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The map label for this gene is 116625616

Identifier: 116625616

GI number: 116625616

Start: 8225657

End: 8226691

Strand: Reverse

Name: 116625616

Synonym: Acid_6565

Alternate gene names: NA

Gene position: 8226691-8225657 (Counterclockwise)

Preceding gene: 116625617

Following gene: 116625594

Centisome position: 82.55

GC content: 60.29

Gene sequence:

>1035_bases
ATGAGCACTTCGAGGCGGAGATTCCTGCAGACGGCGTGTGCGGCGGCCCCGGTAATGTTGGGCGCCACCGACAAAACGGG
GACCAAGCCGCCGGTAATCGGCACCGGCAAACACACCTACGAGGCCATCCATGATTGGGGTGAACTGCCCGCCGGCATCA
AGTATGGCAATACGCACGGCGTGGTCGAAGACTCGCACGGCCATATCTACGTGCATCACACCGTCCACGCCACCAGCGAG
ATCCCCGATTCCATGGTGGTCTTCGACGAAAAGGGCAAGTTCGTCAAGAGTTGGGGCAAGGAATTCAAGGGTGGCGCGCA
CGGCCTGCACATTCAGAAGGAAGGCAGCACCGAATACCTCTACCTCTGCGACACCGCGCGCGGCATAGTCATGAAGGCCA
CGCTCGATGGCGAGAAGGTCTACCAGCTCGGCTATCCCGACATGTCGGAGGCCTACAAGCCCGGCGCCGACGGCAAGAAG
CCAAAGTACAGCCCTACCAACCTGACTATCGGCCCGACCGGCGATCTATACGTCGGCGATGGCTACGGCTCCAGCTATAT
CAATCAGTACAACAACAAGGGCGAGTACATCCGCACCTTCGGTGGTAAAGGCAAAGACGCCGGCCAGCTCGATTGCCCGC
ACGGCATCATCGTGGACTACCGCGGCAGCAAACCGCTTCTGGCCGTGGCGGACCGCGGCAATGCGCGCATTCAGCGCTTC
AGCCTGGACGGCAAGCACCTTGATTTCGTCACCGGCACCGCCATGCCCTGCCACTTCAACTTCTTCAAGAACGGAGACGT
CGTGATCCCGGACCTGGGAGCGCGCGTCACACTCATGGACAAGGACAATCAGGTAGTCGCACAACTCGGCGACGATTCCG
CCAGTAAGTGGCGGGACACCCGGAAGATGTCCCGCGACCACTTCACGCCTGGAAAATTCGTCGCACCCCACGGTGCCTGC
TTCGACCACAAAGGCAACATCTTTGTCGTCGAGTGGGTCGAAGTCGGCCGCGTGACCAAACTGCGTAAGGTATAA

Upstream 100 bases:

>100_bases
TTGGGCGAAGTCACCGTGAGTGTATGGCCGAAGATCCTCAAGGAGATCTGCGCGGCGAAGAATATTCACGTACTCGAGTA
ATTTGTGTATACTGCCTCCC

Downstream 100 bases:

>100_bases
GTTACTCGTGCAGGGCTACTTCTACTATCGCCGCCAGGATATCGCGGCCAATCGGCGACGGGTGAATATCGCAGGGGGTC
GGCGATCCCGCGGGTAGGCG

Product: NHL repeat-containing protein

Products: NA

Alternate protein names: NHL Repeat-Containing Protein; Peptidylglycine Monooxygenase; Twin-Arginine Translocation Pathway Signal; Peptidylglycine Monooxygenase-Like; Type I Secretion Outer Membrane Protein lC; Coagulation Factor 5/8 Type Domain Protein; NHL Repeat Protein; PKD Domain Containing Protein; Surface Layer Protein

Number of amino acids: Translated: 344; Mature: 343

Protein sequence:

>344_residues
MSTSRRRFLQTACAAAPVMLGATDKTGTKPPVIGTGKHTYEAIHDWGELPAGIKYGNTHGVVEDSHGHIYVHHTVHATSE
IPDSMVVFDEKGKFVKSWGKEFKGGAHGLHIQKEGSTEYLYLCDTARGIVMKATLDGEKVYQLGYPDMSEAYKPGADGKK
PKYSPTNLTIGPTGDLYVGDGYGSSYINQYNNKGEYIRTFGGKGKDAGQLDCPHGIIVDYRGSKPLLAVADRGNARIQRF
SLDGKHLDFVTGTAMPCHFNFFKNGDVVIPDLGARVTLMDKDNQVVAQLGDDSASKWRDTRKMSRDHFTPGKFVAPHGAC
FDHKGNIFVVEWVEVGRVTKLRKV

Sequences:

>Translated_344_residues
MSTSRRRFLQTACAAAPVMLGATDKTGTKPPVIGTGKHTYEAIHDWGELPAGIKYGNTHGVVEDSHGHIYVHHTVHATSE
IPDSMVVFDEKGKFVKSWGKEFKGGAHGLHIQKEGSTEYLYLCDTARGIVMKATLDGEKVYQLGYPDMSEAYKPGADGKK
PKYSPTNLTIGPTGDLYVGDGYGSSYINQYNNKGEYIRTFGGKGKDAGQLDCPHGIIVDYRGSKPLLAVADRGNARIQRF
SLDGKHLDFVTGTAMPCHFNFFKNGDVVIPDLGARVTLMDKDNQVVAQLGDDSASKWRDTRKMSRDHFTPGKFVAPHGAC
FDHKGNIFVVEWVEVGRVTKLRKV
>Mature_343_residues
STSRRRFLQTACAAAPVMLGATDKTGTKPPVIGTGKHTYEAIHDWGELPAGIKYGNTHGVVEDSHGHIYVHHTVHATSEI
PDSMVVFDEKGKFVKSWGKEFKGGAHGLHIQKEGSTEYLYLCDTARGIVMKATLDGEKVYQLGYPDMSEAYKPGADGKKP
KYSPTNLTIGPTGDLYVGDGYGSSYINQYNNKGEYIRTFGGKGKDAGQLDCPHGIIVDYRGSKPLLAVADRGNARIQRFS
LDGKHLDFVTGTAMPCHFNFFKNGDVVIPDLGARVTLMDKDNQVVAQLGDDSASKWRDTRKMSRDHFTPGKFVAPHGACF
DHKGNIFVVEWVEVGRVTKLRKV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Caenorhabditis elegans, GI115533679, Length=138, Percent_Identity=33.3333333333333, Blast_Score=65, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37755; Mature: 37624

Theoretical pI: Translated: 8.82; Mature: 8.82

Prosite motif: PS51125 NHL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTSRRRFLQTACAAAPVMLGATDKTGTKPPVIGTGKHTYEAIHDWGELPAGIKYGNTHG
CCCHHHHHHHHHHHHCCEEEECCCCCCCCCCEEECCCHHHHHHHHHHCCCCCEEECCCCC
VVEDSHGHIYVHHTVHATSEIPDSMVVFDEKGKFVKSWGKEFKGGAHGLHIQKEGSTEYL
EEECCCCEEEEEEEEEECCCCCCCEEEECCCCHHHHHHHHHHCCCCCEEEEEECCCCCEE
YLCDTARGIVMKATLDGEKVYQLGYPDMSEAYKPGADGKKPKYSPTNLTIGPTGDLYVGD
EEEECCCCEEEEEEECCCEEEEECCCCHHHHCCCCCCCCCCCCCCCEEEECCCCCEEEEC
GYGSSYINQYNNKGEYIRTFGGKGKDAGQLDCPHGIIVDYRGSKPLLAVADRGNARIQRF
CCCCHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCEEEEECCCCCEEEEECCCCCEEEEE
SLDGKHLDFVTGTAMPCHFNFFKNGDVVIPDLGARVTLMDKDNQVVAQLGDDSASKWRDT
ECCCCEEEEEECCCCEEEEEEECCCCEEEECCCCEEEEEECCCEEEEEECCCCHHHHHHH
RKMSRDHFTPGKFVAPHGACFDHKGNIFVVEWVEVGRVTKLRKV
HHHHHCCCCCCCEECCCCCEEECCCCEEEEEEECCCCCHHHHCC
>Mature Secondary Structure 
STSRRRFLQTACAAAPVMLGATDKTGTKPPVIGTGKHTYEAIHDWGELPAGIKYGNTHG
CCHHHHHHHHHHHHCCEEEECCCCCCCCCCEEECCCHHHHHHHHHHCCCCCEEECCCCC
VVEDSHGHIYVHHTVHATSEIPDSMVVFDEKGKFVKSWGKEFKGGAHGLHIQKEGSTEYL
EEECCCCEEEEEEEEEECCCCCCCEEEECCCCHHHHHHHHHHCCCCCEEEEEECCCCCEE
YLCDTARGIVMKATLDGEKVYQLGYPDMSEAYKPGADGKKPKYSPTNLTIGPTGDLYVGD
EEEECCCCEEEEEEECCCEEEEECCCCHHHHCCCCCCCCCCCCCCCEEEECCCCCEEEEC
GYGSSYINQYNNKGEYIRTFGGKGKDAGQLDCPHGIIVDYRGSKPLLAVADRGNARIQRF
CCCCHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCEEEEECCCCCEEEEECCCCCEEEEE
SLDGKHLDFVTGTAMPCHFNFFKNGDVVIPDLGARVTLMDKDNQVVAQLGDDSASKWRDT
ECCCCEEEEEECCCCEEEEEEECCCCEEEECCCCEEEEEECCCEEEEEECCCCHHHHHHH
RKMSRDHFTPGKFVAPHGACFDHKGNIFVVEWVEVGRVTKLRKV
HHHHHCCCCCCCEECCCCCEEECCCCEEEEEEECCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA