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The map label for this gene is ypfJ [H]

Identifier: 116625635

GI number: 116625635

Start: 8256170

End: 8257045

Strand: Direct

Name: ypfJ [H]

Synonym: Acid_6584

Alternate gene names: 116625635

Gene position: 8256170-8257045 (Clockwise)

Preceding gene: 116625634

Following gene: 116625636

Centisome position: 82.85

GC content: 64.61

Gene sequence:

>876_bases
ATGGAGTGGACACCTGGCGGTGATCGATCGGACGTAGAAGACCGGCGCGGAGAGAGCGGCGGCGGCGGCTTCAACCTCGG
CGGGTTCGGCGGCATTCACCTCGGCATCGGCGGAACGCTGATACTGCTGGTGCTGAGCTTCCTCTTCCGCACCAACCTCT
TCTCGATCTTCGGTGGCGGTACGGTTGCCCCCGCGCCCACCGAAGCCTCGCGGCCGCTCTCCGACCCCGATTCCAGCGCG
GCGGAAAAACGGCAGACGGATTTCATCGTCTTCGTATTGAACGACGTGCAGCATACGTGGGAGCAGATTCTTCCCCGACA
GGGCACGCCCTACCGTCACACGAAACTGGTGCTGTTTACCGACCTGACGAACTCCGGCTGCGGCACCGCGCAATCGGCCA
CCGGCCCGTTTTATTGCCCGCAGGATGAGAAGGTCTACATCGATCTGGGCTTCTTCAAGGAGTTGCGCGATCGCTTCGGT
GCTCCGGGCGAGTTCGCGCAGGCCTACGTACTGGCCCACGAAATCGGCCACCACGTGCAGAAGTTACTCGGCATCGAAGG
CCAGGTTCACCGGCTGCAGCGCGGCGATCCTTCACAGGCCAATCCACTCTCGGTGAAGCTCGAATTGCAGGCGGATTGCT
TCGCGGGCGTGTGGGGCCACAGTACGGAACAACGCAAGATGGTGGATGATGCCGATGTGGCGGCGGGCCTCCGCGCAGCC
GCCGCGGTGGGCGACGACCGGCTGCAGCGCCTGACCACCGGCCGCGTCAGCCCCGAAAGCTTCACGCACGGAAGCTCGGC
CCAGCGCACCGATTGGTTCCGTCGCGGGTTGCAATCCGGCCAGGTCTCCACCTGCGATACCTTCGGCGCCCGGTAA

Upstream 100 bases:

>100_bases
TCCGCACGCGACCTACGAGAAGATCAAGGACATGATCGTCGCGAAGCAGCCATCGGCTAAGAAATAGCACGTTGGCGTCC
CGCGTGCCTGTTGTTTGCGC

Downstream 100 bases:

>100_bases
CATCGCGCGGCCCATCCGCGCTACCATCTGGAAAATGCGTTCGAAATGTCTCCCTTTGGTAGCGGTGTTTATTCCCCTTT
GCATGGCCCAGGTACCCACG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 291; Mature: 291

Protein sequence:

>291_residues
MEWTPGGDRSDVEDRRGESGGGGFNLGGFGGIHLGIGGTLILLVLSFLFRTNLFSIFGGGTVAPAPTEASRPLSDPDSSA
AEKRQTDFIVFVLNDVQHTWEQILPRQGTPYRHTKLVLFTDLTNSGCGTAQSATGPFYCPQDEKVYIDLGFFKELRDRFG
APGEFAQAYVLAHEIGHHVQKLLGIEGQVHRLQRGDPSQANPLSVKLELQADCFAGVWGHSTEQRKMVDDADVAAGLRAA
AAVGDDRLQRLTTGRVSPESFTHGSSAQRTDWFRRGLQSGQVSTCDTFGAR

Sequences:

>Translated_291_residues
MEWTPGGDRSDVEDRRGESGGGGFNLGGFGGIHLGIGGTLILLVLSFLFRTNLFSIFGGGTVAPAPTEASRPLSDPDSSA
AEKRQTDFIVFVLNDVQHTWEQILPRQGTPYRHTKLVLFTDLTNSGCGTAQSATGPFYCPQDEKVYIDLGFFKELRDRFG
APGEFAQAYVLAHEIGHHVQKLLGIEGQVHRLQRGDPSQANPLSVKLELQADCFAGVWGHSTEQRKMVDDADVAAGLRAA
AAVGDDRLQRLTTGRVSPESFTHGSSAQRTDWFRRGLQSGQVSTCDTFGAR
>Mature_291_residues
MEWTPGGDRSDVEDRRGESGGGGFNLGGFGGIHLGIGGTLILLVLSFLFRTNLFSIFGGGTVAPAPTEASRPLSDPDSSA
AEKRQTDFIVFVLNDVQHTWEQILPRQGTPYRHTKLVLFTDLTNSGCGTAQSATGPFYCPQDEKVYIDLGFFKELRDRFG
APGEFAQAYVLAHEIGHHVQKLLGIEGQVHRLQRGDPSQANPLSVKLELQADCFAGVWGHSTEQRKMVDDADVAAGLRAA
AAVGDDRLQRLTTGRVSPESFTHGSSAQRTDWFRRGLQSGQVSTCDTFGAR

Specific function: Unknown

COG id: COG2321

COG function: function code R; Predicted metalloprotease

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788819, Length=292, Percent_Identity=44.8630136986301, Blast_Score=247, Evalue=7e-67,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007343 [H]

Pfam domain/function: PF04228 Zn_peptidase [H]

EC number: NA

Molecular weight: Translated: 31553; Mature: 31553

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEWTPGGDRSDVEDRRGESGGGGFNLGGFGGIHLGIGGTLILLVLSFLFRTNLFSIFGGG
CCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHCCC
TVAPAPTEASRPLSDPDSSAAEKRQTDFIVFVLNDVQHTWEQILPRQGTPYRHTKLVLFT
CCCCCCCCCCCCCCCCCCHHHHHHCCCEEEEEEHHHHHHHHHHCCCCCCCCCCEEEEEEE
DLTNSGCGTAQSATGPFYCPQDEKVYIDLGFFKELRDRFGAPGEFAQAYVLAHEIGHHVQ
ECCCCCCCCCCCCCCCEECCCCCEEEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
KLLGIEGQVHRLQRGDPSQANPLSVKLELQADCFAGVWGHSTEQRKMVDDADVAAGLRAA
HHHCCCHHHHHHHCCCCCCCCCEEEEEEECCCHHHHCCCCCCHHHHHHHHHHHHHHHHHH
AAVGDDRLQRLTTGRVSPESFTHGSSAQRTDWFRRGLQSGQVSTCDTFGAR
HHHCHHHHHHHHCCCCCCHHCCCCCCCHHHHHHHHHHCCCCCCCCHHCCCC
>Mature Secondary Structure
MEWTPGGDRSDVEDRRGESGGGGFNLGGFGGIHLGIGGTLILLVLSFLFRTNLFSIFGGG
CCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHCCC
TVAPAPTEASRPLSDPDSSAAEKRQTDFIVFVLNDVQHTWEQILPRQGTPYRHTKLVLFT
CCCCCCCCCCCCCCCCCCHHHHHHCCCEEEEEEHHHHHHHHHHCCCCCCCCCCEEEEEEE
DLTNSGCGTAQSATGPFYCPQDEKVYIDLGFFKELRDRFGAPGEFAQAYVLAHEIGHHVQ
ECCCCCCCCCCCCCCCEECCCCCEEEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
KLLGIEGQVHRLQRGDPSQANPLSVKLELQADCFAGVWGHSTEQRKMVDDADVAAGLRAA
HHHCCCHHHHHHHCCCCCCCCCEEEEEEECCCHHHHCCCCCCHHHHHHHHHHHHHHHHHH
AAVGDDRLQRLTTGRVSPESFTHGSSAQRTDWFRRGLQSGQVSTCDTFGAR
HHHCHHHHHHHHCCCCCCHHCCCCCCCHHHHHHHHHHCCCCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]