| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
Click here to switch to the map view.
The map label for this gene is 116625820
Identifier: 116625820
GI number: 116625820
Start: 8491171
End: 8492127
Strand: Direct
Name: 116625820
Synonym: Acid_6771
Alternate gene names: NA
Gene position: 8491171-8492127 (Clockwise)
Preceding gene: 116625819
Following gene: 116625825
Centisome position: 85.2
GC content: 57.68
Gene sequence:
>957_bases ATGAAGCCAACGATTCGCAATTCCAGTTGCCTGACGTTAGCAGCGGCCTGCGCCGGGGCATTCTTTATTGCGCCCGCTGC CAAGGCCCAATTGTTCTCTTGGACCAAGGAGGAGATGGTGGAATACACCAAGGCCTGGACGGGGGAGCGTTTTCCCGACG GGAGGCCCAGGGTTCCGGACGATTGGCTCCAACGCGCGAAGGGGATGTCTCAGGAAGAAGTGCTCATCCCGCTGGGGCGC AATGCCGGCCCACCGAATGTTTCCAGCTTCAGTCAGTACGATGCCAATTTCAAGGTCTTGCATCCGGATATCAAGATGGC AGGCCGCGTGGTCACCGCAATGTACATGCCGATCCGTGCCGACATCGACACGATTCTTTTTGCCAAGGCTCGGGAAAAGG GCGTTGCCTTGAACAACCAATGGCCGCTCGATCAACTGCAAACCGGCGACGTCATGGTAATCGATATGTTTGGAAAGGTG GAGGGCGGCGGGCTGATCGGCGACAACCTCTTCTACTACATCATGAAGGCGACCAAGGGCGGCGGCCTGGTGGTCAACGG GGCGATTCGCGACCTGGAGGGTGTCAGTGAGATTAAGCTGCCTGCATACGTTCGCGACTTCACCCCGACGTACTACGGCG GCTCGACCCTTTACGGTTACAACGTGCCGGTGCGCATAGGCAATGTGGTGGTGATGCCTGGCGACATCGCGTTTGGCGAT AAGGAGGGCGTGTCTTTCATCCCGCCGTCGATCGCCGAGCGCATCCTGGATCGAGCGGACGAAACCCACATCCACGATGA GTGGACGAAGATAAAGTTCGACGAGGGCAAATACAAGTCGACCGATATCTACTCCGTGCCGAAGACGGATGCGTTGCGCA AGGAATACCAGGAATACCTCAAGAAGAAGTTGGATGAACTGAAGGCCACGCGCGCCGCTGCGGCCGCCAAAAAGTAA
Upstream 100 bases:
>100_bases GATTGTCGGACAGGAAACTCAAAAATGAAGAGTCCGGAAAACGTGGTTGATTGTAGAATAGGGACTGCGTCCCGACCGAT CCGGTGGAAAGGTGGCCTCG
Downstream 100 bases:
>100_bases TACCCTAGATTCTGCCGAATTTGGAGACGGCTTCCTTGATTGACCGGAACTTCTCGATAAACGGAATGGTCGAGTGCTCC GTATTGTCGAGTTCCTGGGC
Product: demethylmenaquinone methyltransferase-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 318; Mature: 318
Protein sequence:
>318_residues MKPTIRNSSCLTLAAACAGAFFIAPAAKAQLFSWTKEEMVEYTKAWTGERFPDGRPRVPDDWLQRAKGMSQEEVLIPLGR NAGPPNVSSFSQYDANFKVLHPDIKMAGRVVTAMYMPIRADIDTILFAKAREKGVALNNQWPLDQLQTGDVMVIDMFGKV EGGGLIGDNLFYYIMKATKGGGLVVNGAIRDLEGVSEIKLPAYVRDFTPTYYGGSTLYGYNVPVRIGNVVVMPGDIAFGD KEGVSFIPPSIAERILDRADETHIHDEWTKIKFDEGKYKSTDIYSVPKTDALRKEYQEYLKKKLDELKATRAAAAAKK
Sequences:
>Translated_318_residues MKPTIRNSSCLTLAAACAGAFFIAPAAKAQLFSWTKEEMVEYTKAWTGERFPDGRPRVPDDWLQRAKGMSQEEVLIPLGR NAGPPNVSSFSQYDANFKVLHPDIKMAGRVVTAMYMPIRADIDTILFAKAREKGVALNNQWPLDQLQTGDVMVIDMFGKV EGGGLIGDNLFYYIMKATKGGGLVVNGAIRDLEGVSEIKLPAYVRDFTPTYYGGSTLYGYNVPVRIGNVVVMPGDIAFGD KEGVSFIPPSIAERILDRADETHIHDEWTKIKFDEGKYKSTDIYSVPKTDALRKEYQEYLKKKLDELKATRAAAAAKK >Mature_318_residues MKPTIRNSSCLTLAAACAGAFFIAPAAKAQLFSWTKEEMVEYTKAWTGERFPDGRPRVPDDWLQRAKGMSQEEVLIPLGR NAGPPNVSSFSQYDANFKVLHPDIKMAGRVVTAMYMPIRADIDTILFAKAREKGVALNNQWPLDQLQTGDVMVIDMFGKV EGGGLIGDNLFYYIMKATKGGGLVVNGAIRDLEGVSEIKLPAYVRDFTPTYYGGSTLYGYNVPVRIGNVVVMPGDIAFGD KEGVSFIPPSIAERILDRADETHIHDEWTKIKFDEGKYKSTDIYSVPKTDALRKEYQEYLKKKLDELKATRAAAAAKK
Specific function: Unknown
COG id: COG0684
COG function: function code H; Demethylmenaquinone methyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the RraA family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005493 [H]
Pfam domain/function: PF03737 Methyltransf_6 [H]
EC number: NA
Molecular weight: Translated: 35278; Mature: 35278
Theoretical pI: Translated: 8.54; Mature: 8.54
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPTIRNSSCLTLAAACAGAFFIAPAAKAQLFSWTKEEMVEYTKAWTGERFPDGRPRVPD CCCCCCCCCHHHHHHHHHHHHEECCCHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCH DWLQRAKGMSQEEVLIPLGRNAGPPNVSSFSQYDANFKVLHPDIKMAGRVVTAMYMPIRA HHHHHHCCCCCCEEEEEECCCCCCCCCCCHHHCCCCEEEECCCHHHHHHHHHHHHHHHHC DIDTILFAKAREKGVALNNQWPLDQLQTGDVMVIDMFGKVEGGGLIGDNLFYYIMKATKG CHHHHHHHHHHHCCCEECCCCCHHHHCCCCEEEEEECCCCCCCCEECCCEEEEEEEECCC GGLVVNGAIRDLEGVSEIKLPAYVRDFTPTYYGGSTLYGYNVPVRIGNVVVMPGDIAFGD CCEEEECCHHCCCCHHHCCCCHHHHHCCCCCCCCCEEEEECCCEEECCEEEECCCEECCC KEGVSFIPPSIAERILDRADETHIHDEWTKIKFDEGKYKSTDIYSVPKTDALRKEYQEYL CCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCEEECCCHHHHHHHHHHHH KKKLDELKATRAAAAAKK HHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKPTIRNSSCLTLAAACAGAFFIAPAAKAQLFSWTKEEMVEYTKAWTGERFPDGRPRVPD CCCCCCCCCHHHHHHHHHHHHEECCCHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCH DWLQRAKGMSQEEVLIPLGRNAGPPNVSSFSQYDANFKVLHPDIKMAGRVVTAMYMPIRA HHHHHHCCCCCCEEEEEECCCCCCCCCCCHHHCCCCEEEECCCHHHHHHHHHHHHHHHHC DIDTILFAKAREKGVALNNQWPLDQLQTGDVMVIDMFGKVEGGGLIGDNLFYYIMKATKG CHHHHHHHHHHHCCCEECCCCCHHHHCCCCEEEEEECCCCCCCCEECCCEEEEEEEECCC GGLVVNGAIRDLEGVSEIKLPAYVRDFTPTYYGGSTLYGYNVPVRIGNVVVMPGDIAFGD CCEEEECCHHCCCCHHHCCCCHHHHHCCCCCCCCCEEEEECCCEEECCEEEECCCEECCC KEGVSFIPPSIAERILDRADETHIHDEWTKIKFDEGKYKSTDIYSVPKTDALRKEYQEYL CCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCEEECCCHHHHHHHHHHHH KKKLDELKATRAAAAAKK HHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11058132 [H]