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The map label for this gene is ydbC [H]

Identifier: 116625784

GI number: 116625784

Start: 8436880

End: 8437776

Strand: Direct

Name: ydbC [H]

Synonym: Acid_6734

Alternate gene names: 116625784

Gene position: 8436880-8437776 (Clockwise)

Preceding gene: 116625783

Following gene: 116625787

Centisome position: 84.66

GC content: 61.09

Gene sequence:

>897_bases
ATGAGAGAACGAAATAACGTGGTGCGCAGCTTTACGTTTCCCGGCACTTCGCTGACTGTGAACCGGATGGGTTATGGCGC
GATGCAGCTTGCCGGACAGGATGGCGACAAGCGAGTCTGGGGGCCGCCGCGCGACATTCCCGGTGCGATCGCGGTTCTGC
GCGAGGCTGTGGCATCGGGTGTGAATCACATCGATACCAGCGATTTCTACGGTCCGCACGTAACCAATCAAATCATCAGA
CAGGCGCTGCATCCTTATCCGGATGATCTGGTCATCGTGACGAAAGTCGGAGGCCGCCGCGGCACCGACGGTTCCTGGCT
GCACGCACGCTCCCGCCAGGAGATTATTAGCGCCGTACACGACAATTTGCGCAACCTGGGCCTCGAAACGCTCCACGTGG
TGAATCTCCGGCTGGGGGGATTCGCCGCTCCGGAAGACGAGCCATTCGAAGAGCCGCTCTCCGCACTCACAGAACTCAAG
CAGCAGGGTTTGGTTCAGCATATCGGGCTGAGCACAGTCTCTCCCAGGCAACTGGTAGAGGCGCAGGGGATCACGGAGAT
CGTCTGCATTCAGAACATGTATAACGTCGCCCAGCGTGGGGACGACCAATTCGTGGACGATCTGGCCGCGCAAGGGATCG
CCTACGTGCCGTACTTTCCGCTTGGAGGCTTTTCGCCACTGCAATCGGCACAGCTGGATGCGGCGGCGGCATCGCTCAAG
GCAACGCCCATGCAGGTGGCGCTGGCATGGCTGCATCAGCGCGCTCCCAACATTCTGCTCATCCCGGGGACATCATCGGT
CGGTCATCTCCGCGAAAATCTCGCGGCGGCGACGCTCGAGCTTCCACCGGAGACGGTTGCCGAACTCGACCGGCTCGCGC
TTGCCCCTCTCAGGTGA

Upstream 100 bases:

>100_bases
CACTCGATCCGCACAACGCCGCGGCACTGTGGAAGAAGAGCGAGGAACTGGTCGGAGAATCGTACTGAGTCTTGCAACTA
TATAAGGGGGAATAAGCGGG

Downstream 100 bases:

>100_bases
GGGGGGCACTGGTTCAGCTTGTCTTCGCTGAAAGCCACGCTGCCGCAGTCAAACATAGCGTAATAACGATTGAAAAAACG
ATAGGGACGATAAAGAGGTA

Product: putative oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 298; Mature: 298

Protein sequence:

>298_residues
MRERNNVVRSFTFPGTSLTVNRMGYGAMQLAGQDGDKRVWGPPRDIPGAIAVLREAVASGVNHIDTSDFYGPHVTNQIIR
QALHPYPDDLVIVTKVGGRRGTDGSWLHARSRQEIISAVHDNLRNLGLETLHVVNLRLGGFAAPEDEPFEEPLSALTELK
QQGLVQHIGLSTVSPRQLVEAQGITEIVCIQNMYNVAQRGDDQFVDDLAAQGIAYVPYFPLGGFSPLQSAQLDAAAASLK
ATPMQVALAWLHQRAPNILLIPGTSSVGHLRENLAAATLELPPETVAELDRLALAPLR

Sequences:

>Translated_298_residues
MRERNNVVRSFTFPGTSLTVNRMGYGAMQLAGQDGDKRVWGPPRDIPGAIAVLREAVASGVNHIDTSDFYGPHVTNQIIR
QALHPYPDDLVIVTKVGGRRGTDGSWLHARSRQEIISAVHDNLRNLGLETLHVVNLRLGGFAAPEDEPFEEPLSALTELK
QQGLVQHIGLSTVSPRQLVEAQGITEIVCIQNMYNVAQRGDDQFVDDLAAQGIAYVPYFPLGGFSPLQSAQLDAAAASLK
ATPMQVALAWLHQRAPNILLIPGTSSVGHLRENLAAATLELPPETVAELDRLALAPLR
>Mature_298_residues
MRERNNVVRSFTFPGTSLTVNRMGYGAMQLAGQDGDKRVWGPPRDIPGAIAVLREAVASGVNHIDTSDFYGPHVTNQIIR
QALHPYPDDLVIVTKVGGRRGTDGSWLHARSRQEIISAVHDNLRNLGLETLHVVNLRLGGFAAPEDEPFEEPLSALTELK
QQGLVQHIGLSTVSPRQLVEAQGITEIVCIQNMYNVAQRGDDQFVDDLAAQGIAYVPYFPLGGFSPLQSAQLDAAAASLK
ATPMQVALAWLHQRAPNILLIPGTSSVGHLRENLAAATLELPPETVAELDRLALAPLR

Specific function: Unknown

COG id: COG0667

COG function: function code C; Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aldo/keto reductase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1787674, Length=288, Percent_Identity=63.8888888888889, Blast_Score=359, Evalue=1e-100,
Organism=Escherichia coli, GI87081735, Length=313, Percent_Identity=28.1150159744409, Blast_Score=102, Evalue=2e-23,
Organism=Escherichia coli, GI1789375, Length=294, Percent_Identity=24.8299319727891, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1788081, Length=263, Percent_Identity=25.4752851711027, Blast_Score=66, Evalue=3e-12,
Organism=Escherichia coli, GI1786400, Length=254, Percent_Identity=28.3464566929134, Blast_Score=62, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001395
- InterPro:   IPR023210 [H]

Pfam domain/function: PF00248 Aldo_ket_red [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 32320; Mature: 32320

Theoretical pI: Translated: 6.03; Mature: 6.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRERNNVVRSFTFPGTSLTVNRMGYGAMQLAGQDGDKRVWGPPRDIPGAIAVLREAVASG
CCCCCCEEEEEECCCCEEEEECCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHC
VNHIDTSDFYGPHVTNQIIRQALHPYPDDLVIVTKVGGRRGTDGSWLHARSRQEIISAVH
CCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHH
DNLRNLGLETLHVVNLRLGGFAAPEDEPFEEPLSALTELKQQGLVQHIGLSTVSPRQLVE
HHHHHCCHHHEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
AQGITEIVCIQNMYNVAQRGDDQFVDDLAAQGIAYVPYFPLGGFSPLQSAQLDAAAASLK
HCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCEEECCCCCCCCCCCHHHHHHHHHHHHHC
ATPMQVALAWLHQRAPNILLIPGTSSVGHLRENLAAATLELPPETVAELDRLALAPLR
CCHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MRERNNVVRSFTFPGTSLTVNRMGYGAMQLAGQDGDKRVWGPPRDIPGAIAVLREAVASG
CCCCCCEEEEEECCCCEEEEECCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHC
VNHIDTSDFYGPHVTNQIIRQALHPYPDDLVIVTKVGGRRGTDGSWLHARSRQEIISAVH
CCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHH
DNLRNLGLETLHVVNLRLGGFAAPEDEPFEEPLSALTELKQQGLVQHIGLSTVSPRQLVE
HHHHHCCHHHEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
AQGITEIVCIQNMYNVAQRGDDQFVDDLAAQGIAYVPYFPLGGFSPLQSAQLDAAAASLK
HCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCEEECCCCCCCCCCCHHHHHHHHHHHHHC
ATPMQVALAWLHQRAPNILLIPGTSSVGHLRENLAAATLELPPETVAELDRLALAPLR
CCHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Oxidoreductases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1665988; 9097039; 9278503; 9748275 [H]