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The map label for this gene is scpA [H]

Identifier: 116625542

GI number: 116625542

Start: 8135501

End: 8136292

Strand: Direct

Name: scpA [H]

Synonym: Acid_6489

Alternate gene names: 116625542

Gene position: 8135501-8136292 (Clockwise)

Preceding gene: 116625526

Following gene: 116625543

Centisome position: 81.64

GC content: 56.69

Gene sequence:

>792_bases
GTGTCATCATCGCCGCTCAATTTCCATTTGGAGCAATATGACGGGCCTCTCGACCTGCTGCTCGATCTGATCCGCAAGCA
ACAGATCGACATCAAGGACATCCCGATCGCCACCATTACTTCTCAATACCTGGAGTATATGGACAAGGCGCGCGAGATGG
ATATCGATCTGGGCGCCGAATTCGTCTATATGGCGGCGACGCTGATCCACATCAAGTCCAAGATGCTCCTGCCGCGCGAC
CCGGCGCTCGCCCCTGAAGGCGAAACCCCGGAAGATCCCCGACAGGAACTGGTGGACCGCCTCCTCGAGCACGAGCGCTT
CAAGAATGCCGCGGAAATGCTGCAGCAGAAGCGCATGATCGAGGAGAACGTCTGGAGCAACCCGCAGATCAAAGCCTTCA
TTTCCGAAGACGACGATCCCGGGCTTGCGATTACGCTCTTCGACCTGGTAAAAGCTTTCGGCGAAATGCTGGAGCGCGTA
AAGAATCGCCCGATTTACGAAGTGGAATCGGCCGATGTTACGGTGAGCGATATGATCCGCTATCTGCGGGATCAGTTTCG
CGAAGTGGGCGAAGACCAGCCGGTCTTCATCATGCGCATCTTCGAAATGCAGCGCACCCGGCGCGCCATGATCGCGTTGT
TCCTGGGCGTCCTCGAAATGGTGCGGATGCAGGCGGTGATCGTAACCCAAAAGGATCTTTTCGGCGAAATCGCCCTCAAG
CGGCATAGCAGTTTCGACGCGGTCTTCGCGACGGACCAGCCGATGTCCGCCATCGAAAAAGACTACATCTGA

Upstream 100 bases:

>100_bases
GTATGGTTCACCCGTTAATCTCTCTTATGATTATGTATCACAAAGGACGGTGGCCGGGCGCTGCTGGCATGGCCTTCGCC
GCATGCTATCGTGAAGGATA

Downstream 100 bases:

>100_bases
TCAAGCAATGGAAGACAAGGAATTCACTCCTGAGGGCGTAAGCCCGGAACCTGAACCGGTACAACCGGCAGAAGAAATCG
CGGCCGAAGCGGTCGTAGCG

Product: condensin subunit ScpA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 263; Mature: 262

Protein sequence:

>263_residues
MSSSPLNFHLEQYDGPLDLLLDLIRKQQIDIKDIPIATITSQYLEYMDKAREMDIDLGAEFVYMAATLIHIKSKMLLPRD
PALAPEGETPEDPRQELVDRLLEHERFKNAAEMLQQKRMIEENVWSNPQIKAFISEDDDPGLAITLFDLVKAFGEMLERV
KNRPIYEVESADVTVSDMIRYLRDQFREVGEDQPVFIMRIFEMQRTRRAMIALFLGVLEMVRMQAVIVTQKDLFGEIALK
RHSSFDAVFATDQPMSAIEKDYI

Sequences:

>Translated_263_residues
MSSSPLNFHLEQYDGPLDLLLDLIRKQQIDIKDIPIATITSQYLEYMDKAREMDIDLGAEFVYMAATLIHIKSKMLLPRD
PALAPEGETPEDPRQELVDRLLEHERFKNAAEMLQQKRMIEENVWSNPQIKAFISEDDDPGLAITLFDLVKAFGEMLERV
KNRPIYEVESADVTVSDMIRYLRDQFREVGEDQPVFIMRIFEMQRTRRAMIALFLGVLEMVRMQAVIVTQKDLFGEIALK
RHSSFDAVFATDQPMSAIEKDYI
>Mature_262_residues
SSSPLNFHLEQYDGPLDLLLDLIRKQQIDIKDIPIATITSQYLEYMDKAREMDIDLGAEFVYMAATLIHIKSKMLLPRDP
ALAPEGETPEDPRQELVDRLLEHERFKNAAEMLQQKRMIEENVWSNPQIKAFISEDDDPGLAITLFDLVKAFGEMLERVK
NRPIYEVESADVTVSDMIRYLRDQFREVGEDQPVFIMRIFEMQRTRRAMIALFLGVLEMVRMQAVIVTQKDLFGEIALKR
HSSFDAVFATDQPMSAIEKDYI

Specific function: Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing smc and scpB that pull DNA away from mid-cell into both cell halves [H]

COG id: COG1354

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm. Note=Associated with two foci at the outer edges of the nucleoid region in young cells, and at four foci within both cell halves in older cells (By similarity) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the scpA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003768 [H]

Pfam domain/function: PF02616 ScpA_ScpB [H]

EC number: NA

Molecular weight: Translated: 30492; Mature: 30360

Theoretical pI: Translated: 4.48; Mature: 4.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.7 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSSPLNFHLEQYDGPLDLLLDLIRKQQIDIKDIPIATITSQYLEYMDKAREMDIDLGAE
CCCCCCEEEHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHH
FVYMAATLIHIKSKMLLPRDPALAPEGETPEDPRQELVDRLLEHERFKNAAEMLQQKRMI
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EENVWSNPQIKAFISEDDDPGLAITLFDLVKAFGEMLERVKNRPIYEVESADVTVSDMIR
HHHCCCCCCEEEEECCCCCCCCEEHHHHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHH
YLRDQFREVGEDQPVFIMRIFEMQRTRRAMIALFLGVLEMVRMQAVIVTQKDLFGEIALK
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RHSSFDAVFATDQPMSAIEKDYI
HCCCCCEEEECCCCHHHHHHCCC
>Mature Secondary Structure 
SSSPLNFHLEQYDGPLDLLLDLIRKQQIDIKDIPIATITSQYLEYMDKAREMDIDLGAE
CCCCCEEEHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHH
FVYMAATLIHIKSKMLLPRDPALAPEGETPEDPRQELVDRLLEHERFKNAAEMLQQKRMI
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EENVWSNPQIKAFISEDDDPGLAITLFDLVKAFGEMLERVKNRPIYEVESADVTVSDMIR
HHHCCCCCCEEEEECCCCCCCCEEHHHHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHH
YLRDQFREVGEDQPVFIMRIFEMQRTRRAMIALFLGVLEMVRMQAVIVTQKDLFGEIALK
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RHSSFDAVFATDQPMSAIEKDYI
HCCCCCEEEECCCCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA