| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116625887
Identifier: 116625887
GI number: 116625887
Start: 8572095
End: 8572577
Strand: Direct
Name: 116625887
Synonym: Acid_6841
Alternate gene names: NA
Gene position: 8572095-8572577 (Clockwise)
Preceding gene: 116625882
Following gene: 116625888
Centisome position: 86.02
GC content: 51.55
Gene sequence:
>483_bases ATGATGAAAGGTCGTACGCAACCGCATGGAACAATGATGCGCCGAAAACTCCTTCTTGTTTCATTACTCGTGATTCTGGC CGCAGAAGTGCTCCCGGCGAACGTTCCGGAAGGATTTTCCTGGGTTAGCATCGAGACAGATCAATCGACAATGGCAGTCG TTCGACGTGCCCTCCACGACGCCACAATCACGGCCATTCGGGAAGTTGGCGTCAAAGGTGGATTTGCAATTGTAATGACA GTTTCGAGGGAAGAAGGCGCTCCGACGCCTGACTATGACCTGTGGTCTATATATAACGTCTCGATGACAACCGGAACGGC TCAGATTCTCGTGAGCGGCTACGGTGTCAAGCTTCTAGATTGGATCGGCAGAAGGGGCGAGGAGTTGGCCATTACTTACT ATTCTTGTTGGGAGTGTGAGGCCACGACGATCTTTACAACACTCCATTTCAAGCTTGGTGTCGGTGGCACGGTGGCTCAA TAA
Upstream 100 bases:
>100_bases GTCCGGGTGATCTGTCAATCTACGGTAACGCCGTTTTTCTTCCACAACGGCTTTTTGGTCGCCATGAACGTTCCCTTAAC GCCTCTGCTGCCAGCCAGTT
Downstream 100 bases:
>100_bases GGGCCAGGACGTTAAGTATCCTCAGCCCGGCGCAGTTGTCCATATTACGGATGTCGGTGAGCCATACGACGACAGGGACG ACGTTGACCAAGTCTTTGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 160; Mature: 160
Protein sequence:
>160_residues MMKGRTQPHGTMMRRKLLLVSLLVILAAEVLPANVPEGFSWVSIETDQSTMAVVRRALHDATITAIREVGVKGGFAIVMT VSREEGAPTPDYDLWSIYNVSMTTGTAQILVSGYGVKLLDWIGRRGEELAITYYSCWECEATTIFTTLHFKLGVGGTVAQ
Sequences:
>Translated_160_residues MMKGRTQPHGTMMRRKLLLVSLLVILAAEVLPANVPEGFSWVSIETDQSTMAVVRRALHDATITAIREVGVKGGFAIVMT VSREEGAPTPDYDLWSIYNVSMTTGTAQILVSGYGVKLLDWIGRRGEELAITYYSCWECEATTIFTTLHFKLGVGGTVAQ >Mature_160_residues MMKGRTQPHGTMMRRKLLLVSLLVILAAEVLPANVPEGFSWVSIETDQSTMAVVRRALHDATITAIREVGVKGGFAIVMT VSREEGAPTPDYDLWSIYNVSMTTGTAQILVSGYGVKLLDWIGRRGEELAITYYSCWECEATTIFTTLHFKLGVGGTVAQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17541; Mature: 17541
Theoretical pI: Translated: 6.78; Mature: 6.78
Prosite motif: PS00216 SUGAR_TRANSPORT_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMKGRTQPHGTMMRRKLLLVSLLVILAAEVLPANVPEGFSWVSIETDQSTMAVVRRALHD CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHH ATITAIREVGVKGGFAIVMTVSREEGAPTPDYDLWSIYNVSMTTGTAQILVSGYGVKLLD HHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCEEEEEEEECCCCEEEEEECCCHHHHH WIGRRGEELAITYYSCWECEATTIFTTLHFKLGVGGTVAQ HHCCCCCEEEEEEEEEECCCCEEEEEEEEEEECCCCCCCC >Mature Secondary Structure MMKGRTQPHGTMMRRKLLLVSLLVILAAEVLPANVPEGFSWVSIETDQSTMAVVRRALHD CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHH ATITAIREVGVKGGFAIVMTVSREEGAPTPDYDLWSIYNVSMTTGTAQILVSGYGVKLLD HHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCEEEEEEEECCCCEEEEEECCCHHHHH WIGRRGEELAITYYSCWECEATTIFTTLHFKLGVGGTVAQ HHCCCCCEEEEEEEEEECCCCEEEEEEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA