| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116625517
Identifier: 116625517
GI number: 116625517
Start: 8100532
End: 8101605
Strand: Reverse
Name: 116625517
Synonym: Acid_6464
Alternate gene names: NA
Gene position: 8101605-8100532 (Counterclockwise)
Preceding gene: 116625518
Following gene: 116625516
Centisome position: 81.3
GC content: 65.64
Gene sequence:
>1074_bases ATGAGCGCCATTCTTGATCGCGGCAGTCTGCTGTTCGCCAGCATCGCCGTGCTGGCCGCAACGTTGTTGCTACGGACCAG TGCGCCGTGGCTGCCCATTAGTTTCTTCACTCCGCTGCTGGTGCTCGCCGTGGTCTACGTGCCCGGCACTCTCCTGCTGG CGACGATGCTCGGGCGCCTCGGCGGTTTGGGCGTGGTCTTTCAACGTGATTATTCGCCGTTGCTCACGTGCACCGCGATG GCCTTCGCCGCCGCCGAAATCCCTGTGGCCTTCGCCGCCTGGTTCGTTCCGGCCTACTACCTCTTGATCGCCGCGGTTCT TTACTTCGCGCTGCTGATGTTCTTCGCAGTCCGCACCGTCTTCGGACTGGAGAATGGAATCGCGGCCGGCGTGGTCGCAT TCTCCTGGATCCCGCTGGTCGCTGCCGCCTTCTTGTGGGGCCCCCTGCGCGGCATCCTCGGCATGCTCGCCTCCCCCTTC TTTCTCTTCTACGCCTGGTATTACCTAGGCGGTGAACTCTCCGGCCTCGGCGCCGGAATGCGCAGCCGGCAGAATTTCAG CCGCATGCTCCACGCCGCCGCGGTCAACCAGCACGATGGGGAGGCGCAGTACCAGCTCGGCCTCATCTACCAGCAGCGCC ACCAGTACACCGAAGCCGTCGAGCGCTTCAAGAAGGCGGTGGCTATCGACCCGTCACTTACCGACGCCCACTTCCAACTA GGTCGCATCGCCCGCGAACAAGGGCGCGCGCGCGACGCCTTAGCCCATTTCCAGACGGTGATCGACCAGGACGAGCGCCA CAGTTCCAGCGAAGTGCTACGCGAACTCGGCGGCATCTACGTGGCCGCCCGCCAGTTCGCCGACGCGCGCCACGAACTCG AGATCTACACTGAGCGCCGCCCCTACGATCCCGAGGGACTCTACTACTTCGGCCAGGCGCTCGAAGGCCTCGGCGAGACC GCCGCCGCCCGCGACGCGTACGCTCGCGCCGTGGAGGCCGACCGCACCGCACCACGATATCGACGCCGTTTCACCGCGCG CTGGAGCCGCCTCGCCCAAAAGCGGCTCTCGTAG
Upstream 100 bases:
>100_bases CGGCTGATTTTCTAGCCGTCTCGATAGCAGGTGCCGCTCCCCTGCTATCCTTGCGTTTGTGTCGCTTCTCTTCCGTCTCT GGGCGCAACCCGCGGCCGCG
Downstream 100 bases:
>100_bases ATCCGAGCCGCGACCGTTCAGGGAGCGTCCTAAATACAGAAACCCCGCCGAACCCTCTCTCGTGAGGGCGCGGCGGGGCT AGATCCCCAATCAGGGCGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 357; Mature: 356
Protein sequence:
>357_residues MSAILDRGSLLFASIAVLAATLLLRTSAPWLPISFFTPLLVLAVVYVPGTLLLATMLGRLGGLGVVFQRDYSPLLTCTAM AFAAAEIPVAFAAWFVPAYYLLIAAVLYFALLMFFAVRTVFGLENGIAAGVVAFSWIPLVAAAFLWGPLRGILGMLASPF FLFYAWYYLGGELSGLGAGMRSRQNFSRMLHAAAVNQHDGEAQYQLGLIYQQRHQYTEAVERFKKAVAIDPSLTDAHFQL GRIAREQGRARDALAHFQTVIDQDERHSSSEVLRELGGIYVAARQFADARHELEIYTERRPYDPEGLYYFGQALEGLGET AAARDAYARAVEADRTAPRYRRRFTARWSRLAQKRLS
Sequences:
>Translated_357_residues MSAILDRGSLLFASIAVLAATLLLRTSAPWLPISFFTPLLVLAVVYVPGTLLLATMLGRLGGLGVVFQRDYSPLLTCTAM AFAAAEIPVAFAAWFVPAYYLLIAAVLYFALLMFFAVRTVFGLENGIAAGVVAFSWIPLVAAAFLWGPLRGILGMLASPF FLFYAWYYLGGELSGLGAGMRSRQNFSRMLHAAAVNQHDGEAQYQLGLIYQQRHQYTEAVERFKKAVAIDPSLTDAHFQL GRIAREQGRARDALAHFQTVIDQDERHSSSEVLRELGGIYVAARQFADARHELEIYTERRPYDPEGLYYFGQALEGLGET AAARDAYARAVEADRTAPRYRRRFTARWSRLAQKRLS >Mature_356_residues SAILDRGSLLFASIAVLAATLLLRTSAPWLPISFFTPLLVLAVVYVPGTLLLATMLGRLGGLGVVFQRDYSPLLTCTAMA FAAAEIPVAFAAWFVPAYYLLIAAVLYFALLMFFAVRTVFGLENGIAAGVVAFSWIPLVAAAFLWGPLRGILGMLASPFF LFYAWYYLGGELSGLGAGMRSRQNFSRMLHAAAVNQHDGEAQYQLGLIYQQRHQYTEAVERFKKAVAIDPSLTDAHFQLG RIAREQGRARDALAHFQTVIDQDERHSSSEVLRELGGIYVAARQFADARHELEIYTERRPYDPEGLYYFGQALEGLGETA AARDAYARAVEADRTAPRYRRRFTARWSRLAQKRLS
Specific function: Unknown
COG id: COG0457
COG function: function code R; FOG: TPR repeat
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39651; Mature: 39520
Theoretical pI: Translated: 9.42; Mature: 9.42
Prosite motif: PS50005 TPR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAILDRGSLLFASIAVLAATLLLRTSAPWLPISFFTPLLVLAVVYVPGTLLLATMLGRL CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH GGLGVVFQRDYSPLLTCTAMAFAAAEIPVAFAAWFVPAYYLLIAAVLYFALLMFFAVRTV CCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FGLENGIAAGVVAFSWIPLVAAAFLWGPLRGILGMLASPFFLFYAWYYLGGELSGLGAGM HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCH RSRQNFSRMLHAAAVNQHDGEAQYQLGLIYQQRHQYTEAVERFKKAVAIDPSLTDAHFQL HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH GRIAREQGRARDALAHFQTVIDQDERHSSSEVLRELGGIYVAARQFADARHELEIYTERR HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC PYDPEGLYYFGQALEGLGETAAARDAYARAVEADRTAPRYRRRFTARWSRLAQKRLS CCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SAILDRGSLLFASIAVLAATLLLRTSAPWLPISFFTPLLVLAVVYVPGTLLLATMLGRL CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH GGLGVVFQRDYSPLLTCTAMAFAAAEIPVAFAAWFVPAYYLLIAAVLYFALLMFFAVRTV CCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FGLENGIAAGVVAFSWIPLVAAAFLWGPLRGILGMLASPFFLFYAWYYLGGELSGLGAGM HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCH RSRQNFSRMLHAAAVNQHDGEAQYQLGLIYQQRHQYTEAVERFKKAVAIDPSLTDAHFQL HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH GRIAREQGRARDALAHFQTVIDQDERHSSSEVLRELGGIYVAARQFADARHELEIYTERR HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC PYDPEGLYYFGQALEGLGETAAARDAYARAVEADRTAPRYRRRFTARWSRLAQKRLS CCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA