Click here to switch to the map view.

The map label for this gene is cphB [H]

Identifier: 116625649

GI number: 116625649

Start: 8276020

End: 8276991

Strand: Direct

Name: cphB [H]

Synonym: Acid_6598

Alternate gene names: 116625649

Gene position: 8276020-8276991 (Clockwise)

Preceding gene: 116625648

Following gene: 116625651

Centisome position: 83.05

GC content: 67.49

Gene sequence:

>972_bases
ATGCATCGCCAACTAATCTGCCTGTTGACCGTGGCCGCTTGCGCGCAGGCGCCGCCGAAGACCTACGAATATTACCTGAC
GGGCAATGCGGCGGACGTGAAGCCGGCGACGCGGCCAGGCTTCGTGCTGATGGGCGGCGGTAAGGACGTGGACGCGGCAT
TCCGCTGGATGCTGGCCAAGGCGGGGGGCGGGGACGTGGTAGTGCTGCGCGCGTCGGGCAGCGACGGCTACAACAAGTAC
ATCCACGAGATGGGCGCGGACAGCGTGGAATCGATCGTGGTGAAGACGGCGGAGGCGGCGCGCGACGCGTTCGTGCTGGA
GAAGATCCGGCACGCGGAGGCGCTGTGGATCGCGGGCGGCGACCAGTGGAACTATGTGCGCGTGTGGGGCGCGTCGCCGA
TGCGCGAGGAGATCCACGCGCTGATCGATCGCGGGGTGCCGGTGGGCGGGACCAGTGCGGGGCTGGCTGTGCTGGGCCAA
TTCGTGTTCACGGCGGAGAAGGATAGCGTGACGTCGGCGCAGGCGCTGGCCAATCCGTACGACGAGCGGGTGAAGATCGG
CGAGGACTTCGTGAAGATTCCGGCGCTGCGCGGGGTGATCACGGACACGCACTTCGTGAAGCGCGACCGGCTGGGGCGGC
TGCTGACCTTCCTGGCGCGGATTGTGGAGGACGGGAAGGCGGCGGAGGCACGGGCGATCGCGGTGGACGAGCGCACGGCG
GCGCTGGTGGAACCGGACGGATCGGTGACGATCGAAGGCGAGGGGCCGGCGTATTTCCTGCGACTCGCGGGGAAGGCGGA
AGTGTGCAAACCGGGCAGGCCGCTGACGATCGCGAAGATCAGCGTGTATCGCGTGAAGGCTGGGGACAGCTTCGATTTGA
AGAAGTGGACCGGGCGCGGCGGCGCGGCGTATGAACTCTCCGTGCGCGAGGGCGTGATCGCGTCAACACAGTCGGGCGGC
GGGATGTATTAA

Upstream 100 bases:

>100_bases
GCTGCGGCGCGACCGGCGCGTAGGAGCGGCGCTGCTGGCAATGGGCTGCACGGTTGCGGGCGTGCTGGCGGTGTGGATGA
GGCTGGGGTAGAGTTACGAA

Downstream 100 bases:

>100_bases
AAAGCGGAGGGGTATACCCTCGAGAGAGCGCCACGCAGTTGACGGGGCGAGCCGGCTGAAAGCCGGCTGCAGGCAGGATT
GCCTGCCCCACAAGGCGGGC

Product: cyanophycinase and related exopeptidase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 323; Mature: 323

Protein sequence:

>323_residues
MHRQLICLLTVAACAQAPPKTYEYYLTGNAADVKPATRPGFVLMGGGKDVDAAFRWMLAKAGGGDVVVLRASGSDGYNKY
IHEMGADSVESIVVKTAEAARDAFVLEKIRHAEALWIAGGDQWNYVRVWGASPMREEIHALIDRGVPVGGTSAGLAVLGQ
FVFTAEKDSVTSAQALANPYDERVKIGEDFVKIPALRGVITDTHFVKRDRLGRLLTFLARIVEDGKAAEARAIAVDERTA
ALVEPDGSVTIEGEGPAYFLRLAGKAEVCKPGRPLTIAKISVYRVKAGDSFDLKKWTGRGGAAYELSVREGVIASTQSGG
GMY

Sequences:

>Translated_323_residues
MHRQLICLLTVAACAQAPPKTYEYYLTGNAADVKPATRPGFVLMGGGKDVDAAFRWMLAKAGGGDVVVLRASGSDGYNKY
IHEMGADSVESIVVKTAEAARDAFVLEKIRHAEALWIAGGDQWNYVRVWGASPMREEIHALIDRGVPVGGTSAGLAVLGQ
FVFTAEKDSVTSAQALANPYDERVKIGEDFVKIPALRGVITDTHFVKRDRLGRLLTFLARIVEDGKAAEARAIAVDERTA
ALVEPDGSVTIEGEGPAYFLRLAGKAEVCKPGRPLTIAKISVYRVKAGDSFDLKKWTGRGGAAYELSVREGVIASTQSGG
GMY
>Mature_323_residues
MHRQLICLLTVAACAQAPPKTYEYYLTGNAADVKPATRPGFVLMGGGKDVDAAFRWMLAKAGGGDVVVLRASGSDGYNKY
IHEMGADSVESIVVKTAEAARDAFVLEKIRHAEALWIAGGDQWNYVRVWGASPMREEIHALIDRGVPVGGTSAGLAVLGQ
FVFTAEKDSVTSAQALANPYDERVKIGEDFVKIPALRGVITDTHFVKRDRLGRLLTFLARIVEDGKAAEARAIAVDERTA
ALVEPDGSVTIEGEGPAYFLRLAGKAEVCKPGRPLTIAKISVYRVKAGDSFDLKKWTGRGGAAYELSVREGVIASTQSGG
GMY

Specific function: Exopeptidase that catalyzes the hydrolytic cleavage of multi-L-arginyl-poly-L-aspartic acid (cyanophycin; a water- insoluble reserve polymer) into aspartate-arginine dipeptides [H]

COG id: COG4242

COG function: function code QP; Cyanophycinase and related exopeptidases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S51 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005320
- InterPro:   IPR011811 [H]

Pfam domain/function: PF03575 Peptidase_S51 [H]

EC number: =3.4.15.6 [H]

Molecular weight: Translated: 34590; Mature: 34590

Theoretical pI: Translated: 8.05; Mature: 8.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHRQLICLLTVAACAQAPPKTYEYYLTGNAADVKPATRPGFVLMGGGKDVDAAFRWMLAK
CCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCEEEEECCCCHHHHHHHHHEE
AGGGDVVVLRASGSDGYNKYIHEMGADSVESIVVKTAEAARDAFVLEKIRHAEALWIAGG
CCCCCEEEEEECCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECC
DQWNYVRVWGASPMREEIHALIDRGVPVGGTSAGLAVLGQFVFTAEKDSVTSAQALANPY
CCCCEEEEECCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHEECCCCCCHHHHHHCCCC
DERVKIGEDFVKIPALRGVITDTHFVKRDRLGRLLTFLARIVEDGKAAEARAIAVDERTA
HHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCE
ALVEPDGSVTIEGEGPAYFLRLAGKAEVCKPGRPLTIAKISVYRVKAGDSFDLKKWTGRG
EEECCCCCEEEECCCCEEEEEECCCCCCCCCCCCEEEEEEEEEEEECCCCCCCHHCCCCC
GAAYELSVREGVIASTQSGGGMY
CCEEEEEECCCEEEECCCCCCCC
>Mature Secondary Structure
MHRQLICLLTVAACAQAPPKTYEYYLTGNAADVKPATRPGFVLMGGGKDVDAAFRWMLAK
CCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCEEEEECCCCHHHHHHHHHEE
AGGGDVVVLRASGSDGYNKYIHEMGADSVESIVVKTAEAARDAFVLEKIRHAEALWIAGG
CCCCCEEEEEECCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECC
DQWNYVRVWGASPMREEIHALIDRGVPVGGTSAGLAVLGQFVFTAEKDSVTSAQALANPY
CCCCEEEEECCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHEECCCCCCHHHHHHCCCC
DERVKIGEDFVKIPALRGVITDTHFVKRDRLGRLLTFLARIVEDGKAAEARAIAVDERTA
HHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCE
ALVEPDGSVTIEGEGPAYFLRLAGKAEVCKPGRPLTIAKISVYRVKAGDSFDLKKWTGRG
EEECCCCCEEEECCCCEEEEEECCCCCCCCCCCCEEEEEEEEEEEECCCCCCCHHCCCCC
GAAYELSVREGVIASTQSGGGMY
CCEEEEEECCCEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9652408 [H]