| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116625831
Identifier: 116625831
GI number: 116625831
Start: 8506812
End: 8508950
Strand: Reverse
Name: 116625831
Synonym: Acid_6784
Alternate gene names: NA
Gene position: 8508950-8506812 (Counterclockwise)
Preceding gene: 116625836
Following gene: 116625830
Centisome position: 85.38
GC content: 60.26
Gene sequence:
>2139_bases ATGTGGACCAAAGATTCAGGGCCCGGCGAGGTCAAGTTCGCCGATGCGAAGGCGCTGATCACCACCGCGACGTTCTCCGC GCCGAGGGCGTATGTACTGCGGCTGACGGTGGACAAAGAGCAATCCAAGGACTCGTCCACGTTGAGCGTATCGGTGGAGA CACCGCCGCCGGCGAAGCAACTCGACGCGGTCTACACCAAGAACTTCAAAATCACTAGCCCTTTGTGGAACGCGCGCGCC AAGGCCCTGATAGTGAGCTGGATTCCGCACTGCATCGACCAGATCAACCGTACCGACCTGACGCAGGATCCGGGCGGGAT CGATAATTTCGTGGAGGCTGGGAAAGCCCTGCGTGGCGAGCCGCACGGCGCACACAAGGGATATGTCTTCTCCAACGCCT GGGTCCACCAGACGGTGGAGGCGATGAGCATCGCGCTGATGATCGACCCGCAAGGGGACGCGGAGATCATCAAGGCGCAC GAAAAAATGCGGGCCACGCTGGAAGACTGGATTCCCAAGATTCTGGCCGCGCAGGAAGCGGACGGATATCTGCAAACGGC ATTCAGCCTACCGCGGGTAGATGTGCGAGGCAAGATCGACCCCGGTCCGTTTGCCCACTGGGAACGGCGCGGCGATCACG AGGGATACACCGGGGGCTACTTTTTGGAATCGGCCATCAACCACTACCAGATGACCAATAGGAAGGACGCCAGCCTGTAC AACGCGGCGAAGAAGCTGGCGGAGTGCTGGTGTGCCAACCTGGGGCCGGCGCCCAAGAAGGCGTGGTACGACGGCCACCA GGAGATGGAACAGGCGCTCGTCCGGTTTGGCCGTTTCGTTAACGATATGGAGGGCGGCGGCAAGGGCACGAAGTACGTCG GACTCGCGAAGTTTCTGCTGGATTGCCGCTACAACGCGGCGCGCAACGATCGCGAACGCACCGAATACGATCAGAGTCAC TTGCCGGTGACGCAGCAGTACGAGGCGGTGGGACACGCCGTGCGCGCGAGGTACAACTACTCGGGAATGGCGGACGTCGC GGTGGAAACGCACGACCCCGATTACCAGAGCGCGGTGAAATCGCTGTGGGACAACATGGTTAATAAGAAGTACTATGTGA CCGGCGGCGTGGGCAGCGGTGAGACGTCGGAGGGTTTCGGTCCGAACTATTCATTGAGGAATCGCGCCTATTGCGAATCG TGTTCCAGTTGCGGCGCGATTTTCTTCCAATGGAAGATGAACCTGGCGTACCACGACGCGAAGTACGCCGACCTGTACGA AGAGACGATGTACAACGCGCTATTGGGCAGCACGGACCTGGCAGCCAAGGTCTTCTATTACACCAACCCGCTGGATGCCA ACGTCGGGCGGGCACCGTGGCACACCTGCCCGTGCTGTGTCGGCAACATCCCGCGAACCTTGCTGATGATGCCGACCTGG ACGTATGCCAAGAGCGCGGACGGCGTCTACGTCAACCTCTTCGTGGGCAGCACGATCACGCTCGAGAACGTGGCCGGGAC GGATGTCGAGATGGTGCAGGCCACCGACTATCCCTGGAGCGCCAAACTCGCACTTACGGTAAACCCAAAGACGCCGAAGA ATTTCAGCGTGCGGATCCGGGTTTCGAACCGCGCCGTAAGCAAGCTTTACCGGAGCACCCCAGACGCCAACGGTATTACT TCGATTGCGGTGAATGGCCAGCCGGTGAAGCCGCTGATCGAAAAGGGGTATGCCGTCATTACGCGCGCGTGGAAGACGGG CGATAAAGTGGATGTGGTGCTGCCAATGAAGGTACAACGGGTACGCGCCAACGAGAGAATCGCGGACAACAATCACAAGG TGGCGTTGCGCTACGGTCCGCTGATTTACAACATCGAGCAGGTGGACCAGCCCATCGACAAGGTCCTGAGCACCGAGTCT CCTCTGACAACGGAGTGGAGGAGCGATCTTCTGGGTGGGGTCATGGTGATCAGAGGCAAGTTCGCCGACGGCAGCCCGAT GACGGCGATTCCGAATTACGCACGGACCAACCGAGATAAGGAACTGCCACTGGAAGGATCGCTGCCGCTGGGAGCCGATG GGGCGGTGCGCCCGGCTCAGCATCCGCCGACATCGGTAGTCTGGTTTCGGGAAGGTTGA
Upstream 100 bases:
>100_bases TGCGCGGATGGGCCGGGTATGGCGATCCGCCACGGTCCAACCAGAATCGCGGACGGCAGGACACACCGCCGGCGCCGCCG ACCGGGCCGATGCCACCGCA
Downstream 100 bases:
>100_bases CGATATGGAGCTCAGCCGTCGTCGATTCGGTGCGCTCCTGGCCACTACCGGCCCGGCCGCGGCGGCGTTGACCGCCCAAC AGAACCCAACAGCTGCGGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 712; Mature: 712
Protein sequence:
>712_residues MWTKDSGPGEVKFADAKALITTATFSAPRAYVLRLTVDKEQSKDSSTLSVSVETPPPAKQLDAVYTKNFKITSPLWNARA KALIVSWIPHCIDQINRTDLTQDPGGIDNFVEAGKALRGEPHGAHKGYVFSNAWVHQTVEAMSIALMIDPQGDAEIIKAH EKMRATLEDWIPKILAAQEADGYLQTAFSLPRVDVRGKIDPGPFAHWERRGDHEGYTGGYFLESAINHYQMTNRKDASLY NAAKKLAECWCANLGPAPKKAWYDGHQEMEQALVRFGRFVNDMEGGGKGTKYVGLAKFLLDCRYNAARNDRERTEYDQSH LPVTQQYEAVGHAVRARYNYSGMADVAVETHDPDYQSAVKSLWDNMVNKKYYVTGGVGSGETSEGFGPNYSLRNRAYCES CSSCGAIFFQWKMNLAYHDAKYADLYEETMYNALLGSTDLAAKVFYYTNPLDANVGRAPWHTCPCCVGNIPRTLLMMPTW TYAKSADGVYVNLFVGSTITLENVAGTDVEMVQATDYPWSAKLALTVNPKTPKNFSVRIRVSNRAVSKLYRSTPDANGIT SIAVNGQPVKPLIEKGYAVITRAWKTGDKVDVVLPMKVQRVRANERIADNNHKVALRYGPLIYNIEQVDQPIDKVLSTES PLTTEWRSDLLGGVMVIRGKFADGSPMTAIPNYARTNRDKELPLEGSLPLGADGAVRPAQHPPTSVVWFREG
Sequences:
>Translated_712_residues MWTKDSGPGEVKFADAKALITTATFSAPRAYVLRLTVDKEQSKDSSTLSVSVETPPPAKQLDAVYTKNFKITSPLWNARA KALIVSWIPHCIDQINRTDLTQDPGGIDNFVEAGKALRGEPHGAHKGYVFSNAWVHQTVEAMSIALMIDPQGDAEIIKAH EKMRATLEDWIPKILAAQEADGYLQTAFSLPRVDVRGKIDPGPFAHWERRGDHEGYTGGYFLESAINHYQMTNRKDASLY NAAKKLAECWCANLGPAPKKAWYDGHQEMEQALVRFGRFVNDMEGGGKGTKYVGLAKFLLDCRYNAARNDRERTEYDQSH LPVTQQYEAVGHAVRARYNYSGMADVAVETHDPDYQSAVKSLWDNMVNKKYYVTGGVGSGETSEGFGPNYSLRNRAYCES CSSCGAIFFQWKMNLAYHDAKYADLYEETMYNALLGSTDLAAKVFYYTNPLDANVGRAPWHTCPCCVGNIPRTLLMMPTW TYAKSADGVYVNLFVGSTITLENVAGTDVEMVQATDYPWSAKLALTVNPKTPKNFSVRIRVSNRAVSKLYRSTPDANGIT SIAVNGQPVKPLIEKGYAVITRAWKTGDKVDVVLPMKVQRVRANERIADNNHKVALRYGPLIYNIEQVDQPIDKVLSTES PLTTEWRSDLLGGVMVIRGKFADGSPMTAIPNYARTNRDKELPLEGSLPLGADGAVRPAQHPPTSVVWFREG >Mature_712_residues MWTKDSGPGEVKFADAKALITTATFSAPRAYVLRLTVDKEQSKDSSTLSVSVETPPPAKQLDAVYTKNFKITSPLWNARA KALIVSWIPHCIDQINRTDLTQDPGGIDNFVEAGKALRGEPHGAHKGYVFSNAWVHQTVEAMSIALMIDPQGDAEIIKAH EKMRATLEDWIPKILAAQEADGYLQTAFSLPRVDVRGKIDPGPFAHWERRGDHEGYTGGYFLESAINHYQMTNRKDASLY NAAKKLAECWCANLGPAPKKAWYDGHQEMEQALVRFGRFVNDMEGGGKGTKYVGLAKFLLDCRYNAARNDRERTEYDQSH LPVTQQYEAVGHAVRARYNYSGMADVAVETHDPDYQSAVKSLWDNMVNKKYYVTGGVGSGETSEGFGPNYSLRNRAYCES CSSCGAIFFQWKMNLAYHDAKYADLYEETMYNALLGSTDLAAKVFYYTNPLDANVGRAPWHTCPCCVGNIPRTLLMMPTW TYAKSADGVYVNLFVGSTITLENVAGTDVEMVQATDYPWSAKLALTVNPKTPKNFSVRIRVSNRAVSKLYRSTPDANGIT SIAVNGQPVKPLIEKGYAVITRAWKTGDKVDVVLPMKVQRVRANERIADNNHKVALRYGPLIYNIEQVDQPIDKVLSTES PLTTEWRSDLLGGVMVIRGKFADGSPMTAIPNYARTNRDKELPLEGSLPLGADGAVRPAQHPPTSVVWFREG
Specific function: Unknown
COG id: COG3533
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 79030; Mature: 79030
Theoretical pI: Translated: 7.93; Mature: 7.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWTKDSGPGEVKFADAKALITTATFSAPRAYVLRLTVDKEQSKDSSTLSVSVETPPPAKQ CCCCCCCCCEEEEECCCEEEEEEECCCCCEEEEEEEECCCCCCCCCEEEEEECCCCCHHH LDAVYTKNFKITSPLWNARAKALIVSWIPHCIDQINRTDLTQDPGGIDNFVEAGKALRGE HHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCC PHGAHKGYVFSNAWVHQTVEAMSIALMIDPQGDAEIIKAHEKMRATLEDWIPKILAAQEA CCCCCCCEEEECHHHHHHHHHEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC DGYLQTAFSLPRVDVRGKIDPGPFAHWERRGDHEGYTGGYFLESAINHYQMTNRKDASLY CCHHHHHHCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHH NAAKKLAECWCANLGPAPKKAWYDGHQEMEQALVRFGRFVNDMEGGGKGTKYVGLAKFLL HHHHHHHHHHHCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH DCRYNAARNDRERTEYDQSHLPVTQQYEAVGHAVRARYNYSGMADVAVETHDPDYQSAVK HHCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHH SLWDNMVNKKYYVTGGVGSGETSEGFGPNYSLRNRAYCESCSSCGAIFFQWKMNLAYHDA HHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEEEEEECEEECCC KYADLYEETMYNALLGSTDLAAKVFYYTNPLDANVGRAPWHTCPCCVGNIPRTLLMMPTW HHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHCCCCCEEEEECCC TYAKSADGVYVNLFVGSTITLENVAGTDVEMVQATDYPWSAKLALTVNPKTPKNFSVRIR CCCCCCCCEEEEEEECCEEEECCCCCCCEEEEEECCCCCCEEEEEEECCCCCCCEEEEEE VSNRAVSKLYRSTPDANGITSIAVNGQPVKPLIEKGYAVITRAWKTGDKVDVVLPMKVQR ECCHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHCCEEEEEEHHCCCCEEEEEECCHHHH VRANERIADNNHKVALRYGPLIYNIEQVDQPIDKVLSTESPLTTEWRSDLLGGVMVIRGK HHCCCCCCCCCCEEEEEECCEEEEHHHHHHHHHHHHCCCCCCCHHHHHHHHCCEEEEEEE FADGSPMTAIPNYARTNRDKELPLEGSLPLGADGAVRPAQHPPTSVVWFREG CCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECC >Mature Secondary Structure MWTKDSGPGEVKFADAKALITTATFSAPRAYVLRLTVDKEQSKDSSTLSVSVETPPPAKQ CCCCCCCCCEEEEECCCEEEEEEECCCCCEEEEEEEECCCCCCCCCEEEEEECCCCCHHH LDAVYTKNFKITSPLWNARAKALIVSWIPHCIDQINRTDLTQDPGGIDNFVEAGKALRGE HHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCC PHGAHKGYVFSNAWVHQTVEAMSIALMIDPQGDAEIIKAHEKMRATLEDWIPKILAAQEA CCCCCCCEEEECHHHHHHHHHEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC DGYLQTAFSLPRVDVRGKIDPGPFAHWERRGDHEGYTGGYFLESAINHYQMTNRKDASLY CCHHHHHHCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHH NAAKKLAECWCANLGPAPKKAWYDGHQEMEQALVRFGRFVNDMEGGGKGTKYVGLAKFLL HHHHHHHHHHHCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH DCRYNAARNDRERTEYDQSHLPVTQQYEAVGHAVRARYNYSGMADVAVETHDPDYQSAVK HHCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHH SLWDNMVNKKYYVTGGVGSGETSEGFGPNYSLRNRAYCESCSSCGAIFFQWKMNLAYHDA HHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEEEEEECEEECCC KYADLYEETMYNALLGSTDLAAKVFYYTNPLDANVGRAPWHTCPCCVGNIPRTLLMMPTW HHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHCCCCCEEEEECCC TYAKSADGVYVNLFVGSTITLENVAGTDVEMVQATDYPWSAKLALTVNPKTPKNFSVRIR CCCCCCCCEEEEEEECCEEEECCCCCCCEEEEEECCCCCCEEEEEEECCCCCCCEEEEEE VSNRAVSKLYRSTPDANGITSIAVNGQPVKPLIEKGYAVITRAWKTGDKVDVVLPMKVQR ECCHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHCCEEEEEEHHCCCCEEEEEECCHHHH VRANERIADNNHKVALRYGPLIYNIEQVDQPIDKVLSTESPLTTEWRSDLLGGVMVIRGK HHCCCCCCCCCCEEEEEECCEEEEHHHHHHHHHHHHCCCCCCCHHHHHHHHCCEEEEEEE FADGSPMTAIPNYARTNRDKELPLEGSLPLGADGAVRPAQHPPTSVVWFREG CCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA