| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116625848
Identifier: 116625848
GI number: 116625848
Start: 8532668
End: 8533927
Strand: Direct
Name: 116625848
Synonym: Acid_6802
Alternate gene names: NA
Gene position: 8532668-8533927 (Clockwise)
Preceding gene: 116625843
Following gene: 116625854
Centisome position: 85.62
GC content: 58.02
Gene sequence:
>1260_bases ATGCAAATACGACCAACGCTCAGAGTGCTTCAATCCACGGCACACATTGCCATTTGCGCAACGACTATCGTCGTGTTGAC AGTGACAGCTCAGGGACAAACGATACCGATCGTCAACGGGAATTTCAACAGCGACGTGCTCGGCTGTGCGGCAGGGCCTT CATGCTTCGACTCTAGCGTGATACCTGGTTGGGTCGGAGGAGGTCCGACGGCGACGTTTAAGCCTTCTACTGGAGTGGGA GGCGAATTTCCCGGCGGTATACCTGGCGGGGGTCCAAATGTCGCCGCAGTTGGGGACCCCAGCGGCGCTGCGACCATCAC CCAAGACCTGGGATTTGCCCCATCGCCCAACACTACCTACACTCTGACTGTCTATGTGGGCCAGCGAGCCGACTTTCCGC TCATTGCATACGCCGTTGAACTTCTGGTGGGAACGACCAGTGTTACCTCCGACACCACACTCACTCCGGCAGCGGGAAGC TTCGCGCTTGATACAGTGACCTACAACTCCGGCAGTTCGCCCAGTGCCGGGCATCTTATGATCCGCCTTAGCGCGAGTGG CGGCGGCCAGGCAGATTTTGCTCAGGTTGTGCTCACCGGTACCTCGGTAGGAACCGTGACAAGAATCCTCCCACAACTTG CGTTCGGTGGCGGCTGGTATACGGCAATGTATTTCACTAACATCAGCGGCGTTCCAGTTTCATTCACTGTCAGCTTCATC GGCAACGACGGCAACCCGCTTACTGTCTCTGCTCTGAGCGGTTCATCCACAACCGTGAATCTCGCCGCGCGCGGTACGGC CATCATAGAAATTCCCAACGTGGGATCGCTCGTGCAAGGATATGTTTCGGCGGCATTGCCTGCCGGAGTCACCGGATACG GCGTCTTCCGTCAGAGCGTCCCGGGCGTGGCGGATCAGGAGGCTGTTGTGCCGCTTTCGGGGACAACCGCGACCACCAGC ACCTTGGAATTTGACGATACGAAATATGTCACGGGCATCGCGGTGGTCAATCTCACCTCGGTGAGCACTGTGATTTCGGT TTTTGTGCGCGACGCCCAAGGCAATACAATCGGGACCTCCAATATTGCGCTTGGACCCCATGCTAAAACAGCCGTGGTGC TGAGAGATCTTCCGGGTCTCGCGGGAGTTTCTGGCGCGCTGGGTTCCGTGGACTTCACCACCAGTATCGGGACGCTCGCG GCCCTCGGGCTTAGGTTCAATGGGGCGGCATTCACGTCTATTCCTACATCGGACCGCTAA
Upstream 100 bases:
>100_bases TACTGGTCGGTAGACACACAATGGTGCCTAGGTTGCTCGACGACGAAGTCGGACGAGCCTGCTATGGTCCGCGCCCATAG AAAGGTATAAGGGATAACAA
Downstream 100 bases:
>100_bases AGAGTGAGTTATTCGCGAGACACCGGCGTCACGCCCGCAGCGCGGATGCCTTCCTTCAACTTTGCCTACCAACTCGCTTA GGTTGTAATGGCACGGCATG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 419; Mature: 419
Protein sequence:
>419_residues MQIRPTLRVLQSTAHIAICATTIVVLTVTAQGQTIPIVNGNFNSDVLGCAAGPSCFDSSVIPGWVGGGPTATFKPSTGVG GEFPGGIPGGGPNVAAVGDPSGAATITQDLGFAPSPNTTYTLTVYVGQRADFPLIAYAVELLVGTTSVTSDTTLTPAAGS FALDTVTYNSGSSPSAGHLMIRLSASGGGQADFAQVVLTGTSVGTVTRILPQLAFGGGWYTAMYFTNISGVPVSFTVSFI GNDGNPLTVSALSGSSTTVNLAARGTAIIEIPNVGSLVQGYVSAALPAGVTGYGVFRQSVPGVADQEAVVPLSGTTATTS TLEFDDTKYVTGIAVVNLTSVSTVISVFVRDAQGNTIGTSNIALGPHAKTAVVLRDLPGLAGVSGALGSVDFTTSIGTLA ALGLRFNGAAFTSIPTSDR
Sequences:
>Translated_419_residues MQIRPTLRVLQSTAHIAICATTIVVLTVTAQGQTIPIVNGNFNSDVLGCAAGPSCFDSSVIPGWVGGGPTATFKPSTGVG GEFPGGIPGGGPNVAAVGDPSGAATITQDLGFAPSPNTTYTLTVYVGQRADFPLIAYAVELLVGTTSVTSDTTLTPAAGS FALDTVTYNSGSSPSAGHLMIRLSASGGGQADFAQVVLTGTSVGTVTRILPQLAFGGGWYTAMYFTNISGVPVSFTVSFI GNDGNPLTVSALSGSSTTVNLAARGTAIIEIPNVGSLVQGYVSAALPAGVTGYGVFRQSVPGVADQEAVVPLSGTTATTS TLEFDDTKYVTGIAVVNLTSVSTVISVFVRDAQGNTIGTSNIALGPHAKTAVVLRDLPGLAGVSGALGSVDFTTSIGTLA ALGLRFNGAAFTSIPTSDR >Mature_419_residues MQIRPTLRVLQSTAHIAICATTIVVLTVTAQGQTIPIVNGNFNSDVLGCAAGPSCFDSSVIPGWVGGGPTATFKPSTGVG GEFPGGIPGGGPNVAAVGDPSGAATITQDLGFAPSPNTTYTLTVYVGQRADFPLIAYAVELLVGTTSVTSDTTLTPAAGS FALDTVTYNSGSSPSAGHLMIRLSASGGGQADFAQVVLTGTSVGTVTRILPQLAFGGGWYTAMYFTNISGVPVSFTVSFI GNDGNPLTVSALSGSSTTVNLAARGTAIIEIPNVGSLVQGYVSAALPAGVTGYGVFRQSVPGVADQEAVVPLSGTTATTS TLEFDDTKYVTGIAVVNLTSVSTVISVFVRDAQGNTIGTSNIALGPHAKTAVVLRDLPGLAGVSGALGSVDFTTSIGTLA ALGLRFNGAAFTSIPTSDR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41893; Mature: 41893
Theoretical pI: Translated: 4.59; Mature: 4.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQIRPTLRVLQSTAHIAICATTIVVLTVTAQGQTIPIVNGNFNSDVLGCAAGPSCFDSSV CCCCHHHHHHHHCCCEEEEEEEEEEEEEECCCCEEEEECCCCCCCEEEECCCCCCCCCCC IPGWVGGGPTATFKPSTGVGGEFPGGIPGGGPNVAAVGDPSGAATITQDLGFAPSPNTTY CCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCEEEECCCCCCEEEHHHCCCCCCCCCEE TLTVYVGQRADFPLIAYAVELLVGTTSVTSDTTLTPAAGSFALDTVTYNSGSSPSAGHLM EEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCEECCCCCCEEEEEEEECCCCCCCCCEEE IRLSASGGGQADFAQVVLTGTSVGTVTRILPQLAFGGGWYTAMYFTNISGVPVSFTVSFI EEEECCCCCCCCEEEEEEECCCHHHHHHHHHHHHCCCCEEEEEEEECCCCCCEEEEEEEE GNDGNPLTVSALSGSSTTVNLAARGTAIIEIPNVGSLVQGYVSAALPAGVTGYGVFRQSV ECCCCEEEEEEECCCCEEEEEEECCEEEEEECCCHHHHHHHHHHHCCCCCCCHHHHHHCC PGVADQEAVVPLSGTTATTSTLEFDDTKYVTGIAVVNLTSVSTVISVFVRDAQGNTIGTS CCCCCCCEEEEECCCCCEEEEEEECCCEEEEEEEEEEEHHHHHHHHHHEECCCCCEECCC NIALGPHAKTAVVLRDLPGLAGVSGALGSVDFTTSIGTLAALGLRFNGAAFTSIPTSDR CEEECCCCCEEEEEECCCCCCCCCCCCCCEEEHHHHHHHHHEEEEECCEEEECCCCCCC >Mature Secondary Structure MQIRPTLRVLQSTAHIAICATTIVVLTVTAQGQTIPIVNGNFNSDVLGCAAGPSCFDSSV CCCCHHHHHHHHCCCEEEEEEEEEEEEEECCCCEEEEECCCCCCCEEEECCCCCCCCCCC IPGWVGGGPTATFKPSTGVGGEFPGGIPGGGPNVAAVGDPSGAATITQDLGFAPSPNTTY CCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCEEEECCCCCCEEEHHHCCCCCCCCCEE TLTVYVGQRADFPLIAYAVELLVGTTSVTSDTTLTPAAGSFALDTVTYNSGSSPSAGHLM EEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCEECCCCCCEEEEEEEECCCCCCCCCEEE IRLSASGGGQADFAQVVLTGTSVGTVTRILPQLAFGGGWYTAMYFTNISGVPVSFTVSFI EEEECCCCCCCCEEEEEEECCCHHHHHHHHHHHHCCCCEEEEEEEECCCCCCEEEEEEEE GNDGNPLTVSALSGSSTTVNLAARGTAIIEIPNVGSLVQGYVSAALPAGVTGYGVFRQSV ECCCCEEEEEEECCCCEEEEEEECCEEEEEECCCHHHHHHHHHHHCCCCCCCHHHHHHCC PGVADQEAVVPLSGTTATTSTLEFDDTKYVTGIAVVNLTSVSTVISVFVRDAQGNTIGTS CCCCCCCEEEEECCCCCEEEEEEECCCEEEEEEEEEEEHHHHHHHHHHEECCCCCEECCC NIALGPHAKTAVVLRDLPGLAGVSGALGSVDFTTSIGTLAALGLRFNGAAFTSIPTSDR CEEECCCCCEEEEEECCCCCCCCCCCCCCEEEHHHHHHHHHEEEEECCEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA