| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116625856
Identifier: 116625856
GI number: 116625856
Start: 8539210
End: 8539965
Strand: Reverse
Name: 116625856
Synonym: Acid_6810
Alternate gene names: NA
Gene position: 8539965-8539210 (Counterclockwise)
Preceding gene: 116625857
Following gene: 116625853
Centisome position: 85.69
GC content: 53.7
Gene sequence:
>756_bases ATGAAGATGCGGAATCCTGGCACCATCTCGACAGTGAAAGTTGCCTTCGCGAGGCTGCCAACTGCGAAGCCTGTCAGACA TAGGGAGCCGTGGATCAAAGCCAAGGTAAATCGTCGTGCATACCCGTGGCTCTGGGCAGTCATTGGCGTCCTTCTGAGCT CCGCTCTCTCCACCGCGGAGGCGGGCACGATCCCACCCTTTGTCTCTGCGATGGAAGCTATGCTGGATGCGACGATTGAC GACTATAGCTTTCGGCCAAGGATTTTCGGGCCGTCACTTGACCCGCTGATGTTTGCGAGCCAAGTGGACCCATTGGGCCA GAGTTTTTCAATGGCGACTGTGCCCGGCTCAGTCTACAACGGTCTACCGTTAACGCAGTCGATTACCGGTACGTACAACC AAGCGCTGATGAGGTGGGATTTCATAGGCAGCGGCCAAGTCGGAGGATCTCCTCTCAACCCTAGTGGGTACCTCATTTAC ACTGCCAACGATGCTCAGGAAGGATTTGGCCATTTTTCAGTCCAAACAAGTGGTGGATTTGAGTTCGATATCGAAAGTAG TCACTTTGTCCTATGGTTCGACCCACCAAAGACGGGCGTAAGTCTAGATAGCTTTCAGTATACGATCAATGGCGCACCCG TGAGTCCTCAATTCACCATAACCGATGCTGTCGATAAGAACGAGAAGTTACTATTTGACGGCCCATTCGAGGGTTCCGCG ACTAACGATCCAGTGGGCGGGGCCGGGTGTTCGTGA
Upstream 100 bases:
>100_bases TAGCCGGACAGCAGTGATTCGGTGTATGCTAGCGCAAACGTGGTTCTCAAGAGCGACATCGGCGTCAGAACTCAGTAAGT GTTCGTATTCTTCCTTAAGG
Downstream 100 bases:
>100_bases TTCAGGCTGTGCCCGAATCCAGCAGCCTGAGCTTGTTGGCAATTGGTTTGTTGTCCCTCGTCTGGCGATTTAGATTCTCC ACGGAATGCCATTTGGGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 251; Mature: 251
Protein sequence:
>251_residues MKMRNPGTISTVKVAFARLPTAKPVRHREPWIKAKVNRRAYPWLWAVIGVLLSSALSTAEAGTIPPFVSAMEAMLDATID DYSFRPRIFGPSLDPLMFASQVDPLGQSFSMATVPGSVYNGLPLTQSITGTYNQALMRWDFIGSGQVGGSPLNPSGYLIY TANDAQEGFGHFSVQTSGGFEFDIESSHFVLWFDPPKTGVSLDSFQYTINGAPVSPQFTITDAVDKNEKLLFDGPFEGSA TNDPVGGAGCS
Sequences:
>Translated_251_residues MKMRNPGTISTVKVAFARLPTAKPVRHREPWIKAKVNRRAYPWLWAVIGVLLSSALSTAEAGTIPPFVSAMEAMLDATID DYSFRPRIFGPSLDPLMFASQVDPLGQSFSMATVPGSVYNGLPLTQSITGTYNQALMRWDFIGSGQVGGSPLNPSGYLIY TANDAQEGFGHFSVQTSGGFEFDIESSHFVLWFDPPKTGVSLDSFQYTINGAPVSPQFTITDAVDKNEKLLFDGPFEGSA TNDPVGGAGCS >Mature_251_residues MKMRNPGTISTVKVAFARLPTAKPVRHREPWIKAKVNRRAYPWLWAVIGVLLSSALSTAEAGTIPPFVSAMEAMLDATID DYSFRPRIFGPSLDPLMFASQVDPLGQSFSMATVPGSVYNGLPLTQSITGTYNQALMRWDFIGSGQVGGSPLNPSGYLIY TANDAQEGFGHFSVQTSGGFEFDIESSHFVLWFDPPKTGVSLDSFQYTINGAPVSPQFTITDAVDKNEKLLFDGPFEGSA TNDPVGGAGCS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27072; Mature: 27072
Theoretical pI: Translated: 4.97; Mature: 4.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKMRNPGTISTVKVAFARLPTAKPVRHREPWIKAKVNRRAYPWLWAVIGVLLSSALSTAE CCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHC AGTIPPFVSAMEAMLDATIDDYSFRPRIFGPSLDPLMFASQVDPLGQSFSMATVPGSVYN CCCCCHHHHHHHHHHHCCCCCCCCCCEEECCCCCHHHHHHHCCCCCCCCEEEECCCHHHC GLPLTQSITGTYNQALMRWDFIGSGQVGGSPLNPSGYLIYTANDAQEGFGHFSVQTSGGF CCCCCHHHCCHHHHHHEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEEECCCE EFDIESSHFVLWFDPPKTGVSLDSFQYTINGAPVSPQFTITDAVDKNEKLLFDGPFEGSA EEEECCCEEEEEECCCCCCCEECCEEEEECCCCCCCCEEEEECCCCCCEEEEECCCCCCC TNDPVGGAGCS CCCCCCCCCCC >Mature Secondary Structure MKMRNPGTISTVKVAFARLPTAKPVRHREPWIKAKVNRRAYPWLWAVIGVLLSSALSTAE CCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHC AGTIPPFVSAMEAMLDATIDDYSFRPRIFGPSLDPLMFASQVDPLGQSFSMATVPGSVYN CCCCCHHHHHHHHHHHCCCCCCCCCCEEECCCCCHHHHHHHCCCCCCCCEEEECCCHHHC GLPLTQSITGTYNQALMRWDFIGSGQVGGSPLNPSGYLIYTANDAQEGFGHFSVQTSGGF CCCCCHHHCCHHHHHHEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEEECCCE EFDIESSHFVLWFDPPKTGVSLDSFQYTINGAPVSPQFTITDAVDKNEKLLFDGPFEGSA EEEECCCEEEEEECCCCCCCEECCEEEEECCCCCCCCEEEEECCCCCCEEEEECCCCCCC TNDPVGGAGCS CCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA