| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116625819
Identifier: 116625819
GI number: 116625819
Start: 8488732
End: 8490981
Strand: Direct
Name: 116625819
Synonym: Acid_6770
Alternate gene names: NA
Gene position: 8488732-8490981 (Clockwise)
Preceding gene: 116625814
Following gene: 116625820
Centisome position: 85.18
GC content: 63.51
Gene sequence:
>2250_bases ATGGCCAAGCACCGAAAGTCGCGCGACACGTCACCACCAGCCGCTGTCACGGGCTCCGTGGCAGCGGGACGGACGTGGTG GAGGCACTGGCGGCTGCTGGCGATTTGTAGCCTTGTCCTGGCCGCTTATTCGAATTCCTTCCAGGGCGCCCTGGTGTTCG ACAACGCTTCGGTGATAGGGCAGGATCCCCGTATTCGGCAGGCTACGCATGAAAGCATCGAGTCCATCCTGACGGGAGGG TATGCTTACGTCAATGCCGCCACCGGCCTGTATCGGCCATTCACCACTCTTTCCTACCTGCTGAATTACGCTGTTCTCGG CGGCGGCCCGCGCCCGGTTGGCTATCACTGGGTCAATCTCGTGCTGCACGAAGTGAACCTTGCGCTGGTGTATGCGTTGG GCATGCTGATCTTTGGAGAAACGGCGCCCGCTTTGGCTCTGGCCGCGATTTGGGGATTGCACCCGCTGCTCACCGAATCG GTCACCAATATCGTGGGGCGCGCCGATTTGCTGGCAGCCCTCGGCGTATTGGCGGGCTTGCTCTGCCATGTGAGAGGCGC CTCCGCCGCCGGGCGGCGCGGGACGGCATGGCTGGCGGGACTGGCCGCCGCCCAGACGGTCGCGCTTTTCTCGAAGGAGA GCGGCGTCGTCTTGCCGGGCCTCATGCTGCTCTACGACTTGACGTGGCGGGATCGGACTATGTGGCGCCGGTGTGCGGCA TCGTATGTCGCTGTGGCGATCCCGTTTGCCGTCTTCTTCTCTTTGCGCGGCGCTCTCGGCATGCACATGCTGATCGACCA AGCCGAGAATCCCCTGGTGAGCACGGGTTTCTTTACAGCGCGCCTGACCGCCGTCAAAGTGGTTGGCAAGCTCCTGTGGC TGTTTCTCTGGCCGGCCCGTTTATCGGCGGACTATTCCTACAATGCCGTGCCGTTATTCGGCTGGCGGCTCACCAACTGG GAGGATGCCAAGGCGCTCATCGCGCTGGCGCTCTTGCTGGGCGCGGCGCTGCTTGCCCTCCTGTTGGCCGTGCGCTGGCG CCGTACGGGGAAGCCAATACTGTTCTTTCTCGTGTTCTTTTTCGTTGCGCTGTCGCCCACTTCGAATCTCGTTGTCCTAA TCGGCAGCATCATGGCCGAGCGGTTTCTCTATCTGCCTTCGGTGGGACTGGCCGGTTGTATCGTCGCGGCCGCCTATGTA CTGGGCCGGCGGCGCTCGCTTCAGCAGCGTGCGGTAGCACCGGTTGGCTGGGTCGCGCTGGGGTTGGTGTGCCTGGCATT CACCGCGCGAACCTACGCCCGCAACTTAGACTGGCAGGATGGCATGAGTCTCTGGACCAGCGCCGTGGAAGTCTGTCCGG GGAGTGCCAGGCCGCACTTTAATCTGGCCAAAGAATTAGAGGCCATACCGGGCCGCCTGTCGGAGGCCATTGCCGAGTAC CGGGAAGCGGTGCGGATCGACCCGGACCGGGCCGATGCCCACGATAACCTGGGAAACGCACTATCAGGCATCCCTGGCCG CCTGACGGAAGCCGTGGCTGAGTTCCGGGAAGCCGTGCGCCTCCAGTCCGATCGAGCGGAAGCCCACAACGACCTGGCGA ATGCCTTGGCGCGCAAACCTGACGGCCTGCCGGAGACCATTGGCGAATACCGGGCGGCGCTGCGCATTGAACCTCGAAAC GCGGAAGTGCATTACAACCTGGCGAACGCCCTTGTACGCATGCCCGACAAACTGCCGGAAGCGATTACCGAATACCAGGC GGCCCTGCGGATTCAACCCGATCATGCGGATGCTCACAATAACCTGGGGGAAGCGCTATCCGGCATACCCGGCAGGCTGC CCGAGGCCATCGCCGAATACAGGGCGGCACTGCGGATTCAACCCGATCTGGTGGCGGCCCACAACAATCTGGGAAACGCC CTCTCGGGCATGCCCGGCCGAATGCCTGAGGCCATCGCCGAATACCATGCGGCACTGCGGATTCAACCCGAGCGGGCGGA AACGCACTACAACCTGGGAAACGCCCTGGCAGGTATGCCCGGCCGGCTGCCCGACGCCATTGCCGAGTTCAAAGCCGCTG TGCGAAGCGAGCCCGATTTCGTCGAAGCGCACGTCAGCCTGGGGAAGGCATTCGCGCTGACGCCCGAACGCCGCGCGGAC GCCATTGCGGAGTATGAAGCGGCCCTGCGAATCAGGCCCGATCCCGAGGTGCGCCGAACCCTGGAGAGATTGCGAGCGAG TTTGCAGTAA
Upstream 100 bases:
>100_bases ATGGACGATGCGGCCAGTGTCGCGCACGGTCGAGACATCCGCGCCGGCGGAGCACACGATCTTTCCGTAAGCGCTATACT GGCGCGTTGAGTTAGGCAAG
Downstream 100 bases:
>100_bases GCAACGCCTTCTGAACGTCAAAATTGCACGCAGATGCGGAGAGAGTTTCCGCAGCCGTGGCGATCGGTGTTTGAGCGCCG GCATATCACGATTGTCGGAC
Product: hypothetical protein
Products: NA
Alternate protein names: Tetratricopeptide TPR_2 Repeat Protein; Tetratricopeptide Repeat Domain Protein; TPR Domain-Containing Protein; Tetratricopeptide Repeat Family; Tetratricopeptide Repeat-Containing Protein; Tetratricopeptide TPR_1 Repeat-Containing Protein; Peptidase; TPR Repeat Protein; Sulfotransferase; TPR Domain Protein; Methyltransferase Type; TPR Repeat; O-Linked N-Acetylglucosamine Transferase; Glycosyl Transferase Family Protein; Tetratricopeptide Protein; Tetratricopeptide Tpr_2 Repeat Protein; TPR Repeat-Containing ; O-GlcNAc Transferase; Porphyrin Biosynthesis Protein; Polypeptide N-Acetylglucosaminyltransferase; Serine/Threonine Protein Kinase With TPR Repeats; Peptidase S1 And S6 Chymotrypsin/Hap; Protein Prenyltransferase Subunit Alpha; Flp Pilus Assembly Protein TadD; Tetratricopeptide Domain-Containing Protein; Tetratricopeptide Repeat Protein; SPY Protein; Pentapeptide Repeat-Containing Serine/Threonine Kinase; TPR Repeat-Containing Methyltransferase; Serine/Threonine Protein Kinase; TPR Repeat-Containing Serine/Threonin Protein Kinase; Protein Kinase; Tetratricopeptide Protein)
Number of amino acids: Translated: 749; Mature: 748
Protein sequence:
>749_residues MAKHRKSRDTSPPAAVTGSVAAGRTWWRHWRLLAICSLVLAAYSNSFQGALVFDNASVIGQDPRIRQATHESIESILTGG YAYVNAATGLYRPFTTLSYLLNYAVLGGGPRPVGYHWVNLVLHEVNLALVYALGMLIFGETAPALALAAIWGLHPLLTES VTNIVGRADLLAALGVLAGLLCHVRGASAAGRRGTAWLAGLAAAQTVALFSKESGVVLPGLMLLYDLTWRDRTMWRRCAA SYVAVAIPFAVFFSLRGALGMHMLIDQAENPLVSTGFFTARLTAVKVVGKLLWLFLWPARLSADYSYNAVPLFGWRLTNW EDAKALIALALLLGAALLALLLAVRWRRTGKPILFFLVFFFVALSPTSNLVVLIGSIMAERFLYLPSVGLAGCIVAAAYV LGRRRSLQQRAVAPVGWVALGLVCLAFTARTYARNLDWQDGMSLWTSAVEVCPGSARPHFNLAKELEAIPGRLSEAIAEY REAVRIDPDRADAHDNLGNALSGIPGRLTEAVAEFREAVRLQSDRAEAHNDLANALARKPDGLPETIGEYRAALRIEPRN AEVHYNLANALVRMPDKLPEAITEYQAALRIQPDHADAHNNLGEALSGIPGRLPEAIAEYRAALRIQPDLVAAHNNLGNA LSGMPGRMPEAIAEYHAALRIQPERAETHYNLGNALAGMPGRLPDAIAEFKAAVRSEPDFVEAHVSLGKAFALTPERRAD AIAEYEAALRIRPDPEVRRTLERLRASLQ
Sequences:
>Translated_749_residues MAKHRKSRDTSPPAAVTGSVAAGRTWWRHWRLLAICSLVLAAYSNSFQGALVFDNASVIGQDPRIRQATHESIESILTGG YAYVNAATGLYRPFTTLSYLLNYAVLGGGPRPVGYHWVNLVLHEVNLALVYALGMLIFGETAPALALAAIWGLHPLLTES VTNIVGRADLLAALGVLAGLLCHVRGASAAGRRGTAWLAGLAAAQTVALFSKESGVVLPGLMLLYDLTWRDRTMWRRCAA SYVAVAIPFAVFFSLRGALGMHMLIDQAENPLVSTGFFTARLTAVKVVGKLLWLFLWPARLSADYSYNAVPLFGWRLTNW EDAKALIALALLLGAALLALLLAVRWRRTGKPILFFLVFFFVALSPTSNLVVLIGSIMAERFLYLPSVGLAGCIVAAAYV LGRRRSLQQRAVAPVGWVALGLVCLAFTARTYARNLDWQDGMSLWTSAVEVCPGSARPHFNLAKELEAIPGRLSEAIAEY REAVRIDPDRADAHDNLGNALSGIPGRLTEAVAEFREAVRLQSDRAEAHNDLANALARKPDGLPETIGEYRAALRIEPRN AEVHYNLANALVRMPDKLPEAITEYQAALRIQPDHADAHNNLGEALSGIPGRLPEAIAEYRAALRIQPDLVAAHNNLGNA LSGMPGRMPEAIAEYHAALRIQPERAETHYNLGNALAGMPGRLPDAIAEFKAAVRSEPDFVEAHVSLGKAFALTPERRAD AIAEYEAALRIRPDPEVRRTLERLRASLQ >Mature_748_residues AKHRKSRDTSPPAAVTGSVAAGRTWWRHWRLLAICSLVLAAYSNSFQGALVFDNASVIGQDPRIRQATHESIESILTGGY AYVNAATGLYRPFTTLSYLLNYAVLGGGPRPVGYHWVNLVLHEVNLALVYALGMLIFGETAPALALAAIWGLHPLLTESV TNIVGRADLLAALGVLAGLLCHVRGASAAGRRGTAWLAGLAAAQTVALFSKESGVVLPGLMLLYDLTWRDRTMWRRCAAS YVAVAIPFAVFFSLRGALGMHMLIDQAENPLVSTGFFTARLTAVKVVGKLLWLFLWPARLSADYSYNAVPLFGWRLTNWE DAKALIALALLLGAALLALLLAVRWRRTGKPILFFLVFFFVALSPTSNLVVLIGSIMAERFLYLPSVGLAGCIVAAAYVL GRRRSLQQRAVAPVGWVALGLVCLAFTARTYARNLDWQDGMSLWTSAVEVCPGSARPHFNLAKELEAIPGRLSEAIAEYR EAVRIDPDRADAHDNLGNALSGIPGRLTEAVAEFREAVRLQSDRAEAHNDLANALARKPDGLPETIGEYRAALRIEPRNA EVHYNLANALVRMPDKLPEAITEYQAALRIQPDHADAHNNLGEALSGIPGRLPEAIAEYRAALRIQPDLVAAHNNLGNAL SGMPGRMPEAIAEYHAALRIQPERAETHYNLGNALAGMPGRLPDAIAEFKAAVRSEPDFVEAHVSLGKAFALTPERRADA IAEYEAALRIRPDPEVRRTLERLRASLQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI301336134, Length=775, Percent_Identity=27.741935483871, Blast_Score=188, Evalue=1e-47, Organism=Homo sapiens, GI118766330, Length=724, Percent_Identity=27.2099447513812, Blast_Score=187, Evalue=2e-47, Organism=Homo sapiens, GI118766328, Length=724, Percent_Identity=27.2099447513812, Blast_Score=187, Evalue=3e-47, Organism=Homo sapiens, GI224809432, Length=747, Percent_Identity=25.0334672021419, Blast_Score=182, Evalue=8e-46, Organism=Homo sapiens, GI83415184, Length=702, Percent_Identity=28.0626780626781, Blast_Score=172, Evalue=9e-43, Organism=Homo sapiens, GI32307148, Length=301, Percent_Identity=34.21926910299, Blast_Score=129, Evalue=9e-30, Organism=Homo sapiens, GI32307150, Length=301, Percent_Identity=34.21926910299, Blast_Score=129, Evalue=9e-30, Organism=Homo sapiens, GI22749211, Length=349, Percent_Identity=26.0744985673352, Blast_Score=89, Evalue=2e-17, Organism=Caenorhabditis elegans, GI25147174, Length=691, Percent_Identity=24.4573082489146, Blast_Score=155, Evalue=6e-38, Organism=Caenorhabditis elegans, GI17560436, Length=787, Percent_Identity=24.9047013977128, Blast_Score=130, Evalue=4e-30, Organism=Caenorhabditis elegans, GI115532692, Length=292, Percent_Identity=33.5616438356164, Blast_Score=124, Evalue=1e-28, Organism=Caenorhabditis elegans, GI115532690, Length=298, Percent_Identity=32.8859060402685, Blast_Score=124, Evalue=2e-28, Organism=Drosophila melanogaster, GI24656717, Length=757, Percent_Identity=24.5706737120211, Blast_Score=166, Evalue=4e-41, Organism=Drosophila melanogaster, GI18110006, Length=757, Percent_Identity=24.5706737120211, Blast_Score=166, Evalue=4e-41, Organism=Drosophila melanogaster, GI24647123, Length=621, Percent_Identity=25.6038647342995, Blast_Score=132, Evalue=7e-31, Organism=Drosophila melanogaster, GI17647755, Length=310, Percent_Identity=30.9677419354839, Blast_Score=125, Evalue=1e-28, Organism=Drosophila melanogaster, GI24585827, Length=310, Percent_Identity=30.9677419354839, Blast_Score=125, Evalue=1e-28, Organism=Drosophila melanogaster, GI24585829, Length=310, Percent_Identity=30.9677419354839, Blast_Score=125, Evalue=1e-28, Organism=Drosophila melanogaster, GI19920486, Length=398, Percent_Identity=30.1507537688442, Blast_Score=114, Evalue=3e-25, Organism=Drosophila melanogaster, GI161076610, Length=393, Percent_Identity=30.2798982188295, Blast_Score=113, Evalue=4e-25, Organism=Drosophila melanogaster, GI24581187, Length=441, Percent_Identity=29.2517006802721, Blast_Score=108, Evalue=9e-24, Organism=Drosophila melanogaster, GI281364285, Length=441, Percent_Identity=29.2517006802721, Blast_Score=108, Evalue=1e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 81433; Mature: 81302
Theoretical pI: Translated: 9.12; Mature: 9.12
Prosite motif: PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKHRKSRDTSPPAAVTGSVAAGRTWWRHWRLLAICSLVLAAYSNSFQGALVFDNASVIG CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHCC QDPRIRQATHESIESILTGGYAYVNAATGLYRPFTTLSYLLNYAVLGGGPRPVGYHWVNL CCCHHHHHHHHHHHHHHHCCHHEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH VLHEVNLALVYALGMLIFGETAPALALAAIWGLHPLLTESVTNIVGRADLLAALGVLAGL HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LCHVRGASAAGRRGTAWLAGLAAAQTVALFSKESGVVLPGLMLLYDLTWRDRTMWRRCAA HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHHH SYVAVAIPFAVFFSLRGALGMHMLIDQAENPLVSTGFFTARLTAVKVVGKLLWLFLWPAR HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHH LSADYSYNAVPLFGWRLTNWEDAKALIALALLLGAALLALLLAVRWRRTGKPILFFLVFF HCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH FVALSPTSNLVVLIGSIMAERFLYLPSVGLAGCIVAAAYVLGRRRSLQQRAVAPVGWVAL HHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH GLVCLAFTARTYARNLDWQDGMSLWTSAVEVCPGSARPHFNLAKELEAIPGRLSEAIAEY HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCHHHHHHHHHH REAVRIDPDRADAHDNLGNALSGIPGRLTEAVAEFREAVRLQSDRAEAHNDLANALARKP HHHHCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC DGLPETIGEYRAALRIEPRNAEVHYNLANALVRMPDKLPEAITEYQAALRIQPDHADAHN CCCHHHHHHHHHHEEECCCCCEEEEHHHHHHHHCCHHHHHHHHHHHHHHEECCCCCCHHC NLGEALSGIPGRLPEAIAEYRAALRIQPDLVAAHNNLGNALSGMPGRMPEAIAEYHAALR CHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHCCCCHHHCCCCCCCHHHHHHHHHHHC IQPERAETHYNLGNALAGMPGRLPDAIAEFKAAVRSEPDFVEAHVSLGKAFALTPERRAD CCCHHHHHHHCCCHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCEECCCHHHHH AIAEYEAALRIRPDPEVRRTLERLRASLQ HHHHHHHHEECCCCHHHHHHHHHHHHHCC >Mature Secondary Structure AKHRKSRDTSPPAAVTGSVAAGRTWWRHWRLLAICSLVLAAYSNSFQGALVFDNASVIG CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHCC QDPRIRQATHESIESILTGGYAYVNAATGLYRPFTTLSYLLNYAVLGGGPRPVGYHWVNL CCCHHHHHHHHHHHHHHHCCHHEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH VLHEVNLALVYALGMLIFGETAPALALAAIWGLHPLLTESVTNIVGRADLLAALGVLAGL HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LCHVRGASAAGRRGTAWLAGLAAAQTVALFSKESGVVLPGLMLLYDLTWRDRTMWRRCAA HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHHH SYVAVAIPFAVFFSLRGALGMHMLIDQAENPLVSTGFFTARLTAVKVVGKLLWLFLWPAR HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHH LSADYSYNAVPLFGWRLTNWEDAKALIALALLLGAALLALLLAVRWRRTGKPILFFLVFF HCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH FVALSPTSNLVVLIGSIMAERFLYLPSVGLAGCIVAAAYVLGRRRSLQQRAVAPVGWVAL HHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH GLVCLAFTARTYARNLDWQDGMSLWTSAVEVCPGSARPHFNLAKELEAIPGRLSEAIAEY HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCHHHHHHHHHH REAVRIDPDRADAHDNLGNALSGIPGRLTEAVAEFREAVRLQSDRAEAHNDLANALARKP HHHHCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC DGLPETIGEYRAALRIEPRNAEVHYNLANALVRMPDKLPEAITEYQAALRIQPDHADAHN CCCHHHHHHHHHHEEECCCCCEEEEHHHHHHHHCCHHHHHHHHHHHHHHEECCCCCCHHC NLGEALSGIPGRLPEAIAEYRAALRIQPDLVAAHNNLGNALSGMPGRMPEAIAEYHAALR CHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHCCCCHHHCCCCCCCHHHHHHHHHHHC IQPERAETHYNLGNALAGMPGRLPDAIAEFKAAVRSEPDFVEAHVSLGKAFALTPERRAD CCCHHHHHHHCCCHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCEECCCHHHHH AIAEYEAALRIRPDPEVRRTLERLRASLQ HHHHHHHHEECCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA