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The map label for this gene is 116625539

Identifier: 116625539

GI number: 116625539

Start: 8129963

End: 8131270

Strand: Reverse

Name: 116625539

Synonym: Acid_6486

Alternate gene names: NA

Gene position: 8131270-8129963 (Counterclockwise)

Preceding gene: 116625540

Following gene: 116625538

Centisome position: 81.59

GC content: 60.32

Gene sequence:

>1308_bases
ATGCCATCCAAGGACCAACGGCCCAGCCAGCGACTGGGAAAATCGAACCCGCGAAGGGTCAAGATCATCACCTGGACCCT
CATGCTCGGATTGTTCGGCGGCGGGGCTTACGCCGCCTACCGTTACACCGGCACCACCGAAGTGGAAGTGCCCGTGTCCC
GCGTGCGGCGCGGGGAGTTTATCATCAGCGTGCGCACCCGCGGCGACATCAAGAGCGCGCGTTCCCTGATTCTCAAAGCC
CCACAGGTGCCCGGCCTGCGCATTGTGCGCCTGGCGACCGCGGGACGTCCCGTGAAAAAGGGCGACGTAGTGGTGGAGTT
CGATGGTTCTCAGCAGGATCAGAACGTGATCAGCAGGACCACGACCGTGCGTGCCGCCGATGGCGACATCGTGCAGACCA
AGGCGACGCAGAAGATCGACGACGAAGCCGACTCGATGAATAAGATGTCGAGCGAGTACGATCTGGAGCGAGCCAAACTG
GATGCCAGCAAGGCGGAAGTGCTCTCGGCCATTGAAGGCGAGAAGAATCGCATTCAGGTGGGAGTTTCCGAAGGTTCGCT
GCAGACGGTGAAGGCCTCGATCAACGCGCACCAGGTAGGTCACGAGGCGGACTTGAGCCGGCTCAACCAGCGCAAGGACA
AAGCGGTTCGCGATCTGAATACGGCGCAAGGGTATCTCGGCATGATGCAGTTGAAGGCGCCGATTGACGGCATCGTTAAC
GTGCTGCCGAATTTCCGGTCGCAGGGGTCGTTCGGTCAGGCCACGCCGCCGTTCAAGGAAGGCGACAACGCGTGGACCGG
CGCCGAGATCGCGGAAATCCCGGATCTTTCCCAGATGTTTGTGGATTTGAAGCTGGAAGAAGTGGACCGGGGCAAACTCC
GTCTCGGCCAATCCGTACGGATCCGGGTGGACGCGATTCCGGACCGCGAATTCACGGCGACGCTGGATTGGATCAGCCCG
ATCGCGGCGCTGGTTTTCAAGGGCGGATCGACCGCGGAAAAAACCTTTCCCGCGCGTGCCACCATCACCAAACTGGACGA
CCGGCTGAGGCCGGGCATGAGCGCATCCACGGAAATTATCATCGAGCGCGAGGCCAATACGCTGCTGATTCCTACGCGTG
CCAGTTTTGCCAAGGACGGAAAACCGGCGGTCTTCATTCAGTCGGGCAAATCGTTTGCGATACGCCCGATCGAAGTCGGC
AAGCAGAACGACGACGACGTGATCGTGACCGGGGGGTTGAAAGAGGGTGACATCGTTACCCTGGAAAATCCCGCCGAATC
GGCCAAGCGAGCGAAGAAGAAAATGTAA

Upstream 100 bases:

>100_bases
CAATTTCACGACCGTGGCGATCAAGTCCGGCGTGCAGAAAGGGGACGTCATCGCGCTGCAACGTCCCATGTAGGGCGCGC
GCTACCGACAGGAATAACCC

Downstream 100 bases:

>100_bases
AGGCGCCGGAGGGCTGCTGTTGTCTCGCAAGCCGCCGGCATTGATTCCGATCTTCCATGAAAAAGGCAATATTCCGCACG
TTGATGTTGGTCATCCTGGC

Product: RND family efflux transporter MFP subunit

Products: NA

Alternate protein names: Membrane-Fusion Protein; RND Family Efflux Transporter MFP Subunit; Secretion Protein HlyD; HlyD Family Secretion Protein; Multidrug Resistance Efflux Pump-Like Protein; Secretion Protein HlyD Family Protein; Macrolide-Specific Efflux Protein MacA; Acr Family Acridine Efflux Pump AcrA; Efflux System Component RND Family; Membrane Permease Cation Efflux Pumps; Macrolide-Specific Efflux Protein; Secretion Protein HlyD-Like Protein; Efflux Transporter; Secretion Protein Putative RND Family Efflux Protein; Secretion Protein; PAS/PAC Sensor Protein; Biotin/Lipoyl Attachment Domain-Containing Protein; Efflux Transporter Rnd Family Mfp Subunit; RND Family Efflux Transporter; Membrane-Fusion Protein-Like Protein

Number of amino acids: Translated: 435; Mature: 434

Protein sequence:

>435_residues
MPSKDQRPSQRLGKSNPRRVKIITWTLMLGLFGGGAYAAYRYTGTTEVEVPVSRVRRGEFIISVRTRGDIKSARSLILKA
PQVPGLRIVRLATAGRPVKKGDVVVEFDGSQQDQNVISRTTTVRAADGDIVQTKATQKIDDEADSMNKMSSEYDLERAKL
DASKAEVLSAIEGEKNRIQVGVSEGSLQTVKASINAHQVGHEADLSRLNQRKDKAVRDLNTAQGYLGMMQLKAPIDGIVN
VLPNFRSQGSFGQATPPFKEGDNAWTGAEIAEIPDLSQMFVDLKLEEVDRGKLRLGQSVRIRVDAIPDREFTATLDWISP
IAALVFKGGSTAEKTFPARATITKLDDRLRPGMSASTEIIIEREANTLLIPTRASFAKDGKPAVFIQSGKSFAIRPIEVG
KQNDDDVIVTGGLKEGDIVTLENPAESAKRAKKKM

Sequences:

>Translated_435_residues
MPSKDQRPSQRLGKSNPRRVKIITWTLMLGLFGGGAYAAYRYTGTTEVEVPVSRVRRGEFIISVRTRGDIKSARSLILKA
PQVPGLRIVRLATAGRPVKKGDVVVEFDGSQQDQNVISRTTTVRAADGDIVQTKATQKIDDEADSMNKMSSEYDLERAKL
DASKAEVLSAIEGEKNRIQVGVSEGSLQTVKASINAHQVGHEADLSRLNQRKDKAVRDLNTAQGYLGMMQLKAPIDGIVN
VLPNFRSQGSFGQATPPFKEGDNAWTGAEIAEIPDLSQMFVDLKLEEVDRGKLRLGQSVRIRVDAIPDREFTATLDWISP
IAALVFKGGSTAEKTFPARATITKLDDRLRPGMSASTEIIIEREANTLLIPTRASFAKDGKPAVFIQSGKSFAIRPIEVG
KQNDDDVIVTGGLKEGDIVTLENPAESAKRAKKKM
>Mature_434_residues
PSKDQRPSQRLGKSNPRRVKIITWTLMLGLFGGGAYAAYRYTGTTEVEVPVSRVRRGEFIISVRTRGDIKSARSLILKAP
QVPGLRIVRLATAGRPVKKGDVVVEFDGSQQDQNVISRTTTVRAADGDIVQTKATQKIDDEADSMNKMSSEYDLERAKLD
ASKAEVLSAIEGEKNRIQVGVSEGSLQTVKASINAHQVGHEADLSRLNQRKDKAVRDLNTAQGYLGMMQLKAPIDGIVNV
LPNFRSQGSFGQATPPFKEGDNAWTGAEIAEIPDLSQMFVDLKLEEVDRGKLRLGQSVRIRVDAIPDREFTATLDWISPI
AALVFKGGSTAEKTFPARATITKLDDRLRPGMSASTEIIIEREANTLLIPTRASFAKDGKPAVFIQSGKSFAIRPIEVGK
QNDDDVIVTGGLKEGDIVTLENPAESAKRAKKKM

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47512; Mature: 47381

Theoretical pI: Translated: 10.18; Mature: 10.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSKDQRPSQRLGKSNPRRVKIITWTLMLGLFGGGAYAAYRYTGTTEVEVPVSRVRRGEF
CCCCCCCHHHHHCCCCCCEEEEEEEEHHHHHCCCCEEEEEEECCCEEEECCHHHCCCCCE
IISVRTRGDIKSARSLILKAPQVPGLRIVRLATAGRPVKKGDVVVEFDGSQQDQNVISRT
EEEEECCCCHHHHHHHHEECCCCCCEEEEEEECCCCCCCCCCEEEEECCCCCHHHHHHHH
TTVRAADGDIVQTKATQKIDDEADSMNKMSSEYDLERAKLDASKAEVLSAIEGEKNRIQV
EEEEECCCCEEECCCHHHHCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCEEEE
GVSEGSLQTVKASINAHQVGHEADLSRLNQRKDKAVRDLNTAQGYLGMMQLKAPIDGIVN
EECCCCCEEEEEHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHH
VLPNFRSQGSFGQATPPFKEGDNAWTGAEIAEIPDLSQMFVDLKLEEVDRGKLRLGQSVR
HHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHEEEHHHCCCCCEECCCEEE
IRVDAIPDREFTATLDWISPIAALVFKGGSTAEKTFPARATITKLDDRLRPGMSASTEII
EEEEECCCCCCEEEHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEE
IEREANTLLIPTRASFAKDGKPAVFIQSGKSFAIRPIEVGKQNDDDVIVTGGLKEGDIVT
EEECCCEEEEECCHHHCCCCCCEEEEECCCCEEEEEEECCCCCCCCEEEECCCCCCCEEE
LENPAESAKRAKKKM
ECCCHHHHHHHHHCC
>Mature Secondary Structure 
PSKDQRPSQRLGKSNPRRVKIITWTLMLGLFGGGAYAAYRYTGTTEVEVPVSRVRRGEF
CCCCCCHHHHHCCCCCCEEEEEEEEHHHHHCCCCEEEEEEECCCEEEECCHHHCCCCCE
IISVRTRGDIKSARSLILKAPQVPGLRIVRLATAGRPVKKGDVVVEFDGSQQDQNVISRT
EEEEECCCCHHHHHHHHEECCCCCCEEEEEEECCCCCCCCCCEEEEECCCCCHHHHHHHH
TTVRAADGDIVQTKATQKIDDEADSMNKMSSEYDLERAKLDASKAEVLSAIEGEKNRIQV
EEEEECCCCEEECCCHHHHCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCEEEE
GVSEGSLQTVKASINAHQVGHEADLSRLNQRKDKAVRDLNTAQGYLGMMQLKAPIDGIVN
EECCCCCEEEEEHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHH
VLPNFRSQGSFGQATPPFKEGDNAWTGAEIAEIPDLSQMFVDLKLEEVDRGKLRLGQSVR
HHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHEEEHHHCCCCCEECCCEEE
IRVDAIPDREFTATLDWISPIAALVFKGGSTAEKTFPARATITKLDDRLRPGMSASTEII
EEEEECCCCCCEEEHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEE
IEREANTLLIPTRASFAKDGKPAVFIQSGKSFAIRPIEVGKQNDDDVIVTGGLKEGDIVT
EEECCCEEEEECCHHHCCCCCCEEEEECCCCEEEEEEECCCCCCCCEEEECCCCCCCEEE
LENPAESAKRAKKKM
ECCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA