| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is macB [H]
Identifier: 116625576
GI number: 116625576
Start: 8180086
End: 8182563
Strand: Reverse
Name: macB [H]
Synonym: Acid_6524
Alternate gene names: 116625576
Gene position: 8182563-8180086 (Counterclockwise)
Preceding gene: 116625577
Following gene: 116625575
Centisome position: 82.11
GC content: 61.62
Gene sequence:
>2478_bases ATGAATATCGAATCCCTCTCCACCGCCCTGCGTTACTGGGTCCGCACCCTCCGCCGCGAGCCCATGTTCACAGCCGCTGC GACCCTGACACTGGCCCTGGGCATCGGCGCCACCACCGCGATCTTCTCCGTGGTCAACGGCGTCCTCATCAAGCCGCTGC CGTATCCGGCTGCCGATGAGCTCCTCAGCATTTCGCACTTTGCGCCGGGGATGGGCTTCGCCCAGCCCATCGGGATATCG CCTTCCATGCTGTTCACCTACCGGGAAGAGGGCCATGTGTTCCAATCCATCGGAGCATGGTCTCCGGACGCCGCCACCGT GACCGGCCTCGCCGAACCCGAGCGGGTTCCCACCGTTCGGATCACTCTCGGCACACTGCAAGTGCTCAGAGTCCCTCCTC TCATTGGGCGGTGGCCATCCCAGGAAGACGATACCGAGGGCGCGCCCGAAGTCATTCTCTTGAGCTACGGCTACTGGCAG AGGAGGTTTGGCGGGGATCCGAGTGTCGTCGGCCGCGGCATCACGGTCGATTCCCGGCCGCGCCAGATTATCGGTGTGAT GCCCCCATCCTATTTCCGCCTGATGAGCCAGGATCCCGACCTTTTCATTCCCATGCGGTTCGACCGGAATCGACTGCATC TGGGAGACCTGGGCTTTCTGGGAATCGCCAGGCTTAAACCCGGCGTCAGCCTTGCCCAAGCCAACTCGGACGTCGCCCGC ATGCTTCCCATCTGGCTCCGAAGTTGGCCTGGCCCCAATGCCAATTTCGGCAGGGAGGTATTCGAGCAGGCGCGGTTCAG CCCGGCGCTGCGGCCGTTGAAAGATGACGTCGTCGGCGATATCGGAAGGGTTCTTTGGTTGATTATGGGAGCTGTCGGAA TCATCCTGCTGATCGCCTGCGCGAACGTTGCCAACCTCTTGTTGGTCAGAGCCGAATCGCGTCAGTATGAACGCGGTATC CGGATGGCCCTCGGCGCGGCCCGTGCGCAAATCCTGCGAGAGTCGCTCGCCGAAAGCCTCTTGCTAGGCGCCGCTGGCGG TCTGCTCGGCTTAGCCTTGGCGTATGCCGGAATCCGTCTGTTGCGCTTCATGAACCCGGGAAATCTGCCTCGCCTTCAGG AGATCTCCATCGACGCCTCCGTTCTCCTGTTCGCACTTGCCACGTCGCTCTTTTCGTGTCTTCTGTTTGGACTGCTTCCA GCTCTGAAATACGCGACATCCCAACCTGCCCCGGCCTTGCGCCTCGGTGGCGTTTCAGCCGGTACCACCCGCCGGCGCCA TCGCGCGCAGAATCTACTGCTGGTGGGGCAGATCTCGCTCGCAGTGGTTCTTCTGGTGACATCGGGCTTGATGCTGCGCA CTTTTCAGGAGCTTCGTAAGGTGCGGCCGGGCTTCACAAACCCGCGGCAGGTTCAGGTCTTTGGCCTCGCGATTCCCGCG CAGGTAGAGCAACCGGAACGTGTCGTGCGCGTGTGGAACGACATCGTGGAAAGACTCGCCGCCATTCCCGGAGTCTCGGG GGCAGGTATGGCGAATTCCGTTCCGATGGACGACACCCGGAACCAAAACCCGATAATCGCGGATAACAGCGACCCCGGGC TGAACCCGCCCATTCGAAACTTCAAATTTGTGTCGCCTGGATTCCTGGCGGCTACCGGAACCCGCGTCATTGCCGGTCGC GATCTCGCTTGGGCCGATATCTACGACCGTCATTCGGTCGTCCTCGTTTCCGAAAATCTCGCCCGCGAACTTTGGGGCTC TCCTGCGGCCGCGGTCGGCAAACGGCTTCACGAGAGGAGCAACAAAATCCAGTGGCGCGAGGTCGTGGGCGTCGTCGAGA ACGTGCGCGATGATGGCATCCAACAGCTACCGCCGGCAACCGTTTACTGGCCGTTTGCGATTCCCAATTTCAACGGAACA CCGTTGCATGTTCAACGCGATGCAGAGTTCGCCGTCCGCAGTCCCGCTGCGGGAACGGAAGTTTTCCTGAAGCAGGTCCG GCAAGCCGTTGCTGCGATAGACCCCAACTCGCCCGTAGTCCGCCCTCGTACCCTACAGCAAATCTACGGCGGCTCCATGG CGCAGACGTCTTTTGCGCTGGTCATGCTGGCCACCGCCGGAGTGATGGCCCTCGTTTTGGGCGTAGTAGGCCTCTATGGT GTAATCGCATATACCGTCGAACAACGGCGGCGCGAAGTCGGCATTCGCATGGCGCTCGGCGCGCCTGCGGCTGCGGTGAA ACGGATGTTTCTCTGCCGTGGCTTGTTGCTCGCATGCGTGGGCATCGCTTTGGGGCTGGCAGCCGCGGCAGCATTGTCAC GCCTGATGTCTTCGCTGCTATTTGGCGTAACAGAGTTCGACCCCGCGACCTATGTTGTTACCGTCATAGTGCTGCTTGTC GCGGCGATGCTCGCCACTTACATTCCCGCGCGCCGCGCGGCTTCGCTGGATCCAATGGCTACGCTTCGAGGCGAGTAA
Upstream 100 bases:
>100_bases CGCGCGCACCGTAAAGTCCGATTAGTCACTCTGATCAGCCCTCGTCGAAAAAACCCATGGGTCATAACAGCGACAATTGC CCATAGAATTCAGGTGCTAC
Downstream 100 bases:
>100_bases ACCCAGTCACAGCAACTTAAAATAAATTATCTAGAACTAAATTACTTGTTATCAGCAACTTACTAAATCTCGCACCGCTT CGCCCCCCTTGCGCTCACGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 825; Mature: 825
Protein sequence:
>825_residues MNIESLSTALRYWVRTLRREPMFTAAATLTLALGIGATTAIFSVVNGVLIKPLPYPAADELLSISHFAPGMGFAQPIGIS PSMLFTYREEGHVFQSIGAWSPDAATVTGLAEPERVPTVRITLGTLQVLRVPPLIGRWPSQEDDTEGAPEVILLSYGYWQ RRFGGDPSVVGRGITVDSRPRQIIGVMPPSYFRLMSQDPDLFIPMRFDRNRLHLGDLGFLGIARLKPGVSLAQANSDVAR MLPIWLRSWPGPNANFGREVFEQARFSPALRPLKDDVVGDIGRVLWLIMGAVGIILLIACANVANLLLVRAESRQYERGI RMALGAARAQILRESLAESLLLGAAGGLLGLALAYAGIRLLRFMNPGNLPRLQEISIDASVLLFALATSLFSCLLFGLLP ALKYATSQPAPALRLGGVSAGTTRRRHRAQNLLLVGQISLAVVLLVTSGLMLRTFQELRKVRPGFTNPRQVQVFGLAIPA QVEQPERVVRVWNDIVERLAAIPGVSGAGMANSVPMDDTRNQNPIIADNSDPGLNPPIRNFKFVSPGFLAATGTRVIAGR DLAWADIYDRHSVVLVSENLARELWGSPAAAVGKRLHERSNKIQWREVVGVVENVRDDGIQQLPPATVYWPFAIPNFNGT PLHVQRDAEFAVRSPAAGTEVFLKQVRQAVAAIDPNSPVVRPRTLQQIYGGSMAQTSFALVMLATAGVMALVLGVVGLYG VIAYTVEQRRREVGIRMALGAPAAAVKRMFLCRGLLLACVGIALGLAAAAALSRLMSSLLFGVTEFDPATYVVTVIVLLV AAMLATYIPARRAASLDPMATLRGE
Sequences:
>Translated_825_residues MNIESLSTALRYWVRTLRREPMFTAAATLTLALGIGATTAIFSVVNGVLIKPLPYPAADELLSISHFAPGMGFAQPIGIS PSMLFTYREEGHVFQSIGAWSPDAATVTGLAEPERVPTVRITLGTLQVLRVPPLIGRWPSQEDDTEGAPEVILLSYGYWQ RRFGGDPSVVGRGITVDSRPRQIIGVMPPSYFRLMSQDPDLFIPMRFDRNRLHLGDLGFLGIARLKPGVSLAQANSDVAR MLPIWLRSWPGPNANFGREVFEQARFSPALRPLKDDVVGDIGRVLWLIMGAVGIILLIACANVANLLLVRAESRQYERGI RMALGAARAQILRESLAESLLLGAAGGLLGLALAYAGIRLLRFMNPGNLPRLQEISIDASVLLFALATSLFSCLLFGLLP ALKYATSQPAPALRLGGVSAGTTRRRHRAQNLLLVGQISLAVVLLVTSGLMLRTFQELRKVRPGFTNPRQVQVFGLAIPA QVEQPERVVRVWNDIVERLAAIPGVSGAGMANSVPMDDTRNQNPIIADNSDPGLNPPIRNFKFVSPGFLAATGTRVIAGR DLAWADIYDRHSVVLVSENLARELWGSPAAAVGKRLHERSNKIQWREVVGVVENVRDDGIQQLPPATVYWPFAIPNFNGT PLHVQRDAEFAVRSPAAGTEVFLKQVRQAVAAIDPNSPVVRPRTLQQIYGGSMAQTSFALVMLATAGVMALVLGVVGLYG VIAYTVEQRRREVGIRMALGAPAAAVKRMFLCRGLLLACVGIALGLAAAAALSRLMSSLLFGVTEFDPATYVVTVIVLLV AAMLATYIPARRAASLDPMATLRGE >Mature_825_residues MNIESLSTALRYWVRTLRREPMFTAAATLTLALGIGATTAIFSVVNGVLIKPLPYPAADELLSISHFAPGMGFAQPIGIS PSMLFTYREEGHVFQSIGAWSPDAATVTGLAEPERVPTVRITLGTLQVLRVPPLIGRWPSQEDDTEGAPEVILLSYGYWQ RRFGGDPSVVGRGITVDSRPRQIIGVMPPSYFRLMSQDPDLFIPMRFDRNRLHLGDLGFLGIARLKPGVSLAQANSDVAR MLPIWLRSWPGPNANFGREVFEQARFSPALRPLKDDVVGDIGRVLWLIMGAVGIILLIACANVANLLLVRAESRQYERGI RMALGAARAQILRESLAESLLLGAAGGLLGLALAYAGIRLLRFMNPGNLPRLQEISIDASVLLFALATSLFSCLLFGLLP ALKYATSQPAPALRLGGVSAGTTRRRHRAQNLLLVGQISLAVVLLVTSGLMLRTFQELRKVRPGFTNPRQVQVFGLAIPA QVEQPERVVRVWNDIVERLAAIPGVSGAGMANSVPMDDTRNQNPIIADNSDPGLNPPIRNFKFVSPGFLAATGTRVIAGR DLAWADIYDRHSVVLVSENLARELWGSPAAAVGKRLHERSNKIQWREVVGVVENVRDDGIQQLPPATVYWPFAIPNFNGT PLHVQRDAEFAVRSPAAGTEVFLKQVRQAVAAIDPNSPVVRPRTLQQIYGGSMAQTSFALVMLATAGVMALVLGVVGLYG VIAYTVEQRRREVGIRMALGAPAAAVKRMFLCRGLLLACVGIALGLAAAAALSRLMSSLLFGVTEFDPATYVVTVIVLLV AAMLATYIPARRAASLDPMATLRGE
Specific function: Part of the ABC transporter complex MacAB involved in macrolide export. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation [H]
COG id: COG0577
COG function: function code V; ABC-type antimicrobial peptide transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Escherichia coli, GI1787105, Length=276, Percent_Identity=27.1739130434783, Blast_Score=70, Evalue=4e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR017911 - InterPro: IPR003593 - InterPro: IPR003838 [H]
Pfam domain/function: PF00005 ABC_tran; PF02687 FtsX [H]
EC number: NA
Molecular weight: Translated: 89236; Mature: 89236
Theoretical pI: Translated: 10.47; Mature: 10.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIESLSTALRYWVRTLRREPMFTAAATLTLALGIGATTAIFSVVNGVLIKPLPYPAADE CCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCEECCCCCCCHHH LLSISHFAPGMGFAQPIGISPSMLFTYREEGHVFQSIGAWSPDAATVTGLAEPERVPTVR HHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCHHHCCCCCCCCCEEECCCCCCCCCEEE ITLGTLQVLRVPPLIGRWPSQEDDTEGAPEVILLSYGYWQRRFGGDPSVVGRGITVDSRP EEHHHHHHHHCCCHHCCCCCCCCCCCCCCCEEEEECCHHHHHCCCCHHHCCCCCEECCCC RQIIGVMPPSYFRLMSQDPDLFIPMRFDRNRLHLGDLGFLGIARLKPGVSLAQANSDVAR CEEEECCCHHHHHHHCCCCCEEEEEEECCCEEEECCCCHHHHHHCCCCCHHHHCCCHHHH MLPIWLRSWPGPNANFGREVFEQARFSPALRPLKDDVVGDIGRVLWLIMGAVGIILLIAC HHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH ANVANLLLVRAESRQYERGIRMALGAARAQILRESLAESLLLGAAGGLLGLALAYAGIRL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LRFMNPGNLPRLQEISIDASVLLFALATSLFSCLLFGLLPALKYATSQPAPALRLGGVSA HHHCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCC GTTRRRHRAQNLLLVGQISLAVVLLVTSGLMLRTFQELRKVRPGFTNPRQVQVFGLAIPA CCHHHHHHHHCEEEEHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCEEEEEEEECCC QVEQPERVVRVWNDIVERLAAIPGVSGAGMANSVPMDDTRNQNPIIADNSDPGLNPPIRN CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCC FKFVSPGFLAATGTRVIAGRDLAWADIYDRHSVVLVSENLARELWGSPAAAVGKRLHERS CEECCCCCEEECCCEEEECCCCCHHHHCCCCCEEEECHHHHHHHHCCCHHHHHHHHHHHH NKIQWREVVGVVENVRDDGIQQLPPATVYWPFAIPNFNGTPLHVQRDAEFAVRSPAAGTE CCCHHHHHHHHHHHHHHCCHHHCCCCEEEECEECCCCCCCCEEEECCCCHHCCCCCCCHH VFLKQVRQAVAAIDPNSPVVRPRTLQQIYGGSMAQTSFALVMLATAGVMALVLGVVGLYG HHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH VIAYTVEQRRREVGIRMALGAPAAAVKRMFLCRGLLLACVGIALGLAAAAALSRLMSSLL HHHHHHHHHHHHHCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FGVTEFDPATYVVTVIVLLVAAMLATYIPARRAASLDPMATLRGE HCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCHHCCCC >Mature Secondary Structure MNIESLSTALRYWVRTLRREPMFTAAATLTLALGIGATTAIFSVVNGVLIKPLPYPAADE CCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCEECCCCCCCHHH LLSISHFAPGMGFAQPIGISPSMLFTYREEGHVFQSIGAWSPDAATVTGLAEPERVPTVR HHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCHHHCCCCCCCCCEEECCCCCCCCCEEE ITLGTLQVLRVPPLIGRWPSQEDDTEGAPEVILLSYGYWQRRFGGDPSVVGRGITVDSRP EEHHHHHHHHCCCHHCCCCCCCCCCCCCCCEEEEECCHHHHHCCCCHHHCCCCCEECCCC RQIIGVMPPSYFRLMSQDPDLFIPMRFDRNRLHLGDLGFLGIARLKPGVSLAQANSDVAR CEEEECCCHHHHHHHCCCCCEEEEEEECCCEEEECCCCHHHHHHCCCCCHHHHCCCHHHH MLPIWLRSWPGPNANFGREVFEQARFSPALRPLKDDVVGDIGRVLWLIMGAVGIILLIAC HHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH ANVANLLLVRAESRQYERGIRMALGAARAQILRESLAESLLLGAAGGLLGLALAYAGIRL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LRFMNPGNLPRLQEISIDASVLLFALATSLFSCLLFGLLPALKYATSQPAPALRLGGVSA HHHCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCC GTTRRRHRAQNLLLVGQISLAVVLLVTSGLMLRTFQELRKVRPGFTNPRQVQVFGLAIPA CCHHHHHHHHCEEEEHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCEEEEEEEECCC QVEQPERVVRVWNDIVERLAAIPGVSGAGMANSVPMDDTRNQNPIIADNSDPGLNPPIRN CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCC FKFVSPGFLAATGTRVIAGRDLAWADIYDRHSVVLVSENLARELWGSPAAAVGKRLHERS CEECCCCCEEECCCEEEECCCCCHHHHCCCCCEEEECHHHHHHHHCCCHHHHHHHHHHHH NKIQWREVVGVVENVRDDGIQQLPPATVYWPFAIPNFNGTPLHVQRDAEFAVRSPAAGTE CCCHHHHHHHHHHHHHHCCHHHCCCCEEEECEECCCCCCCCEEEECCCCHHCCCCCCCHH VFLKQVRQAVAAIDPNSPVVRPRTLQQIYGGSMAQTSFALVMLATAGVMALVLGVVGLYG HHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH VIAYTVEQRRREVGIRMALGAPAAAVKRMFLCRGLLLACVGIALGLAAAAALSRLMSSLL HHHHHHHHHHHHHCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FGVTEFDPATYVVTVIVLLVAAMLATYIPARRAASLDPMATLRGE HCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10688204 [H]