFIDPDGYRAYVAEREEAFRRELERQKKK
Sequences:
>Translated_285_residues MPTFSVRCALIAAFAAGSAAQSSSSWTEPFPPHRIAGNLYYVGSRGLASYLIATPEGHILINSSLKTSVPLIETSITKLG FQLSDVKILLVSHAHWDHNAGSADLKGRTGAKYMVMEPDVPVTEDGGKSDFFYGDSPESLYPPAKVDRVLHDGDQVKIGG SVLTAHLTPGHTKGCTTWTMKVSEGGKTYDAVIVGSPNVNAGFQLVNNAKYPRIADDYVRTFEVLRALHCDIFLGAHGDY YGLERKFSRYAANGPGVFIDPDGYRAYVAEREEAFRRELERQKKK >Mature_284_residues PTFSVRCALIAAFAAGSAAQSSSSWTEPFPPHRIAGNLYYVGSRGLASYLIATPEGHILINSSLKTSVPLIETSITKLGF QLSDVKILLVSHAHWDHNAGSADLKGRTGAKYMVMEPDVPVTEDGGKSDFFYGDSPESLYPPAKVDRVLHDGDQVKIGGS VLTAHLTPGHTKGCTTWTMKVSEGGKTYDAVIVGSPNVNAGFQLVNNAKYPRIADDYVRTFEVLRALHCDIFLGAHGDYY GLERKFSRYAANGPGVFIDPDGYRAYVAEREEAFRRELERQKKK
Specific function: Has a high activity against imipenem [H]
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-B beta-lactamase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001018 - InterPro: IPR001279 [H]
Pfam domain/function: PF00753 Lactamase_B [H]
EC number: =3.5.2.6 [H]
Molecular weight: Translated: 31133; Mature: 31002
Theoretical pI: Translated: 7.70; Mature: 7.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTFSVRCALIAAFAAGSAAQSSSSWTEPFPPHRIAGNLYYVGSRGLASYLIATPEGHIL CCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHCCCEEEEECCCCEEEEEECCCCCEE INSSLKTSVPLIETSITKLGFQLSDVKILLVSHAHWDHNAGSADLKGRTGAKYMVMEPDV ECCCCCCCCCHHHHHHHHHCEEECCEEEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCC PVTEDGGKSDFFYGDSPESLYPPAKVDRVLHDGDQVKIGGSVLTAHLTPGHTKGCTTWTM CCCCCCCCCCCEECCCCCCCCCCHHHHHHHCCCCEEEECCEEEEEEECCCCCCCCEEEEE KVSEGGKTYDAVIVGSPNVNAGFQLVNNAKYPRIADDYVRTFEVLRALHCDIFLGAHGDY EECCCCCEEEEEEEECCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHCEEEEECCCCC YGLERKFSRYAANGPGVFIDPDGYRAYVAEREEAFRRELERQKKK CCHHHHHHHHCCCCCEEEECCCCCEEHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure PTFSVRCALIAAFAAGSAAQSSSSWTEPFPPHRIAGNLYYVGSRGLASYLIATPEGHIL CCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHCCCEEEEECCCCEEEEEECCCCCEE INSSLKTSVPLIETSITKLGFQLSDVKILLVSHAHWDHNAGSADLKGRTGAKYMVMEPDV ECCCCCCCCCHHHHHHHHHCEEECCEEEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCC PVTEDGGKSDFFYGDSPESLYPPAKVDRVLHDGDQVKIGGSVLTAHLTPGHTKGCTTWTM CCCCCCCCCCCEECCCCCCCCCCHHHHHHHCCCCEEEECCEEEEEEECCCCCCCCEEEEE KVSEGGKTYDAVIVGSPNVNAGFQLVNNAKYPRIADDYVRTFEVLRALHCDIFLGAHGDY EECCCCCEEEEEEEECCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHCEEEEECCCCC YGLERKFSRYAANGPGVFIDPDGYRAYVAEREEAFRRELERQKKK CCHHHHHHHHCCCCCEEEECCCCCEEHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8018721; 3931629; 9811546 [H]