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The map label for this gene is groS [H]

Identifier: 116625796

GI number: 116625796

Start: 8451218

End: 8451535

Strand: Direct

Name: groS [H]

Synonym: Acid_6746

Alternate gene names: 116625796

Gene position: 8451218-8451535 (Clockwise)

Preceding gene: 116625795

Following gene: 116625797

Centisome position: 84.8

GC content: 52.2

Gene sequence:

>318_bases
ATGAAGATTCGTCCGCTCTATGACCGTATTGTGGTCAAACGTATTGAAAACACGGAACAGATGCAAGGTGGTCTGTACAT
TCCGGACACGGCCAAAGAGAAGCCCCAGGAAGGCGAAGTGGTCGCCGTGGGCAAGGGAAAGCGCCTGGAAGACGGCAAAG
TCATCGCGCTGGATGTGCAGGTTGGCGATAAGATTTTGTTCGGCAAGTATTCCGGCAGCGACATCAAGCTGGATGGCGAT
GAGTATTTGATTATGCGTGAGGACGAAGTCCTCGGGATTTTGGATGCTGCGCCCAAAGTGCAGAAGAAAGCTAGCTAG

Upstream 100 bases:

>100_bases
CTCTCACGGCAAGTGTGCTAATAATATTGCGAGGAACTCAAGGTGAGTTCCTCCGAGAAACCGGATTTAATTCCTATAAA
CAGCTGGAGGTTGTTGATCC

Downstream 100 bases:

>100_bases
GAGTCGATAACGAAATGGCGAAACAGATTGTATATTCCGAAGCTTCCCGTCAGGCGATTCTGCGCGGTGTAAACCAGCTC
GCGGATGCCGTGAAGGTGAC

Product: chaperonin Cpn10

Products: NA

Alternate protein names: GroES protein; Protein Cpn10 [H]

Number of amino acids: Translated: 105; Mature: 105

Protein sequence:

>105_residues
MKIRPLYDRIVVKRIENTEQMQGGLYIPDTAKEKPQEGEVVAVGKGKRLEDGKVIALDVQVGDKILFGKYSGSDIKLDGD
EYLIMREDEVLGILDAAPKVQKKAS

Sequences:

>Translated_105_residues
MKIRPLYDRIVVKRIENTEQMQGGLYIPDTAKEKPQEGEVVAVGKGKRLEDGKVIALDVQVGDKILFGKYSGSDIKLDGD
EYLIMREDEVLGILDAAPKVQKKAS
>Mature_105_residues
MKIRPLYDRIVVKRIENTEQMQGGLYIPDTAKEKPQEGEVVAVGKGKRLEDGKVIALDVQVGDKILFGKYSGSDIKLDGD
EYLIMREDEVLGILDAAPKVQKKAS

Specific function: Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter [H]

COG id: COG0234

COG function: function code O; Co-chaperonin GroES (HSP10)

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GroES chaperonin family [H]

Homologues:

Organism=Escherichia coli, GI1790585, Length=97, Percent_Identity=45.360824742268, Blast_Score=83, Evalue=4e-18,
Organism=Caenorhabditis elegans, GI17555568, Length=93, Percent_Identity=36.5591397849462, Blast_Score=77, Evalue=2e-15,
Organism=Saccharomyces cerevisiae, GI6324594, Length=91, Percent_Identity=40.6593406593407, Blast_Score=70, Evalue=7e-14,
Organism=Drosophila melanogaster, GI21356029, Length=97, Percent_Identity=37.1134020618557, Blast_Score=66, Evalue=4e-12,

Paralogues:

None

Copy number: 980 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 5720 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). 1274 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020818
- InterPro:   IPR011032 [H]

Pfam domain/function: PF00166 Cpn10 [H]

EC number: NA

Molecular weight: Translated: 11661; Mature: 11661

Theoretical pI: Translated: 5.27; Mature: 5.27

Prosite motif: PS00681 CHAPERONINS_CPN10

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIRPLYDRIVVKRIENTEQMQGGLYIPDTAKEKPQEGEVVAVGKGKRLEDGKVIALDVQ
CCCCHHHHHHHHHHHCCCHHHCCCEECCCCCCCCCCCCCEEEECCCCCCCCCCEEEEEEC
VGDKILFGKYSGSDIKLDGDEYLIMREDEVLGILDAAPKVQKKAS
CCCEEEEEECCCCEEEECCCCEEEEECCCEEEEECCCCCCCCCCC
>Mature Secondary Structure
MKIRPLYDRIVVKRIENTEQMQGGLYIPDTAKEKPQEGEVVAVGKGKRLEDGKVIALDVQ
CCCCHHHHHHHHHHHCCCHHHCCCEECCCCCCCCCCCCCEEEECCCCCCCCCCEEEEEEC
VGDKILFGKYSGSDIKLDGDEYLIMREDEVLGILDAAPKVQKKAS
CCCEEEEEECCCCEEEECCCCEEEEECCCEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA