Click here to switch to the map view.

The map label for this gene is 116625535

Identifier: 116625535

GI number: 116625535

Start: 8123635

End: 8124906

Strand: Reverse

Name: 116625535

Synonym: Acid_6482

Alternate gene names: NA

Gene position: 8124906-8123635 (Counterclockwise)

Preceding gene: 116625536

Following gene: 116625534

Centisome position: 81.53

GC content: 57.7

Gene sequence:

>1272_bases
ATGGATATACCTCGTAAAGACGCCAGTAGAAAGCGGCTGATCCGCCGGATTGCAATTGGGATCGTGGTGATCATTGCCGC
AGTCGGTATTAGTCTGGGGGTCTCGCGCCTCAAGCCGGCGGCGCCCTCGGTGGATCTCTCCGTGGTGTGGCGGGATACCG
TCAAGCGCGGGCCCATGACCCGGGAAGTTCGCGGTCTGGGTACCCTGGTACCCGAAGAAACCATGCTCGTTCCTGCCACC
ACTGAGGGCAGGGTACAGCGCATCATTATCCGGCCTGGTACGCCGGTGAAGGCCGATTCCGTGGTGATGATCCTGACCAG
CCCCGAGCTGGAGACCGATTTGTTGAACGCGGAATATGCGCTCAAGGCGGCCGAAGCCGACTACGCGAACCTGAAAGTGA
CGCTGCAGAAACTCCAACTCGATATGAAGTCCACCGTGGCGCAGGTTGGCGCCGACTTCAACACGTCGAAGCTTCAGGCG
GATCGCGACTCGGCGCTGGCCAAAGAGGGTCTTTTCAGTGAAGTCGATGCCAAGATCTCGGCGGTGAAGGCTCAGGAACT
CGGCAACCGCCTGGACATTGAAAAGGAACGTATCAACATCAGCGCGTCGGCCGAGGAAGCGCAGTTGGCCTCCCAGAAGG
TCAAAGTGGACCAGCTCCGCGGGCAATTCAACCTGAAGAAGAGTCAGGTCGAGCAGCTCAAGGTGAGAGCCGGCTTCGAC
GGTGTGTTGCAGCAGCTCCCGACGCCGGTCGAGGTCGGTCAGAAGGTTGCCGCCGGGACGCCGCTCGGGAAGATCGCCCA
GCCTTCCAAGCTGAAAGCGGAACTGAAGATCGCCGAAACACAAGTAAAAGATGTAACGATTGGTCAACACGCGGTGATCG
ACACGCGTAATGGTCTTATTGAAGGGCGTGTTTCGCGCATCGATCCTTCCATTTTGAATGGGACGGTGACGGTGGATGTG
GCGCTCCTGCCTACCAAGGACGGTCCGCCGGCCGGTGTCCTTCGGCCCGATCTGAGCGTGGACGGCACCATCGAGTTGGA
ACGATTGAACGATGTGGTTTTCGTGGGACGGCCGGTCTTCGGGCAGCAGGATAGTACGGTAACGCTCTTCAAGCTGGAAC
CGGACGGTAAATACGCGAACAAGATCAAGGTCGTATTGGGCCGCAGTTCGGTGAACACGATTGAGATCAAGGACGGTCTC
AAAGTCGGCGATCAGGTAATCCTATCCGATATGTCGGCTTACGATAGTTACGAACGAATTAAATTGAACTAA

Upstream 100 bases:

>100_bases
CACCTCAAATTCACTCCTATCCGCCTTACCCCCTGAAACGTCATATGTTACGCTGGACGGCGATTGGCAGGCGCCGTGCC
CATATGGCGTAAGAACTCAA

Downstream 100 bases:

>100_bases
CTTTTCTCTACTTTCGTAGAAGGGGTAAATGACTATGGACAACGGCTCGCAACCGCTGATTCGACTGGACGCAGTGAGCA
AAGTCTTCGTGACGGACGAA

Product: RND family efflux transporter MFP subunit

Products: NA

Alternate protein names: Efflux Transporter RND Family MFP Subunit; ABC Transporter Permease; Efflux Transporter Rnd Family Mfp Subunit; Efflux Transporter MFP Component RND Family; HlyD Family Secretion Protein; Efflux Transporter MFP Subunit; Secretion Protein HlyD Family Protein; Secretion Protein HlyD; Efflux Transporter MFP Component RND Family Protein; Membrane-Fusion Protein; Membrane Fusion Protein; Peptidase; Efflux Transporter; HlyD Family Transporter Protein; HlyD Family Transporter

Number of amino acids: Translated: 423; Mature: 423

Protein sequence:

>423_residues
MDIPRKDASRKRLIRRIAIGIVVIIAAVGISLGVSRLKPAAPSVDLSVVWRDTVKRGPMTREVRGLGTLVPEETMLVPAT
TEGRVQRIIIRPGTPVKADSVVMILTSPELETDLLNAEYALKAAEADYANLKVTLQKLQLDMKSTVAQVGADFNTSKLQA
DRDSALAKEGLFSEVDAKISAVKAQELGNRLDIEKERINISASAEEAQLASQKVKVDQLRGQFNLKKSQVEQLKVRAGFD
GVLQQLPTPVEVGQKVAAGTPLGKIAQPSKLKAELKIAETQVKDVTIGQHAVIDTRNGLIEGRVSRIDPSILNGTVTVDV
ALLPTKDGPPAGVLRPDLSVDGTIELERLNDVVFVGRPVFGQQDSTVTLFKLEPDGKYANKIKVVLGRSSVNTIEIKDGL
KVGDQVILSDMSAYDSYERIKLN

Sequences:

>Translated_423_residues
MDIPRKDASRKRLIRRIAIGIVVIIAAVGISLGVSRLKPAAPSVDLSVVWRDTVKRGPMTREVRGLGTLVPEETMLVPAT
TEGRVQRIIIRPGTPVKADSVVMILTSPELETDLLNAEYALKAAEADYANLKVTLQKLQLDMKSTVAQVGADFNTSKLQA
DRDSALAKEGLFSEVDAKISAVKAQELGNRLDIEKERINISASAEEAQLASQKVKVDQLRGQFNLKKSQVEQLKVRAGFD
GVLQQLPTPVEVGQKVAAGTPLGKIAQPSKLKAELKIAETQVKDVTIGQHAVIDTRNGLIEGRVSRIDPSILNGTVTVDV
ALLPTKDGPPAGVLRPDLSVDGTIELERLNDVVFVGRPVFGQQDSTVTLFKLEPDGKYANKIKVVLGRSSVNTIEIKDGL
KVGDQVILSDMSAYDSYERIKLN
>Mature_423_residues
MDIPRKDASRKRLIRRIAIGIVVIIAAVGISLGVSRLKPAAPSVDLSVVWRDTVKRGPMTREVRGLGTLVPEETMLVPAT
TEGRVQRIIIRPGTPVKADSVVMILTSPELETDLLNAEYALKAAEADYANLKVTLQKLQLDMKSTVAQVGADFNTSKLQA
DRDSALAKEGLFSEVDAKISAVKAQELGNRLDIEKERINISASAEEAQLASQKVKVDQLRGQFNLKKSQVEQLKVRAGFD
GVLQQLPTPVEVGQKVAAGTPLGKIAQPSKLKAELKIAETQVKDVTIGQHAVIDTRNGLIEGRVSRIDPSILNGTVTVDV
ALLPTKDGPPAGVLRPDLSVDGTIELERLNDVVFVGRPVFGQQDSTVTLFKLEPDGKYANKIKVVLGRSSVNTIEIKDGL
KVGDQVILSDMSAYDSYERIKLN

Specific function: Unknown

COG id: COG0845

COG function: function code M; Membrane-fusion protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45786; Mature: 45786

Theoretical pI: Translated: 9.72; Mature: 9.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIPRKDASRKRLIRRIAIGIVVIIAAVGISLGVSRLKPAAPSVDLSVVWRDTVKRGPMT
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCCCEEEEEEEHHHHCCCCC
REVRGLGTLVPEETMLVPATTEGRVQRIIIRPGTPVKADSVVMILTSPELETDLLNAEYA
HHHHHCCCCCCCCEEEEECCCCCCEEEEEECCCCCCCCCCEEEEEECCCCHHHHCCCHHH
LKAAEADYANLKVTLQKLQLDMKSTVAQVGADFNTSKLQADRDSALAKEGLFSEVDAKIS
EEECCCCCCHHEEEHHHHHHHHHHHHHHHCCCCCHHHCCCCHHHHHHHHCCHHHHHHHHH
AVKAQELGNRLDIEKERINISASAEEAQLASQKVKVDQLRGQFNLKKSQVEQLKVRAGFD
HHHHHHCCCCCCCCHHHEEEECCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCHH
GVLQQLPTPVEVGQKVAAGTPLGKIAQPSKLKAELKIAETQVKDVTIGQHAVIDTRNGLI
HHHHHCCCCHHHCCHHHCCCCCCCCCCCCHHHEEEEEEHHEEEEEECCCEEEEECCCCCE
EGRVSRIDPSILNGTVTVDVALLPTKDGPPAGVLRPDLSVDGTIELERLNDVVFVGRPVF
ECHHHHCCHHHHCCEEEEEEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCEEEECCCCC
GQQDSTVTLFKLEPDGKYANKIKVVLGRSSVNTIEIKDGLKVGDQVILSDMSAYDSYERI
CCCCCEEEEEEECCCCCCCCEEEEEEECCCCCEEEECCCCCCCCHHHHHHHHHCCCCEEE
KLN
EEC
>Mature Secondary Structure
MDIPRKDASRKRLIRRIAIGIVVIIAAVGISLGVSRLKPAAPSVDLSVVWRDTVKRGPMT
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCCCEEEEEEEHHHHCCCCC
REVRGLGTLVPEETMLVPATTEGRVQRIIIRPGTPVKADSVVMILTSPELETDLLNAEYA
HHHHHCCCCCCCCEEEEECCCCCCEEEEEECCCCCCCCCCEEEEEECCCCHHHHCCCHHH
LKAAEADYANLKVTLQKLQLDMKSTVAQVGADFNTSKLQADRDSALAKEGLFSEVDAKIS
EEECCCCCCHHEEEHHHHHHHHHHHHHHHCCCCCHHHCCCCHHHHHHHHCCHHHHHHHHH
AVKAQELGNRLDIEKERINISASAEEAQLASQKVKVDQLRGQFNLKKSQVEQLKVRAGFD
HHHHHHCCCCCCCCHHHEEEECCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCHH
GVLQQLPTPVEVGQKVAAGTPLGKIAQPSKLKAELKIAETQVKDVTIGQHAVIDTRNGLI
HHHHHCCCCHHHCCHHHCCCCCCCCCCCCHHHEEEEEEHHEEEEEECCCEEEEECCCCCE
EGRVSRIDPSILNGTVTVDVALLPTKDGPPAGVLRPDLSVDGTIELERLNDVVFVGRPVF
ECHHHHCCHHHHCCEEEEEEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCEEEECCCCC
GQQDSTVTLFKLEPDGKYANKIKVVLGRSSVNTIEIKDGLKVGDQVILSDMSAYDSYERI
CCCCCEEEEEEECCCCCCCCEEEEEEECCCCCEEEECCCCCCCCHHHHHHHHHCCCCEEE
KLN
EEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA